BGIOSGA006690

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Revision as of 02:44, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006690| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006690, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA006690

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006690, complete gene.

LocusTag

OSJNBA0063E14.35

Ensembl Transcript ID

BGIOSGA006690-TA

Ensembl Protein ID

BGIOSGA006690-PA

Length

6935

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:11344778..11351712

Sequence Coding Region

11351601..11351712,11349238..11349323,11349041..11349138,11348740..11348857,11348566..11348655
,11347826..11348130,11347544..11347739,11347282..11347464,11346917..11347186
,11345735..11345980,11345157..11345269,11344946..11345060,11344778..11344855

Genome Context

<gbrowseImage1> name=IndicaChromosome02:11344778..11351712 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:11344778..11351712 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCGTCGTCGGGGAGGTCGAGCCGGATCGCGGTGGTGACGGAGGACCGGTGCCGGCCCAGCAAGTGCGGCCAGCAGTGCCGCAAGCGCTGCCCCGTCAATGCCACCGGGCGTCAGTGCATAGAAGTTACTCCATCATCGAGAGTATCCTTAATTTCTGAGGAACTATGTATTGGATGTGGTATTTGTGTGAAGGTATGTCCCTTTGATGCTATCCAGATTATAAACTTGCCAAGTGATCTTGACAAGGAGACGACACATCGCTATGGACCAAATTCATTTAAGCTTCACAGGCTGCCTGTTCCAAGACCAGGGCAAGTGTTGGGCTTGGTAGGGACAAATGGTATTGGTAAATCAACGGCACTTAAAATTTTGGCAGGGAAGGTGAAACCCAACTTGGGTAAATTCACAGATCCTCCAAATTGGGATGAAATTCTGAGGAATTTCCGTGGATCTGAACTCCAGAAATACTTTACTCGTCTGCTGGAAGACAAAATGAAGGCAACAATGAAACCACAATACCTTGATCACATTCCTAAATCTGTTAAAGGGAAGGTTGGAGATCTTCTTAGCAAGAAAGATGAGAGACATATGAAAAACCTACTGTGTGATACTCTCGAATTGAATCAAGTTCTTGACCGAGATATCTCAGCTCTATCTGGTGGTGAACTCCAGAGATTTGCAATAGCTGCCCGTGCTATGGAAGAAGCAGATGTTTATATGTTTGATGAGCCATCCTGCTATCTTGATGTGAAGCAAAGGCTGAAAGCTGCACAAGTTATTCGCTCTTTGCTTCAGCCCAAAAACTATGTAATTGTTGTGGAGCATGATCTTAGCATACTGGACTACCTATCAGACTATATATGCTGTCTTTATGGGACTCCTGGAGCATATGGTGTTGTTACTTTTCCCTCTTCTGTTAGAGAAGGAATCAACATTTTCCTGAATGGCTTTATACCAACAGAAAACCTACGTTTCCGCGAGGAGAAACTTACATTTAGAGTTACCGAGTCTACTGAGGAAATCGTAGAGGGTCAGACATACCAATGCTACCAATATCCTACAATGACAAAGACAAGGTGTGGCTTTAAGCTATCAGTCACTGAAGGCAGCTTTAATGATTCCCAGATAATTGTAATGCTTGGTGAGAATGGTACTGGGAAGACGACATTTATCCGTATGCTGGCAGGACGAGTGAAGCCAGACAAAGTAGGAGACGAAGAAGTTGACGTGCCTGAATACACTGTCTCATACAAGCCTCAGGAATTGATATCTAAATATAGCTCTACAGTGAGGGATCTTCTATTCGAGAAAGTACCTGGATCATGCACTCAAGCCCAGTTCAGATCTGATGTCATGAAACCACTGAAAATTGAGCAACTCATGGACAGGCAGGTTCCAACTCTTTCTGGAGGGGAGCTGCAAAGGGTTGCGCTTTGTCTTTGTCTTGGGAAGCCTGCTGATATTTACCTCATAGATGAACCAAGTGCCCATCTTGATTCAGAGCAGCGCCTTCTTGCAGCAAAGGTCATAAAAAGATTTATCCTCCATGAAAAGAAAACTGCTTTTGTTGTTGAGCACGATTTTATCATGGCAACCTACCTTGCTGATAAGGTGGTTGTTTTTGAGGGAAAACCTTCTGTTGACTGTATTGCAAATGCACCAGAACCCCTGGCCTCTGGGATGAACCGTTTTCTTTCGCATCTTGATGTCACCTTTAGGAAAGATCCTACAACCTACAGGCCTAGGATCAACAAGCTAGGTTCTATCAAAGATGCTGAGCAGAAAGCTGCAGGATGTTACTACTACCTTGAAAAGCTTTCGCAAGGGGCAACTCTACTTCTGCAAAAGCTCCTTCGGAGCAGAACAGCTCGGCTCGCGTTATCGTACACATACTTGCACGCATACATGAGTCTGCCAGTGCTCTCGGAATGTTTTGGCACGGCACCAGGATATGGCCCGGAACTTCGTGGGCAGGATCGATTTGAAATGGCATCTGAAATCTAA</cdnaseq>

