BGIOSGA006660

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Revision as of 02:43, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006660| Description = Os02g0293500 protein| Definition = Oryza sativa Indica Group BGIOSGA006660, complete gene.| tag = OS02G0293500| tid ...")
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Gene Name

BGIOSGA006660

Description

Os02g0293500 protein

Definition

Oryza sativa Indica Group BGIOSGA006660, complete gene.

LocusTag

OS02G0293500

Ensembl Transcript ID

BGIOSGA006660-TA

Ensembl Protein ID

BGIOSGA006660-PA

Length

8009

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:11952900..11960908

Sequence Coding Region

11960417..11960908,11960082..11960143,11959893..11959993,11959348..11959427,11958824..11958874
,11957702..11957776,11957550..11957627,11956372..11956428,11955855..11955925
,11955671..11955770,11955454..11955558,11954729..11954791,11954501..11954623
,11953528..11953683,11952900..11952974

Genome Context

<gbrowseImage1> name=IndicaChromosome02:11952900..11960908 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:11952900..11960908 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCGCCGCCGCCGTCCGCTCCCGCGCCGCCGCCGTCGCGGCCACCGCGGCCCGCCGCATCCACGCGGGCCGCGCGGTGGCCGAGGAGCAGGGCCAGGGCCCCGGCCTGCGCCGCCCCTGGGCGTACTTCCGCAGGCGCCACCAGCAGCAGCAGCAGCAGGCGTCGTTGCCGCGGGCCGTCGCGGCGCCCCCGTTGCGGGGTGCGGTCGCCGAGACAGGGGCCGGCGGCGGGTCGGATGGGGGCGGGGAGCCGCCGGAGATCTGGCGGCAGCCCGGGGAGGCGCCGCCCGGCGGCGGCGCGCGCGGTGCGGAGGTGGGGAGGATCGATGTGGTTAGGGTTGCGGCGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCCAACCTGGGGCGACGGTTCCCCACGCCCAAGGAGATTTGCCGTGGGCTCGATAAGTTCGTCATCGGCCAAGAGCGCGCCAAGAAGGTACTGTCTGTAGCAGTTTATAACCACTATAAAAGGATACACTGCGAGTTACTCTCCAGCAGGTCTGCTGGAGATTGTAGTGAGACTGATTCTTGCGCGAGTGATACTGATGGAGTGGAGCTTGAGAAAAGCAACATCCTTGTGATGGGTCCGACAGGCTCGGGGAAAACATTGCTGGCAAAAACTCTTGCAAGGTTTGTGAATGTGCCATTTGTTATAGCTGATGCAACAACCCTCACTCAGGCTGGATATGTTGGCGAGGATGTTGAATCTATCCTGTATAAGCTCCTAGCGGCTGCTGATTTTGATGTAGCTGCTGCTCAGCAAGGGATTGTCTATATTGACGAAGTTGATAAAATAACAAAGAAGGCTGAAAGCATCAACCTTAGTAGAGATGTTTCAGGTGAAGGTGTTCAACAAGCACTGCTAAAAATGCTTGAGGGAACGGTCGTTAGTGTTCCTGAGAAAGGGGCTAGAAGGCACCCAAGGGGTGACAATATCCAGATTGATACAAAAAACATTCTCTTCATTTGTGGTGGTGCTTTTGTTGATTTGGAGAAGACTATTTCGGAAAGGAGACATGATTCTTCCATTGGTTTCCAAGCACCAATTCGTTCAAATATGCGGACTGGGGGTGTGACAAATGCTGAGATCACATCCTCGTTACTCGAATCAGTTGAAAGTGGTGATCTCATTGCATATGGATTGATCCCAGAATTTGTTGGTAGATTTCCCATTCTTGTTAGTCTATCTTCCCTTAGTGAAGACCAACTTGTTGAGGTTCTTACAAAACCAAAGAATGCCCTAGGCAGGCAGTACACAAAGTTGTTTGAAATGAATGATGTCAAGTTGCATTTTACTGAGAAGGCTTTACGGCTTATTTCCAAAAGAGCAATAGCGAAGAACACTGGAGCTCGAGGTTTAAGGTCAATATTAGAAAGTTTATTGACTGAATCCATGTACGAGATTCCAGAAATACGAACTGGAAAAGACAAAATAGACGCGGTTGTTGTTGACGAAGACTCTGTTGGATCTACAAATCAGCATGGTTCTGGAGCCAAGATTCTTTGTGGAGAAGGAGCATTGGACCTTTACTTGGATGAACATAATAAAGAATCAACGCTACGACGGTCGGAGAAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTCTAGAGTGGCCAGCATGTAG</cdnaseq>

