BGIOSGA006682

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Revision as of 02:44, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006682| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006682, complete gene.| tag = OsI_067...")
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Gene Name

BGIOSGA006682

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006682, complete gene.

LocusTag

OsI_06780

Ensembl Transcript ID

BGIOSGA006682-TA

Ensembl Protein ID

BGIOSGA006682-PA

Length

3486

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:11569598..11573083

Sequence Coding Region

11572236..11573083,11570061..11571687,11569721..11570009,11569598..11569629

Genome Context

<gbrowseImage1> name=IndicaChromosome02:11569598..11573083 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:11569598..11573083 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGTTGGCGACGGGTGCACTGCCAAGCGTCATCGCCAAGCTAGGTGATCTGCTCGTCGGCGAGTACAATCTGCAGAAGGCGGTCAAGGGGGAGATCAGGTTCCTCCAATCCGAGCTTGAGAGCATGCAGGGCGCCCTCGCCAAGGTCTCCGCCACGCCGGCCGACCAGCTTGATCCCCAGGACAAGATCTGGGCCAGGGATCTCAGAGAGCTCTCCTTCGACATCGAGGACACCATCGACGCGTTCGTCGTGCGCGACATCGGCAACGACAACGGGGACGGTGAGGCCAAACCACGGGGCATCAGCAAGCTAATCGATAGAAGTGTCGGCCTATTCAGGAAGGCCAAGGCTCGCCATGGGATTGCCTCTGAGATCATGGACATCAAGAGCCGCGTCGTCGAGGTTCACGAGCGTCGCCGCAGGTATGAGATCAACATTGGTGCTGGTGGTGGTGATAAGACCGCTACAATTGACCCTCGTTTATTCACGCGGTACACGGATGCGAAAGAGCTTGTTGGCATCGGTGAGACGAGAGATGAGCTGATCAAGATTCTGACGGAAGAGAATGGAGTGTCCATGCAGCGAGCAGGCAAGGTGGTTTCCATTGTTGGATTCGGGGGATTGGGAAAAACAACTCTCGCTAATGCAGTATATGAAAAGATTAGATCACTGTTCGATTGCTGTGCTTTCGTATCAGTGTCTCAAACTCCTGACTTGAAGAAATTGTTCATGGACATCATTTATCAACTTGACAAGGAGAAATATAAAGATCTCAATGAAAAACCATTGGATTTGGATGAGGTGCAGCTCATCAATGAACTCAGAGAATTCCTTCAACAGAAAAGGTATTTCATTGTTATGGATGACATATGGGATATCTCAATATGGAAAATGATTAAATGTGCTTTGCCTGATAATGATGTTGGATACAAAATCATTACAACAACACGTATTTCTGAGGTTGCTGAAAAAGCTGGTGGTGTTTACAAGTTGAAACATCTTTCTTTAAATAACTCTCGACGATTACTATATGGAAGAATATTTGGTAACTGTGAAGACACAGAAAAATGTCCTGATGAGGAGTTGGCTGAAGTATCCGAGAGAATACTAAAGAAATGTGCTGGTGTTCCATTAGCTATCATTACGATGGCTAGTCTGCTGGCTTGTAAAGCAAGAAATAAGATGGAGTGGTACAAGGTGTACAACTCGGTTGGTACTGGTCTCGAGAATAGTCTGGATGTTAAGAATATGAGAAAGATCTTGTCATTTAGCTATTATGATCTGCCACCCCATTTGAGAACTTGCTTATTATATTTAAGTGTGTTTCCGGAAGATTACAAAATCGAAAAAGATCGTTTGATATGGATGTGGGTAGCTGAAGGCTTTATCCAGTGTGGGAAACATGGGAGGAGCCTATTTGAACTCGGAGAGAGTTACTTCAATGACCTTGTAAATAGAAGTATGATCCAACCCATATATGACATGTATACTGACATGGTATCTGAGTGTCGCGTACACGATATGGTCCTCGATCTTATCTGCTCATTGTCAAGTGAGGAAAACTTTGTTACTATATTAAATGGTAGGGATCAAGGATCTCTGTCATACACGATTCGGAGGTTGTCCCTCCAAAATGGCAATGAAGATCATGCTATGACTTCAGCAACTCGGAGCTTGCAGCAAGCAAGGACAGCTCTTGTCTTTCCATCTGCCATTGATCTAGTACCTGTCCTTAGGAGCTTCCGAGTTTTACGTGTACTGGATTTACAAGGTTGTGATCTTTCACAAGGTTACAGCCTTAAGTACGTTGGGAATTTATTTCACTTGAGGTATCTAGGACTACGTGACACACATATTAGAGAGGCCCCAGAAGAAATAGGAAACATACAGTTTCTACAAACTTTGGACCTGAGGGAAAACCCTATTTGTGACTTGCCACTGAATATTGTGAAGCTCAGACATTTGACGTCCCTGTGCTTCGACGGGTTTGCGAGAGTGCCAGATGGGATTGGAAGCCTAACAATGCTTGAACATCTAGCAAATGTGTTGATCGATTGTGCTACTGTGGGCATGATGGAAGAGCTGGGCAACCTAACGGAGCTGAGGGTGCTGTGCATCATCTTCTGGGACGGATGGAACGACAAGCTGCTGGGTCTCCTACAAAAGTTGCACAAGATCCAGCGTCTCTCCATCGACGTCTGCATGAGCAATGTTCGAAAGAACATCGGTGGTTTGGACGCCTGGGTCGCCCCTCGCCATCTCGTCGCACTGAAGACAGAGAATATCTGCTGGTTCTCGTCGCTGCCGGCGTGGACGATGAATCCGTCGCATGTCCCAAACCTCCGCTCGCTATCCATCGCCGTGAGGGAGATCCGGCAGGCCGACGTTGAGACCCTCGGGAGGCTGCCTGCTCTCCGCGATCTGCAGCTGCAGGTGGACCACGAGGAGCTCGGAATCCGCGGGGTGGTGTTGGGATTCGTTGGGCCGGCGGTGTTCCGGCGAGGAGCAATGCCGAGGCTCAGAACGCTTCGCTCCCGGTTCTCCGTGCGGGAGGCGATCGCCGTCGCCGGCGCCGGCGCCGGCGACGATGGGGGTGGTGGCCGTCTCGACTTGGGACTGGGGAACTTGCCATCGCTCCAGGAGGTCAATGTCTCGTTGGATTGTGAAGGCGCCAGCGAGGAGGAGGTGAAGGAATTGAAGGCTGCGCTGAGGCGTGCCACCAAGATCCATCCGAATCATCCAAGCATTAGCATTGACGGAGATGGCCAAGTTTCAGATGACGAGCGCGAATAG</cdnaseq>