Protein Sequence

<aaseq>MSSSSGRSSRIAVVTEDRCRPSKCGQQCRKRCPVNATGRQCIEVTPSSRVSLISEELCIGCGICVKVCPFDAIQIINLPSDLDKETTHRYGPNSFKLHRLPVPRPGQVLGLVGTNGIGKSTALKILAGKVKPNLGKFTDPPNWDEILRNFRGSELQKYFTRLLEDKMKATMKPQYLDHIPKSVKGKVGDLLSKKDERHMKNLLCDTLELNQVLDRDISALSGGELQRFAIAARAMEEADVYMFDEPSCYLDVKQRLKAAQVIRSLLQPKNYVIVVEHDLSILDYLSDYICCLYGTPGAYGVVTFPSSVREGINIFLNGFIPTENLRFREEKLTFRVTESTEEIVEGQTYQCYQYPTMTKTRCGFKLSVTEGSFNDSQIIVMLGENGTGKTTFIRMLAGRVKPDKVGDEEVDVPEYTVSYKPQELISKYSSTVRDLLFEKVPGSCTQAQFRSDVMKPLKIEQLMDRQVPTLSGGELQRVALCLCLGKPADIYLIDEPSAHLDSEQRLLAAKVIKRFILHEKKTAFVVEHDFIMATYLADKVVVFEGKPSVDCIANAPEPLASGMNRFLSHLDVTFRKDPTTYRPRINKLGSIKDAEQKAAGCYYYLEKLSQGATLLLQKLLRSRTARLALSYTYLHAYMSLPVLSECFGTAPGYGPELRGQDRFEMASEI</aaseq>

Gene Sequence

<dnaseqindica>1..112#2390..2475#2575..2672#2856..2973#3058..3147#3583..3887#3974..4169#4249..4431#4527..4796#5733..5978#6444..6556#6653..6767#6858..6935#ATGTCGTCGTCGTCGGGGAGGTCGAGCCGGATCGCGGTGGTGACGGAGGACCGGTGCCGGCCCAGCAAGTGCGGCCAGCAGTGCCGCAAGCGCTGCCCCGTCAATGCCACCGGTATACACGTTTTTTTTTTTTTTTTTTTTTGGGTTTATATGTGCTTGTGCCGCCGCGCGATTATTCCAATCTGGTCTCGCTGTTGTTGATGATCTCTGCTTTGCGCTAGCTGCCTCGGGGGTTTTGGGTAGAGAAGCGGCAATTGGTATGGCTGCCTTGGGATTTTAGGTTGGTTTCCCTTTGTGGTTTGCATTGGTTGAGGCTGAAGCTCGATTTAATGATGCCCGTTGAGAAAAATAGTTCTAAGGATGTGGTGTGGCCTTTTGAGGAATTAGGATGGATTGTTTGCTTATAAAATTGAAATTGCAGTAGTTGAAAGGGTTTAACGATTTGTTCGTTCACCACTGCAAATCCGCAATAGGCATCTTACCTATTTTGACAAAAAGTATCATATATTATACTCCCTTCGTTTTTTAATAGATGACGCCGTTGACTTTTTCTCACATGTTTGACTATTCGTCTTATTCAAAATTTTATGCAATATATAAGATATAAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGGGGAGGTCGAGCCGGATCGCGGTGGTGACGGAGGACCGGTGCCGGCCCAGCAAGTGCGGCCAGCAGTGCCGCAAGCGCTGCCCCGTCAATGCCACCGGTATACACGTTTTTTTTTTTTTTTTTTTTTGGGTTTATATGTGCTTGTGCCGCCGCGCGATTATTCCAATCTGGTCTCGCTGTTGTTGATGATCTCTGCTTTGCGCTAGCTGCCTCGGGGGTTTAGGGTAGAGAAGCGGCAATTGGTATGGCTGCCTTGGGATTTTAGGTTGGTTTCCCTTTGTGGTTTGCATTGGTTGAGGCTGAAGCTCGATTTAATGATGCCCGTTGAGAAAAATAGTTCTAAGGATGTGGTGTGGCCTTTTGAGGAATTAGGATGGATTGTTTGCTTATAAAATTGAAATTGCAGTAGTTGAAAGGGTTTAACGATTTGTTCGTTCACCACTGCAAATCCGCAATAGGCATCTTACCTATTTTGACAAAAAGTATCATATATTATACTCCCTTCGTTTTTTAATAGATGACGCCGTTGACTTTTTCTCACATGTTTGACTATTCGTCTTATTGAAAAATTTGATGCAAATATATAAGATATAAATCACACTTTAGGTACTATGAGTGATAAAACAACTCGTAGCAAAATAAATTATAATTACGTAAATTTTTTGAATAAGACGAATGGTCAAACATGTGAAAAAAAGTCAACGGCGTCATCTATTAAAAAACGGAGGTAGTATTTGTGTTTATAGAACAAATATGGTGAGACAACAATACACGCCTGTGATGATAGAGTATCATATATTATGTGTTTATAAAACAAATGTTGTAAAAACAACCATATGCGCGATCGATATTACTTGCTAGGCTGCTTGTTTGGGATGTTTGGACTACCCTCCAGCGATGTGTTAATTCTTTAATCTAAATGTGTTGGAACATCTGGAAAGAATATTCTCCCCATTTTAAAATCTAAACAAACTAAACTAGTACCAGAGACTTCACCATTATGAACTTGTTTGGCATCGATTATTTCTTGTAATATGCATGAATATATATTTCAAATAGTCCAAATGGCATAAGGGATCCCCCTCTGTTGCAATGCCATATTTTTCTAATATCTATCTATATTCATAGATGAAATGAGCTTTATTTCATTCAAATCTGCTCCTACTTCGTGCCGGTAATAATATGCTTTGAATTAGTCATTTCGCAAAGACATCACACATGAATGAAAGCAGTGACATCCTATTAATTACCTGCTCCCAAGAGTAAGTGGGAACTTTCAGAACAATGAAAATCTTATTTTTCATGTGAACATGCTGACCTATATGTCTACTGAAGTTATTGGTTTAGTTATGCCTTCGAGTCACACACTTTAATGTAGTTAATTATTTTGGTATTCGATCTTTTTGAGATAAATTTTGAGTTTCTCAGATAAATTCATTCGTACTCTGTACACTAGGATTTATCTTTTGTTGTTCTATATCCATTAATTTTACTGCATCTGTACATTTTCCTTTTGTTGTTCTATATCCATTAATTTTACTGCATATGTACATTTTCCTTTCAGACCAAGGAAAAATTTTCCTTTCAGACCAAGGAAAAAGGCTTTTTATTTTGTTGATAGAGAAGATACAAGTATTTGTGCATGTGGCTTATGATTCTTTATCTACATTGACAGGGCGTCAGTGCATAGAAGTTACTCCATCATCGAGAGTATCCTTAATTTCTGAGGAACTATGTATTGGATGTGGTATTTGTGTGAAGGTGTAACTGCTTTTCCGCTTGGCCTTCATTTTTTTTGTATTCTCTTTCCAAATGTGCAATATTCTTAGCCTTGCTTCCTGTTTGTTATTATTATTTCAGGTATGTCCCTTTGATGCTATCCAGATTATAAACTTGCCAAGTGATCTTGACAAGGAGACGACACATCGCTATGGACCAAATTCATTTAAGCTTCACAGGTACAAAATCCTATTTTTAATACTAACCACCTAGCTTTCTTTGAGCTGTATTTGATTTTTTAACTTTTTACACTATTGTAGTAGCTTAATGTTGTTTCCATGAAACTATTACCGATACACAATGGTACGATGCTTCTCACACACAACTACCTTCCTGAAACTTGATTTGAAATTTTTTTTAAGGCTGCCTGTTCCAAGACCAGGGCAAGTGTTGGGCTTGGTAGGGACAAATGGTATTGGTAAATCAACGGCACTTAAAATTTTGGCAGGGAAGGTGAAACCCAACTTGGGTAAATTCACAGTAAGCAACACAGAGCAAGCACTATTTGTTATACTTTTTAATGGAAGTAATTGTAGGTTATGAAACTATTTATTGTGTTTGCAGGATCCTCCAAATTGGGATGAAATTCTGAGGAATTTCCGTGGATCTGAACTCCAGAAATACTTTACTCGTCTGCTGGAAGACAAAATGAAGGTACATTACAGAATTTATCAGAAAATTTCCCCTACAGATGTAAAATTACAATGTTCTGTTTTCTGGTGCATATATGGTTATTACCTGTTCCCTCATTTGACTTATCATTTATCAATCATCAATATTTGACTAAATTTGGAATGCGTTAGATGGAATTCGAATATAGTTGGAATGCAGATGTAATGTAACTATTTAGGATATTTCCCTTAAACATGTTCAGTTCTAGAATTTGTTTCTTAGTCACATATCATCCAAATTATTCATTGCTCTGATGATCATAGTTCAAGTATTTAAATCATTTCATTTATCCAGAAGCTAAATACTGATGTGGAAGATTTAACTGCCATTTAACTTGCTTTATAGTTGTACTTACATAGTAATGGTCAGATTTGTTACTGTGACACATTCTGTCTAATGTGTTCTAATTGGTTACAGGCAACAATGAAACCACAATACCTTGATCACATTCCTAAATCTGTTAAAGGGAAGGTTGGAGATCTTCTTAGCAAGAAAGATGAGAGACATATGAAAAACCTACTGTGTGATACTCTCGAATTGAATCAAGTTCTTGACCGAGATATCTCAGCTCTATCTGGTGGTGAACTCCAGAGATTTGCAATAGCTGCCCGTGCTATGGAAGAAGCAGATGTTTATATGTTTGATGAGCCATCCTGCTATCTTGATGTGAAGCAAAGGCTGAAAGCTGCACAAGTTATTCGCTCTTTGCTTCAGCCCAAAAAGTAAGAAGAGCCCCATTTGACCAAATCAGAACATTTAAACTGCACACTTTGCATTTGACAAGCAAGTTTTCCTTTACTTTTTGCAGCTATGTAATTGTTGTGGAGCATGATCTTAGCATACTGGACTACCTATCAGACTATATATGCTGTCTTTATGGGACTCCTGGAGCATATGGTGTTGTTACTTTTCCCTCTTCTGTTAGAGAAGGAATCAACATTTTCCTGAATGGCTTTATACCAACAGAAAACCTACGTTTCCGCGAGGAGAAACTTACATTTAGAGTAAGGGCTATGATTATGAGCACCATAACTTCAATTCTTATGTGTTCTGACTCTAATGCAATGCTATTTGCTTCCTTAGGTTACCGAGTCTACTGAGGAAATCGTAGAGGGTCAGACATACCAATGCTACCAATATCCTACAATGACAAAGACAAGGTGTGGCTTTAAGCTATCAGTCACTGAAGGCAGCTTTAATGATTCCCAGATAATTGTAATGCTTGGTGAGAATGGTACTGGGAAGACGACATTTATCCGTATGCTGGTACACACCTTATTTTTGTCAAATATATTTTGCAGTAATACGAAGATCTCTACTTTTGATTATAACCCTCAAGATTGTTCTTATCTGAATTTCAGGCAGGACGAGTGAAGCCAGACAAAGTAGGAGACGAAGAAGTTGACGTGCCTGAATACACTGTCTCATACAAGCCTCAGGAATTGATATCTAAATATAGCTCTACAGTGAGGGATCTTCTATTCGAGAAAGTACCTGGATCATGCACTCAAGCCCAGTTCAGATCTGATGTCATGAAACCACTGAAAATTGAGCAACTCATGGACAGGCAGGTTCCAACTCTTTCTGGAGGGGAGCTGCAAAGGGTTGCGCTTTGTCTTTGTCTTGGGAAGGTAATAACTTCGGATTACCCAGCTACAGTCTCTTTTCAAATCATTGTTGTGGGTAGAAAAGTTCCTTATGTATTTTAAGCCCTTCAGATGTTAGACAATAATACCTTGTTTGCATTAACCCAATGCTTTATTTTGAGAAGAAACCAGGACCTTTATATCTCAAAAATTCATTTAGGCTGTATAGCGCTTGTTTCTCAAGGAAAGAAGATCTGTGCACTACTACACACTCTGCAAAATCAACTATCTTTCATTCGCTACATTCTTTTTCCACATCAATCATATCTAAGTGCTTATGTTGTTCCATATACTTTGTGGACGAAAATTAATTAATCACATCAACAATAGGAGGGCAAGTTTACTTTGCTACTTTTATGATGAACTTTACTGTATGTTTTAAACTTTCAAGCATAGACTATGTGTTGCACTATTTCTGTGTCCTCCTGACCAAACTCTCCCACAAGCATCAGTGATGAGTTTATTATTCATCAATATCTCTACAACTTAGGTGGGAAAATAGTTTGACAATACTGATTCGCAATGCCTAGAATTGCATATTATATTTTGTGGATTGTTGGTACATTTTTCTTCTCCATTTTTCCTTCGAGGAAACTAGATGAGCCATAATAGTATATAATTATATTATTTTTAAACAACACTGCAGCACATTTGTCTAGGCTATGAAGCTGACACATATTTCTTTAACTATTGTAAGAACGTTCTCAGGTTTTGACAGCAGATCAAGGAGAAAAGAGAACAACTACCAGTACATTCTTTCTATTAAACATGTTTATTGTTAATGATGCATATAGATTGTAATTTAAACCATGAATCCCTAGTTAGAAAAGTTTATGCTCAAGGAATATAGTCTATATAACTATTGGTCATCTCGACAGTGCATCAATAAGTATTGATTTTTACATGGCATTTGATTTGCAGCCTGCTGATATTTACCTCATAGATGAACCAAGTGCCCATCTTGATTCAGAGCAGCGCCTTCTTGCAGCAAAGGTCATAAAAAGATTTATCCTCCATGAAAAGAAAACTGCTTTTGTTGTTGAGCACGATTTTATCATGGCAACCTACCTTGCTGATAAGGTGGTTGTTTTTGAGGGAAAACCTTCTGTTGACTGTATTGCAAATGCACCAGAACCCCTGGCCTCTGGGATGAACCGTTTTCTTTCGGTAAGTTCAAATTCCTCTTTCTATGCCTCCTGTGTTATGCCGATTGAGGATAGTGGATAGCCCTAAAAATTTTCATGCAAAGGTTTTCTGATATGCAACACTTCTTGGAATTTAAATAACATGGACATAGTCAAGTGATAAGTACTACGTACTGAATACTACCTCCGTCCCAAAATAAGTGCAGTTTTGTACTATTCACGTTCAACGTTTGACCGTCCGTCTTATTTGAAACATTTATGAAAAAATTAAAAACATTTAGTCACACATAAAGTACTATTCATGTTTTATCATCTAATAGCAATAAAAATACTAATTATAAAAAAATTTCAAATAAGACGGACGGTCAAACGTTGAACGTGAATAGTGCAAAACTACACTTATTTTGGGACGGAGGGAGTATTTCGGACGGTATTATAAGCATTTTAATGGGAAAGTACTTGAATTTAATTTCTCTGCGTTCCACAGCATCTTGATGTCACCTTTAGGAAAGATCCTACAACCTACAGGCCTAGGATCAACAAGCTAGGTTCTATCAAAGATGCTGAGCAGAAAGCTGCAGGATGTTACTACTACCTTGAGTATTAACGTAAGATAAAATTCTCCCTCTCTCTATGCTAGTCATCTAACAACACCGCAATAGCATGTCGTTCATGTACTTTTCCTTGTGTTCACAGAAAGCTTTCGCAAGGGGCAACTCTACTTCTGCAAAAGCTCCTTCGGAGCAGAACAGCTCGGCTCGCGTTATCGTACACATACTTGCACGCATACATGAGTCTGCCAGTGCTCTCGGTATGTCTTTGCACTGTTTTCCAATAAGCAATATAGTAGATGCTCTTTGATGTTTAAATTGACATGCAGATTGGTCATCTATCTTTACAGGAATGTTTTGGCACGGCACCAGGATATGGCCCGGAACTTCGTGGGCAGGATCGATTTGAAATGGCATCTGAAATCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006690