BGIOSGA006667

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Revision as of 02:43, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006667| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006667, complete gene.| tag = OJ1086_...")
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Gene Name

BGIOSGA006667

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006667, complete gene.

LocusTag

OJ1086_G08.6

Ensembl Transcript ID

BGIOSGA006667-TA

Ensembl Protein ID

BGIOSGA006667-PA

Length

4947

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:11795082..11800028

Sequence Coding Region

11799483..11800028,11798597..11798791,11797796..11797825,11796603..11797715,11795082..11795633

Genome Context

<gbrowseImage1> name=IndicaChromosome02:11795082..11800028 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:11795082..11800028 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGATCGGGCGAGGCGGCGGGGGCGGTGAGGTCGTCGTCGGATCAGGGGAACAGCCGCAAGAAGCCGCGGTTCGACGCGGGGGAGGAGGAGGAGGAGGAGCTCGCCCGGATGCCGCTCGCCGACGCCTTCGTCGGCGCCGGCAGCAGCGGGGACGGGGACGGCGCGGCGGCGGGGGCGGGGGGTTGCGCCGCCGCCCCGAGCGTGGAGCTCCTGGACATCGTGCAGCACCCGCTCCCGGGCTACGGGGCGCCCGTGGCGCTTAGCTTCAGCCCCGACGACCGCCGGGTGGCCTTCCTGTACAGCCCCGACGGCACGCTTCACCGGAATGTGTACGCCTTCGACCCCGCGCAGCGGCGCCAGGAGCTCCTCTTCGGGCCCCCCGACGGCGGCGGCCTCGAGGAGGGGAACCTCTCCGCCGAGGAGCGCCTCCGCCGCGAGCGCGCACGGGAGCGCGGCCTCGGCGTCACGCGCTACGAGTGGCGCGCCCGCCTCCCCGGCACCCCCGCCTCCCGCGCCGGCATTGTCGTGCCGCTCCCCTCTGGGGTTTACTTCCAGGATTTGTCTGGTGCTGAACCTGTACTCAAGCTGCAAAGTTCAGCCACATCCCCCATCATTGACCCACATCTGTCTCCAGATGGGAGCATGATTGCGTATGTGCGGGATGATGAGTTGCATACAGTGGGGTTCTCTGATGGGCAAACTACCCAGTTGACCTATGGTGCAAGCGAAAGTGGGAAGATCCACGGACTTGCTGAGTATATTGCACAGGAAGAGATGGAAAGGAAGATGGGATTCTGGTGGTCTCCTGATAGCAAACACCTTGCATTTACTGAAGTTGACTCATCTGAAATCCCACTGTATAGAATTATGCACCAGGGTAAAAGTTCGGTTGGTCCAGATGCTCAAGAAGATCATGCTTACCCCTTTGCAGGGGCTGCTAATGTCAAAGTGCGCCTTGGAGTTGTTTCTTCCCATGGAGGAGAAATAACTTGGATGGATCTCCTATGTGGAGAACCAAATAGTATCCATGGTGATGAAGAATATCTTGCTAGAGTAAACTGGATGCATAATAGTGCTATTGCTGTTCAAGTTCTCAATAGAACTCACTCAAAACTTAAGCTACTTAAGTTTGACATCGCTTCAGGTAAAAGGGAGGTCATACTAGAGGAAGAGCATGATACGTGGATAACATTGCACGATTGTTTTACTCCTCTGGATAAAGGAGTGAATAGTAAACATCCAGGTGGATTTATTTGGGCCAGTGAGAAGACAGGATTTAGACACCTGTATCTTCATGACAAGAATGGTGTGTGCTTGGGGCCCCTCACACAAGGTGATTGGATGATCGACCAAATTGCTGGTGTCAATGAGAGTTCTGGAGTTATATATTTTACAGGCACATTGGATGGGCCATTGGAGACAAATCTTTACTCCACCAACCTATTTCCGGATTGGAGCCTTCCCTTGCAAGTCCCCAAGAGGTTGACTCATGGCACAGGACGTCATTCAGTAATTCTTGACCATCAGTTGCTGAGGTTTATTGATGTGTATGACTCAATAAAATCTCCACCTGTGATCCTGCTATGCTCTTTGCTTGATGGAAGTGTGATAATGCCTCTATATGAGCAGCCTCTGACTGTTCAGCCGCTTAAAAAGTTTCAGCAGCTGTCTCCAGAGATAGTACAGATTGAAGGAAAGGATGGGACTGCTTTATATGGAACTCTTTATCTCCCTGATGAGAAAAAATATGGACCACCCCCATACAAAACACTCGTTAACGTTTATGGCGGTCCCAGTGTCCAGCTTGTAAGTGACTCATGGATAAGTACAGTTGACATGAGAGCTCAGTTCCTGCGTAGTAAGGGTATATTAGTTTGGAAGATGGACAATCGAGGAACCGCAAGACGCGGTTTGCAGTTTGAGGGACAGCTCAAATACAACATCGGTCGTGTCGATGCTGAAGATCAGTTAGCAGGTGCCGAGTGGCTAATAAAGAAAGGCCTAGCAAAACCCGGACATATAGGTCTCTACGGCTGGAGCTATGGTGGCTTTCTCTCGGCAATGTGCCTCGCGAGATTTCCCGACACGTTCAGTTGTGCAGTTTCTGGCGCTCCGGTGACAGCATGGGATGGGTATGACACTTTCTATACCGAGAAGTACATGGGTCTGCCCTCGGAGCAGCGCGACGCTTACAGATACGGGTCGATCATGCATCATGTGAAGAACCTCCGAGGGAGGCTGCTGCTGATCCACGGTATGATAGACGAGAACGTGCATTTCAGGCACACGGCGAGGCTCATCAACTCGCTGATGGCGGAGGGGAAGCCCTACGATATCCTCCTCTTCCCCGACGAGAGGCACATGCCGCGCCGGTTAGGGGACCGGATCTATATGGAAGAGAGGATCTGGGATTTTGTAGAGAGGAACCTGTGA</cdnaseq>