Protein Sequence

<aaseq>MELATGALPSVIAKLGDLLVGEYNLQKAVKGEIRFLQSELESMQGALAKVSATPADQLDPQDKIWARDLRELSFDIEDTIDAFVVRDIGNDNGDGEAKPRGISKLIDRSVGLFRKAKARHGIASEIMDIKSRVVEVHERRRRYEINIGAGGGDKTATIDPRLFTRYTDAKELVGIGETRDELIKILTEENGVSMQRAGKVVSIVGFGGLGKTTLANAVYEKIRSLFDCCAFVSVSQTPDLKKLFMDIIYQLDKEKYKDLNEKPLDLDEVQLINELREFLQQKRYFIVMDDIWDISIWKMIKCALPDNDVGYKIITTTRISEVAEKAGGVYKLKHLSLNNSRRLLYGRIFGNCEDTEKCPDEELAEVSERILKKCAGVPLAIITMASLLACKARNKMEWYKVYNSVGTGLENSLDVKNMRKILSFSYYDLPPHLRTCLLYLSVFPEDYKIEKDRLIWMWVAEGFIQCGKHGRSLFELGESYFNDLVNRSMIQPIYDMYTDMVSECRVHDMVLDLICSLSSEENFVTILNGRDQGSLSYTIRRLSLQNGNEDHAMTSATRSLQQARTALVFPSAIDLVPVLRSFRVLRVLDLQGCDLSQGYSLKYVGNLFHLRYLGLRDTHIREAPEEIGNIQFLQTLDLRENPICDLPLNIVKLRHLTSLCFDGFARVPDGIGSLTMLEHLANVLIDCATVGMMEELGNLTELRVLCIIFWDGWNDKLLGLLQKLHKIQRLSIDVCMSNVRKNIGGLDAWVAPRHLVALKTENICWFSSLPAWTMNPSHVPNLRSLSIAVREIRQADVETLGRLPALRDLQLQVDHEELGIRGVVLGFVGPAVFRRGAMPRLRTLRSRFSVREAIAVAGAGAGDDGGGGRLDLGLGNLPSLQEVNVSLDCEGASEEEVKELKAALRRATKIHPNHPSISIDGDGQVSDDERE</aaseq>