Protein Sequence

<aaseq>MSAAAVRSRAAAVAATAARRIHAGRAVAEEQGQGPGLRRPWAYFRRRHQQQQQQASLPRAVAAPPLRGAVAETGAGGGSDGGGEPPEIWRQPGEAPPGGGARGAEVGRIDVVRVAAGGXXXXXXXXXXXXXXXXXSNLGRRFPTPKEICRGLDKFVIGQERAKKVLSVAVYNHYKRIHCELLSSRSAGDCSETDSCASDTDGVELEKSNILVMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLAAADFDVAAAQQGIVYIDEVDKITKKAESINLSRDVSGEGVQQALLKMLEGTVVSVPEKGARRHPRGDNIQIDTKNILFICGGAFVDLEKTISERRHDSSIGFQAPIRSNMRTGGVTNAEITSSLLESVESGDLIAYGLIPEFVGRFPILVSLSSLSEDQLVEVLTKPKNALGRQYTKLFEMNDVKLHFTEKALRLISKRAIAKNTGARGLRSILESLLTESMYEIPEIRTGKDKIDAVVVDEDSVGSTNQHGSGAKILCGEGALDLYLDEHNKESTLRRSEKVDGEPDIDTEAPSRVASM</aaseq>

Gene Sequence

<dnaseqindica>1..492#766..827#916..1016#1482..1561#2035..2085#3133..3207#3282..3359#4481..4537#4984..5054#5139..5238#5351..5455#6118..6180#6286..6408#7226..7381#7935..8009#ATGTCCGCCGCCGCCGTCCGCTCCCGCGCCGCCGCCGTCGCGGCCACCGCGGCCCGCCGCATCCACGCGGGCCGCGCGGTGGCCGAGGAGCAGGGCCAGGGCCCCGGCCTGCGCCGCCCCTGGGCGTACTTCCGCAGGCGCCACCAGCAGCAGCAGCAGCAGGCGTCGTTGCCGCGGGCCGTCGCGGCGCCCCCGTTGCGGGGTGCGGTCGCCGAGACAGGGGCCGGCGGCGGGTCGGATGGGGGCGGGGAGCCGCCGGAGATCTGGCGGCAGCCCGGGGAGGCGCCGCCCGGCGGCGGCGCGCGCGGTGCGGAGGTGGGGAGGATCGATGTGGTTAGGGTTGCGGCGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCCAACCTGGGGCGACGGTTCCCCACGCCCAAGGAGATTTGCCGTGGGCTCGATAAGTTCGTCATCGGCCAAGAGCGCGCCAAGAAGGTGAACTATTTATGCTGTTTCTCTGTGCATTCCACTCTGAGTGGAGTTGTCTTAATTTGGATTAGGGATTCAGCCTCACTTGGTACTGCAAAACAGTGTTGATAGTGTATGGGTGGGTGTAGTTTGTGCCTAATGGGATTTCTTATTCTAGTTTTGTAGGCTAGAGGTTTACGTCGTCGCTGCTTATAGCCTTACACTTATGCGATTGTAGTGACTCTTATGTGCTTTTGTCCGGTAAATCGAAACAATAAACTTGTTTTTGTCTTTTGGCAGGTACTGTCTGTAGCAGTTTATAACCACTATAAAAGGATACACTGCGAGTTACTCTCCAGCAGGTTGGTGTTGTGTAAATACCAGTTTTGCCAGACTTGCTGCGTCCTGCATATGGGTAGTTTCAGGTGGTAAATTGGATTCAAACTGTAGGTCTGCTGGAGATTGTAGTGAGACTGATTCTTGCGCGAGTGATACTGATGGAGTGGAGCTTGAGAAAAGCAACATCCTTGTGATGGGTCCGACAGGCTCGGGTACATGCTCCAATCATTCAATCTATTAGTGCTGTATGCTGCAATATTTGTAACACATAATGAAAAATTGTCTCAATGGAGAACTCGTGTGCACTATAAAAATATTCTTGTCTAAATGAATACTAGTATTTTTTATGATCAATAGTAGGCATGCATATTATTAATAATGATATGGTATAAACTTTAATATATTGTAGAAACACTTCCGATCACACCAAATTGCCAGGTGCCAGCACATGAGACCGCATTTGGAAACTTCTTAATATAGCACTAGTTGATGGTTGGTTTTTCATTTGAATCATCACTTCTTTCTTTTACAGACCATGCAATAGTATTACATCTGTACTTTATCTCTCTCATGTAGACCATTTTCTATTCAACGAATAAGATGATGGTAGATATTATTTATTTCTTATCAAATGAATGTTTTACTTATATGATTCTAAAATCTTTTCCCAAAGTCAGGGAAAACATTGCTGGCAAAAACTCTTGCAAGGTTTGTGAATGTGCCATTTGTTATAGCTGATGCAACAACCCTCACTCAGGTTAGATGAATTATCTTAATTTATCAATTCATTAACTTTGCATTTTTCCTCTTCTCCTGATATAGCATCCAATTTTTATCCATTCCTGGCTTTACTGTAAGGGGGAGCAATATCATAAGATTTCCCAAAATTATGGTACCAGTTGGATCCATGTATATATGATATGTGCTTTATACTCTTTTATGTAATTATTGTATTGTAAACGTTTTCATTACTTTCTTGGGCATAAAGTGCTTAGTATACTCATAGCCATACATGTGTTCTAAAGATTCTTTTTGCTGTAACATTACTTTTTATTATGGGTGCTGTGTTCTTAGGTGGCATATTTTAAATAGACCAATAGAGTACTTAATCGTAGTCTGGAAAATGCAATGCTTATGTTTGAGAGCGTCGTATAGCAGCTTGATTTAATAAGTGCTCATGCTGGTGCTCAGGAGTTCACCTTTTCTTTAACCATGTTTTTCCAATTGTAGGCTGGATATGTTGGCGAGGATGTTGAATCTATCCTGTATAAGCTCCTAGCGGTATGGTTAATTTCTGTGTACTGACATTGTGGCCTATATAGTCTTTCCTTTTCACTTGCATGTATTGCGATAGTTGCTTAGAGAACCTTATGATTTTTCTTCTACCATTAGCGCAAGTGTTAAACTGTTAAGACATATAATTTATCCCTCTTATTCTCTACTGAGTGCCTAAATATGTGAAGAATTGAAACAAAACTATAAAAAATCTTGAAAGCCACTATAACAATATGATATTTCAAAGTGGAGACAACCCATATTCGACATTCGAATTTGCCTCCAAGTCACAAGCTCTTATGGTACAAAAAGGGTGAAATGAGTTAAACAAGGTCGCCCTGACCCTGGGGGGAAATGCAAATTGTAAGATAGAAATTTGGATATGACTATTTTTTTAATGTTGGCAGTTATGGTAATTAAGAAAAGTTGTAATGACACCGTTGCCTGAAAATTCTAAATTTTGTGTTTTATTGACCATAGAACTGGATGTACTCAGATAAGATATTTATGTCCTTTTAGTTCTCTAAGAAAGATTTCATGTGTGTTGTGACTTAGCTAACAGACTGTTTCTATGTTAATGTGGTCATTGTTCCACATGCTCCCAACTCTAGGCATACCTGCGTGTATGTTCACAACTGCAACTATCAAGATTGTGGTCTTAACTCCAGCACATCATAAAATAACCTTTGCATAGAATTTATTACATGAATTCATTTTGGCTTTATGATCTAGAGTGAAGATGTTTTTCTTTTTTGGGTTTAAGAGATCTAAGCATCTAGCTACTATCTATTCGGGCTTTCGTGTTGGACCTGGGTTCAAGACTTCTTTAATAAGGACAGATGATTCTAATTGGCTATTTGCTAAATGATGTCTCTATAGAGGAAGCTTAGATTAATCGTAACTGCTCTTTCTAGGAGATGAATTAAGTGGTTCATTAAGCTTGTTACAGAAACTAGGACAGTGAGTTTGAAATTCCTTTCTACCAGTGCTGATGCTAGCACTCTATACCCTCTTCATTGATAGCACTTTTCCTGTTCCCTTTTGAATCCCCAGGCTGCTGATTTTGATGTAGCTGCTGCTCAGCAAGGGATTGTCTATATTGACGAAGTTGATAAAATAACAAAGAAGGTACTGATATTTTAGCTAGGGTCAATTCATCATATATTTATTGTTTGGATTTTTGAAGTTGCAGTGTCTTGCAGGCTGAAAGCATCAACCTTAGTAGAGATGTTTCAGGTGAAGGTGTTCAACAAGCACTGCTAAAAATGCTTGAGGGAACGGTGAGCTTGTCGTTATTTGTTGTTATGCTCCAATTTATACTCAAGGAACAGTCCAGTTAGGATGTTTGATTGATAGCTTGCTGATGCCAAATCTTATTTCAGATGGATTGCTAACATAGAATATGAATGGCATATTTTTACTTAACCCTGTGTGCAAAATTGTTTGTTGCTACGCTTTGCTAGTAGTACATGAGTTGGTCCAGGCTTACATTTTACTACCTCCGTTTTTATTTATTTGTCACTTGTGACCATGCATACAAACCAAATGTAAATCAACTTGTTCAAGGTAACATGACAAAAGGGCTCCTACTTGCGTGGGATGTATAATCTAGAAGCTTCTAAATATATATGCCAACTAATTATCATTTTAGACTCACAAAGGGCAAAATGGAAATAACTACATTGGTAAGTGTGTAGTGACAAGTATTTTGAAACCTTAAAGTGACCAAAGTGACATGTAAATGGAAACTGAGGGAGTAGTTAATATGCCCTGTCTAGCTGCTAAAATTTGTTGGTGGCTTCATAATGTTTTGTTATCTTGAACTATGTACTGCATGTTTTTATTGATAACCTTCTGCCTTTTGATTCTCCAGCCATGTATGCATGGCTGGAACCTGCAAAACACATTAAATTGTCCAATCCAAACCATTGAGGCAATAACTTATTTGCCTCTGATCATGTAAAATCTATTGCGAGCGCCAGTATCAATATATTTAATTTAAATGGAGTAACCAGAAGTCTATTTAAGGGGTTTTCTTGCGCTTCTTTTTAAAATTTTTATCGTTATCACTTACTCTAGCTAAGTTATTTTGCTAGTTTATGAAAATGTTGACCATACAATTCCGTAGTTCAACATGGATTAAGCCACAAAGATCAGCATACTTACTGGTCAATAAACTGTTCTTGGCCTCCTCATTGTATCTGTCATAGAGTTCGTAAAGCTGCTCTTTCCTTCAATTTTGCTGATAGGCATAGATTAATCTCTTTGAAAATCTAAGTGTTACCATGTTATTTATTTATGGGATAGCACCCTTGATTATTTTAGTATTTTTAAAAACTGATGACGCATAAGGTTTTTAATTACTGATCTTCTTACAATTGCTTTTATGCTGTCAAGATAGGTCGTTAGTGTTCCTGAGAAAGGGGCTAGAAGGCACCCAAGGGGTGACAATATCCAGGTATCCTATGAACCAATTTTGCCATATTGCTATCTATTTCATATTTGTCTGACATCAGAGAACCTCTGTTTTATTCCTTGCATCTAGTAGAAGATAGTGAATTCCCTGAGTTGAATTATCTGTTGTCTGGAAATAGACCATTTGTTTTTTGATACCTTGTGTGCTTGCTCTGCAATCTGTAGAAAAGATGCTTTGTTTTTATTAGTTTTCTTCACTTTACTACTATGAACATCTTTTCGAGCAACACTTTTGCCCTCCATGTTTAATGCAGTGCAATATAATAATGGAAATTCTCATTGCCCCTTTTAACTATGCCATGTAAACGAAAATATTTATTTACATACCTAAAATAGTGTCAACCAGTTGGCTTTTGCACAACTAGAACCTTCATATGTTCTTGTTAAACTATTTAATATGGTTTTATGCTGTTTTGTTTTGCAATGCAGATTGATACAAAAAACATTCTCTTCATTTGTGGTGGTGCTTTTGTTGATTTGGAGAAGACTATTTCGGAAAGGTTTCAATATCCTGCATCATTTATGTTTTACGCTGAAAGTCTTTCGAGTTTTCTTATTATATGTTTCACCCGAATCTTTAATAGGAGACATGATTCTTCCATTGGTTTCCAAGCACCAATTCGTTCAAATATGCGGACTGGGGGTGTGACAAATGCTGAGATCACATCCTCGTTACTCGAATCAGTGAGTGATCAAGTAGAAGAATGCATATACTTGGTTTTGTGACTTTTGTCATGCTTACATGCTAGAATCCTTTGAAATATTTAGGGTTCTTACTTTGTCGAAATATATGCAGGTTGAAAGTGGTGATCTCATTGCATATGGATTGATCCCAGAATTTGTTGGTAGATTTCCCATTCTTGTTAGTCTATCTTCCCTTAGTGAAGACCAACTTGTTGAGGTAACTTGCGATGCATTCATGTGCTGTGTCTCTTTAATTGTTCTTTCTGTCAAAGGGCACATGTTGCTTCAATTTATTATTTATTATTGTTCCAATCACAGACTGCCAATTTTTATTGGCTATCCTGCTTTCTTCAAGGTTTCTGCGTACCTTTTAAGCATTTATCCAAGAAGTATTTTAGTAGTATGTTCAGATTGGTTCTTAGTGTCATGCATATTTTTTTTTATCAACTCTACCATAATTTTCGGGTAAGATGTGCCATCATCTGCCACAAACAAAAATTGGTTCGCATGCTGCCATAATTTTCAGTTGATGAGACATACTTCAGTTACTGGCCAGTTAGTTGACTTTGTTTTATGGTTTTACCAAAATACAATCACTGTATTTTTGCCTTGTGACCGCAAAAGTTTTGCACATTGTCCATACAGGTTGATTTTGAAAAACACTGGCTATATACTCCATTAGGCATTATCTGTCTGTGAAGTGCGATATATAATAGGTCCTACGTACATAAATTAATTGTACTTTCTTAATACATTTATTCACTGCAGGTTCAAGTTTACTTGGCAACATTCAAGTTTATTTCCTTATACTTTGTTAAGCATTCTAGGTCCTACGTACATGAATTAATTGATCTTTCTTAACACATTTATTCACTGCAGGTTCTTACAAAACCAAAGAATGCCCTAGGCAGGCAGTACACAAAGTTGTTTGAAATGAATGATGTAAGCGAGTATTTCTTACAAATTCTGGAACTTTGTTTAGAGTCAGAATATTCTGAAGTATAACCATTTAATTAGTTGTTTTCATATCACATCATTGTATTATAGGTCAAGTTGCATTTTACTGAGAAGGCTTTACGGCTTATTTCCAAAAGAGCAATAGCGAAGAACACTGGAGCTCGAGGTTTAAGGTCAATATTAGAAAGTTTATTGACTGAATCCATGTACGAGGTATATATTTGTATCTTCCCGCTAGCTGAAATTTGTCAACTGAGGTTTTATAACATTTTAGGAAATCAATTTGGAACAGCATCGTGAACCTGGAATATTGTTTTTTTTTTGTATGATTCAGTTCTAGCTTTTCAGGGTCACTCAACCATTGAATTCACAAAAAAGAATGATACTCTGCCTGTTTTTGGTTCAAGTCCAATCATAAGCACTGTTTCATTAGTCAAACCAATGAAATCATGTCTGGTTTAGACTCTAGAGACATAACCCAGAAAGGAACCAAAACCAATGCCCCAGATATCCAAACTTGAATTTACTATAGGAAATTTATACATACTACCATATTGTTTTCACAATCAAAGATCTTCCCATGCGCTAAAATTCTTGGCTTGTCTTTTCTTGTGTTTCTGAACGTTAAAATTGAGTGGTAAACCTTCAAACTAGATGGAACATATTTTACTATGCAGGGAGTTAATTGTAGTGATCCCTCAATACAGCTACCTATATTTTTGGGACAAAAGGAGTAAATATCTTGTATTGAGTTACTCCCCGTTTGGCATAGCTCCAGCTCCCAACTCCAACTTACCTAGAGCTGGAGCTGTGCCAAACGGTATAGATTCTCAATATTTTGGAGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACGGGGCCTTACACTTTTGGTTGTCCGTTGGTTCCATTACATTGTTTGAGTAGGTTTTTTTTTTTTCAGTTTTACTATGTCAAAAGTCCTGTTGTTACTTAAACCATTGTAATGAACATTATTTTTTTTACAGATTCCAGAAATACGAACTGGAAAAGACAAAATAGACGCGGTTGTTGTTGACGAAGACTCTGTTGGATCTACAAATCAGCATGGTTCTGGAGCCAAGATTCTTTGTGGAGAAGGAGCATTGGACCTTTACTTGGATGAACATAATAAAGAATCAACGGTGAGCATCATCATCATTTTTCCATACACGATGTTACCTCAAAAGTCTTTCTTATGTGCACTTGACCGTTTAGCACTATTATTTAGATATGGGATGCAGCATTTAATGTTGCTCCTGTTATATTTCAGTGGCTAGACATGGGGTTGCAGACATTAGAGGCATGCTAATTCAGCAGTTTTTATTGGCTAGTTTATTTTGTGAATTCCCCTGCTGGCCTGTTCACCTCAGAATACCTAAAGATGACTTCTAGTTACTGGTAGAAATATACGTTGAAAATGTTAAAGAACCAATCAGTCGTTACATTCCCCTTGAGCCTTACATGCTAGTGGTGATATTTAATACATCATGTTTATCAGTTTTCTTCATCACTCCTGATTTTTCAGTAGAGACAACGATTGATATGTATATAGTATATTTTTTGGGAGAACAAGCAAACAGTTGCATCACTTATCATGGTAGTGTCGTATTGTTTAATTAGTAAGACCAGCCTTTGTATTTCTGGTTGGTCTCCATCTTCACTTATTTGTACGCTCCTAAAAGATTTACGTTTCAGCTACGACGGTCGGAGAAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTCTAGAGTGGCCAGCATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006660

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