Protein Sequence

<aaseq>MRSGEAAGAVRSSSDQGNSRKKPRFDAGEEEEEELARMPLADAFVGAGSSGDGDGAAAGAGGCAAAPSVELLDIVQHPLPGYGAPVALSFSPDDRRVAFLYSPDGTLHRNVYAFDPAQRRQELLFGPPDGGGLEEGNLSAEERLRRERARERGLGVTRYEWRARLPGTPASRAGIVVPLPSGVYFQDLSGAEPVLKLQSSATSPIIDPHLSPDGSMIAYVRDDELHTVGFSDGQTTQLTYGASESGKIHGLAEYIAQEEMERKMGFWWSPDSKHLAFTEVDSSEIPLYRIMHQGKSSVGPDAQEDHAYPFAGAANVKVRLGVVSSHGGEITWMDLLCGEPNSIHGDEEYLARVNWMHNSAIAVQVLNRTHSKLKLLKFDIASGKREVILEEEHDTWITLHDCFTPLDKGVNSKHPGGFIWASEKTGFRHLYLHDKNGVCLGPLTQGDWMIDQIAGVNESSGVIYFTGTLDGPLETNLYSTNLFPDWSLPLQVPKRLTHGTGRHSVILDHQLLRFIDVYDSIKSPPVILLCSLLDGSVIMPLYEQPLTVQPLKKFQQLSPEIVQIEGKDGTALYGTLYLPDEKKYGPPPYKTLVNVYGGPSVQLVSDSWISTVDMRAQFLRSKGILVWKMDNRGTARRGLQFEGQLKYNIGRVDAEDQLAGAEWLIKKGLAKPGHIGLYGWSYGGFLSAMCLARFPDTFSCAVSGAPVTAWDGYDTFYTEKYMGLPSEQRDAYRYGSIMHHVKNLRGRLLLIHGMIDENVHFRHTARLINSLMAEGKPYDILLFPDERHMPRRLGDRIYMEERIWDFVERNL</aaseq>