Gene Sequence

<dnaseqindica>1..848#1397..3023#3075..3363#3455..3486#ATGGAGTTGGCGACGGGTGCACTGCCAAGCGTCATCGCCAAGCTAGGTGATCTGCTCGTCGGCGAGTACAATCTGCAGAAGGCGGTCAAGGGGGAGATCAGGTTCCTCCAATCCGAGCTTGAGAGCATGCAGGGCGCCCTCGCCAAGGTCTCCGCCACGCCGGCCGACCAGCTTGATCCCCAGGACAAGATCTGGGCCAGGGATCTCAGAGAGCTCTCCTTCGACATCGAGGACACCATCGACGCGTTCGTCGTGCGCGACATCGGCAACGACAACGGGGACGGTGAGGCCAAACCACGGGGCATCAGCAAGCTAATCGATAGAAGTGTCGGCCTATTCAGGAAGGCCAAGGCTCGCCATGGGATTGCCTCTGAGATCATGGACATCAAGAGCCGCGTCGTCGAGGTTCACGAGCGTCGCCGCAGGTATGAGATCAACATTGGTGCTGGTGGTGGTGATAAGACCGCTACAATTGACCCTCGTTTATTCACGCGGTACACGGATGCGAAAGAGCTTGTTGGCATCGGTGAGACGAGAGATGAGCTGATCAAGATTCTGACGGAAGAGAATGGAGTGTCCATGCAGCGAGCAGGCAAGGTGGTTTCCATTGTTGGATTCGGGGGATTGGGAAAAACAACTCTCGCTAATGCAGTATATGAAAAGATTAGATCACTGTTCGATTGCTGTGCTTTCGTATCAGTGTCTCAAACTCCTGACTTGAAGAAATTGTTCATGGACATCATTTATCAACTTGACAAGGAGAAATATAAAGATCTCAATGAAAAACCATTGGATTTGGATGAGGTGCAGCTCATCAATGAACTCAGAGAATTCCTTCAACAGAAAAGGTATATATGGAAGCACATTCCTTCCACCAATCTGTACATATATATATGATGTTTTTTCTCAGCAACTAATAATTTGCTAGTATGCCATCCATTTCGTAATACTTCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTCTCATATTCATATTGATGTTAATGAATCTAGACATATATATTTATCTAGATTCATTAACACCAATATAAATGTGGAAAATGTTAGAATGATTTACATTGTGAAACGGAGGAAGTACTAATTAGCAGTCTACATACTGTTAATTGTTGAGAATGTTCATCATGTCCGGGTTAAATAAAAAAAAACTACAACTGCTTATAAGCCTTTTTACATCGTTATTGAGTCGGAATTAAATAGCTATGTCCAAATCTTCTTTTCTTGAGTGAATAATTTATCTCTGTTTTGGCAAAGATTCACAATAGCTAGACTAGTTTTGCCTACGAACTTGCTAATCTACCTGGCCCCAGTATTTGAACTTCCCGTTCTAATTTCATTAGTTTTTTTCCTAATTAAGGACTTAATCTATATGCAGGTATTTCATTGTTATGGATGACATATGGGATATCTCAATATGGAAAATGATTAAATGTGCTTTGCCTGATAATGATGTTGGATACAAAATCATTACAACAACACGTATTTCTGAGGTTGCTGAAAAAGCTGGTGGTGTTTACAAGTTGAAACATCTTTCTTTAAATAACTCTCGACGATTACTATATGGAAGAATATTTGGTAACTGTGAAGACACAGAAAAATGTCCTGATGAGGAGTTGGCTGAAGTATCCGAGAGAATACTAAAGAAATGTGCTGGTGTTCCATTAGCTATCATTACGATGGCTAGTCTGCTGGCTTGTAAAGCAAGAAATAAGATGGAGTGGTACAAGGTGTACAACTCGGTTGGTACTGGTCTCGAGAATAGTCTGGATGTTAAGAATATGAGAAAGATCTTGTCATTTAGCTATTATGATCTGCCACCCCATTTGAGAACTTGCTTATTATATTTAAGTGTGTTTCCGGAAGATTACAAAATCGAAAAAGATCGTTTGATATGGATGTGGGTAGCTGAAGGCTTTATCCAGTGTGGGAAACATGGGAGGAGCCTATTTGAACTCGGAGAGAGTTACTTCAATGACCTTGTAAATAGAAGTATGATCCAACCCATATATGACATGTATACTGACATGGTATCTGAGTGTCGCGTACACGATATGGTCCTCGATCTTATCTGCTCATTGTCAAGTGAGGAAAACTTTGTTACTATATTAAATGGTAGGGATCAAGGATCTCTGTCATACACGATTCGGAGGTTGTCCCTCCAAAATGGCAATGAAGATCATGCTATGACTTCAGCAACTCGGAGCTTGCAGCAAGCAAGGACAGCTCTTGTCTTTCCATCTGCCATTGATCTAGTACCTGTCCTTAGGAGCTTCCGAGTTTTACGTGTACTGGATTTACAAGGTTGTGATCTTTCACAAGGTTACAGCCTTAAGTACGTTGGGAATTTATTTCACTTGAGGTATCTAGGACTACGTGACACACATATTAGAGAGGCCCCAGAAGAAATAGGAAACATACAGTTTCTACAAACTTTGGACCTGAGGGAAAACCCTATTTGTGACTTGCCACTGAATATTGTGAAGCTCAGACATTTGACGTCCCTGTGCTTCGACGGGTTTGCGAGAGTGCCAGATGGGATTGGAAGCCTAACAATGCTTGAACATCTAGCAAATGTGTTGATCGATTGTGCTACTGTGGGCATGATGGAAGAGCTGGGCAACCTAACGGAGCTGAGGGTGCTGTGCATCATCTTCTGGGACGGATGGAACGACAAGCTGCTGGGTCTCCTACAAAAGTTGCACAAGATCCAGCGTCTCTCCATCGACGTCTGCATGAGCAATGTTCGAAAGAACATCGGTGGTTTGGACGCCTGGGTCGCCCCTCGCCATCTCGTCGCACTGAAGACAGAGAATATCTGCTGGTTCTCGTCGCTGCCGGCGTGGACGATGAATCCGTCGCATGTCCCAAACCTCCGCTCGCTATCCATCGCCGTGAGGGAGATCCGGCAGGCCGACGTTGAGACCCTCGGGAGGCTGCCTGCTCTCCGCGATCTGCAGCTGCAGGTGGACCACGAGGAGCTCGGAATCCGCGGGGTGGTGTTGGTGATTGGATCAGCTGGCTCCTTCGCGTGCCTGGTGTGCTGTGGGTTGTAGGGATTCGTTGGGCCGGCGGTGTTCCGGCGAGGAGCAATGCCGAGGCTCAGAACGCTTCGCTCCCGGTTCTCCGTGCGGGAGGCGATCGCCGTCGCCGGCGCCGGCGCCGGCGACGATGGGGGTGGTGGCCGTCTCGACTTGGGACTGGGGAACTTGCCATCGCTCCAGGAGGTCAATGTCTCGTTGGATTGTGAAGGCGCCAGCGAGGAGGAGGTGAAGGAATTGAAGGCTGCGCTGAGGCGTGCCACCAAGATCCATCCGAATCATCCAAGCATTAGCATTGACGGAGGTACATGTGATGCTTGCTAAGCTTGCTCCTAATTGATTCTTGTCGATCTTTTGCCCTTTCTTATTCTGACGTTAATTATTTGATATTTCAGATGGCCAAGTTTCAGATGACGAGCGCGAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006682