Gene Sequence

<dnaseqindica>1..546#1238..1432#2204..2233#2314..3426#4396..4947#ATGCGATCGGGCGAGGCGGCGGGGGCGGTGAGGTCGTCGTCGGATCAGGGGAACAGCCGCAAGAAGCCGCGGTTCGACGCGGGGGAGGAGGAGGAGGAGGAGCTCGCCCGGATGCCGCTCGCCGACGCCTTCGTCGGCGCCGGCAGCAGCGGGGACGGGGACGGCGCGGCGGCGGGGGCGGGGGGTTGCGCCGCCGCCCCGAGCGTGGAGCTCCTGGACATCGTGCAGCACCCGCTCCCGGGCTACGGGGCGCCCGTGGCGCTTAGCTTCAGCCCCGACGACCGCCGGGTGGCCTTCCTGTACAGCCCCGACGGCACGCTTCACCGGAATGTGTACGCCTTCGACCCCGCGCAGCGGCGCCAGGAGCTCCTCTTCGGGCCCCCCGACGGCGGCGGCCTCGAGGAGGGGAACCTCTCCGCCGAGGAGCGCCTCCGCCGCGAGCGCGCACGGGAGCGCGGCCTCGGCGTCACGCGCTACGAGTGGCGCGCCCGCCTCCCCGGCACCCCCGCCTCCCGCGCCGGCATTGTCGTGCCGCTCCCCTCTGGGGTTCGTATCTCTCAAACCGCAAACCCTTTCCCCCATTTAGTTCTTCCTTGATTTATATTATTACCAATTCAGTTGAGTTAGTAACTTAGTATTAGATGATACGCATTGCCCTAATCAAATTCGGTAGTTTTATACTTTTATCCTTGTGTATTGGACCACTTTCTCGGATTAAGGATTTGGTATGAGGTTGACATTCTGATTTTGCTATCAGCAACTGCACATGGATAGGCTTAGGCTCATTAATTTCCGTTTCGAGTGTTGAATTAATGGAAGGCTGGTATTGGTTTTGTGGGGCAGTGTTGGGTGACCATTATTATGGTTCTGGTTTGGATGTCGCGGGATGAGCCATATTTGCTCTGTAGTCGTTAGTGATGGCTATGAAGTTGAGTTTATCAGTGCCTGCAGGTCTGTGCTTGAGATCGCACTTCCTGCATTCTTGGTATAGTGCTGCATCTTGTATTGGTGGATTAGGTAGCTGACATGTTCCTAAATAGTGATCTCGCTACTGATTCAAAGAAATAAAACTCCTCTGTTGTGTTGATTATTGTCATCTATGGTTAGTTTTGTGTTGTCAGCGTATCATGGATATTCTTTTTCTGGTAGTTTTTGATGTTTCAGATAACCTTTGTAAATTTTCAAGGATGCTAAATATCATGAGTTTCATGGAAATATATCTTTTCTATTTCCATAGGTTTACTTCCAGGATTTGTCTGGTGCTGAACCTGTACTCAAGCTGCAAAGTTCAGCCACATCCCCCATCATTGACCCACATCTGTCTCCAGATGGGAGCATGATTGCGTATGTGCGGGATGATGAGTTGCATACAGTGGGGTTCTCTGATGGGCAAACTACCCAGTTGACCTATGGTGCAAGCGAAAGTGGGAAGGTACTTCTTTGGAGTTCTGTTAATGATACTCACATTTTAATAGGAATATGTGTGCATTGTGTTGTTTGTTATCATACCAAGTCTTGTTGAGCAGGTTGCAAAGAAAAGTTTCATGTTGACTTTCTAGAAGTTTATTAGCTTTATTCTTGGCATGTAACCCAACATGACTATCATTGGAACTAGCATGTAACCCAACATGACTATCATTGGAACTAAGCAATATATTGATTTTTTTTGTCAACAATATATTCAATGTGTTATAGTTCAAATATTTCTTTCTACCTCTTGGTAGGGATTGTTTTTTGGTTGAACCAAAGTAAGCTTAATCCATAGCCAAAGTCCAAACAGTGGGATATTTACCTTCCAAAGACACACAGCAGCCGAAACTATTGCAGGAGGCTGGCGGTGTTTATAAAGACTACAAGTTTTATAAGTTAGTCTTTTAACCAAACTTTAGAGGGTGTTCTAGTTAACTGCCGCCATTAGTGCTATGGCTCAAATAAGCTTCTAGGATAAACTTGCCTGCTAAAAGAACTTTATGTTCCCCTTTACCAATAATATCTCATAGTTTTTATTAGCTTACCCATGTAGCATGTATATTATGCTATCAGTATTCTTCTAACATTCAAAACATGCTGAGTTGTGCATTAGTAGTTGCATGATCAACAGAAATATATACCGGGGATTAAATAAAGTATGCAAGATCATACATCATGTGTTGTTACTGCAACTTCAGAATCTAACATTTGTACTTGTTTCTTTTTTTCCCAGATCCACGGACTTGCTGAGTATATTGCACAGGTGCACATGTTGATCCATTAGGATTGGTATGGAATTTGTTTTGATGGCTGCTGCCTAATATTTTGTATCTCCCATTGTAGGAAGAGATGGAAAGGAAGATGGGATTCTGGTGGTCTCCTGATAGCAAACACCTTGCATTTACTGAAGTTGACTCATCTGAAATCCCACTGTATAGAATTATGCACCAGGGTAAAAGTTCGGTTGGTCCAGATGCTCAAGAAGATCATGCTTACCCCTTTGCAGGGGCTGCTAATGTCAAAGTGCGCCTTGGAGTTGTTTCTTCCCATGGAGGAGAAATAACTTGGATGGATCTCCTATGTGGAGAACCAAATAGTATCCATGGTGATGAAGAATATCTTGCTAGAGTAAACTGGATGCATAATAGTGCTATTGCTGTTCAAGTTCTCAATAGAACTCACTCAAAACTTAAGCTACTTAAGTTTGACATCGCTTCAGGTAAAAGGGAGGTCATACTAGAGGAAGAGCATGATACGTGGATAACATTGCACGATTGTTTTACTCCTCTGGATAAAGGAGTGAATAGTAAACATCCAGGTGGATTTATTTGGGCCAGTGAGAAGACAGGATTTAGACACCTGTATCTTCATGACAAGAATGGTGTGTGCTTGGGGCCCCTCACACAAGGTGATTGGATGATCGACCAAATTGCTGGTGTCAATGAGAGTTCTGGAGTTATATATTTTACAGGCACATTGGATGGGCCATTGGAGACAAATCTTTACTCCACCAACCTATTTCCGGATTGGAGCCTTCCCTTGCAAGTCCCCAAGAGGTTGACTCATGGCACAGGACGTCATTCAGTAATTCTTGACCATCAGTTGCTGAGGTTTATTGATGTGTATGACTCAATAAAATCTCCACCTGTGATCCTGCTATGCTCTTTGCTTGATGGAAGTGTGATAATGCCTCTATATGAGCAGCCTCTGACTGTTCAGCCGCTTAAAAAGTTTCAGCAGCTGTCTCCAGAGATAGTACAGATTGAAGGAAAGGATGGGACTGCTTTATATGGAACTCTTTATCTCCCTGATGAGAAAAAATATGGACCACCCCCATACAAAACACTCGTTAACGTTTATGGCGGTCCCAGTGTCCAGCTTGTAAGTGACTCATGGATAAGTACAGTTGACATGAGAGCTCAGTTCCTGCGTAGTAAGGGTATATTAGTTTGGAAGGTAACTATTCTTTCCTCTATTTTTTTTTCTTTGCTCTTTGTTTAACAAGATAGATTCCGATTGAGGATTTTTTTTTTCTGTTTTCACTTTGGTCCATAATGTCACCAATCTTAAGGTATGCTGTGCAATGCATTGCATGGGTAAAATTCTAAACTAAAAATGATTTTAAATAAACTTATGGCCAAGATAGCACCATTTAATTTCTTTTTGTTTAACAAGGTATGCTGTGCAATGCATGGCATCTCATCCATTAATTTTTCCAAAGCACATCAGTATGTCATTTTGAGAGTTAACATGGACTCAACCTCAGATAATGCAATAGTGCATTCAAGCATAAAATTTGCGTTGAGTCAGAAATATTAGCACCACTCCACTAAGCTAATAAGGGTTCCTGCGTCCACAACTATGTCTGGAAAATATTGGCGCCTGTAACCTTCCTGTCATTAGGAATTAGCAAAACATTACAAGTGTCCAAAAAAGCCCCATGTAATTATCCTAAGTGACGTGTGGGTTGAAAAGCCCAATACAATCCAGCAGCCAATATTTTTTATTGTAGTAATGTCTGTCAGTTGCAAGCAAACAATTATACTACCCCCTATCCCTAGCGACTATGGCAAGTGGTAAGATTGATGATACAATCCATCATGACTAACCATATTGCTTCTTGAGCAAAAATAATCTAAAGTTTTAAGGTGGGAATTTTGAAGTGGAAGCAAAATGTTTTGGAACGGATGTTTCTATAATCATATATTTACATGAGTTTTTTTTTTTGCTTAGAATTATTCATATATGATAAATTTATGCTGGCTGCTATATGCCTATATATTTCCGCATTTGTTGATTGCTCATTATGGAGTATAATCATATGCCTATATATTTCCGCATTTGTCACTACATTTATCATTGGGCTCATGAGCCATGGCAATACAAGTTGTTTGTAACACTGAATGACTGACTGTCTCCTGGCAGATGGACAATCGAGGAACCGCAAGACGCGGTTTGCAGTTTGAGGGACAGCTCAAATACAACATCGGTCGTGTCGATGCTGAAGATCAGTTAGCAGGTGCCGAGTGGCTAATAAAGAAAGGCCTAGCAAAACCCGGACATATAGGTCTCTACGGCTGGAGCTATGGTGGCTTTCTCTCGGCAATGTGCCTCGCGAGATTTCCCGACACGTTCAGTTGTGCAGTTTCTGGCGCTCCGGTGACAGCATGGGATGGGTATGACACTTTCTATACCGAGAAGTACATGGGTCTGCCCTCGGAGCAGCGCGACGCTTACAGATACGGGTCGATCATGCATCATGTGAAGAACCTCCGAGGGAGGCTGCTGCTGATCCACGGTATGATAGACGAGAACGTGCATTTCAGGCACACGGCGAGGCTCATCAACTCGCTGATGGCGGAGGGGAAGCCCTACGATATCCTCCTCTTCCCCGACGAGAGGCACATGCCGCGCCGGTTAGGGGACCGGATCTATATGGAAGAGAGGATCTGGGATTTTGTAGAGAGGAACCTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006667