BGIOSGA006711

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Revision as of 02:44, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006711| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006711, complete gene.| tag = P0413A1...")
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Gene Name

BGIOSGA006711

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006711, complete gene.

LocusTag

P0413A11.14-1

Ensembl Transcript ID

BGIOSGA006711-TA

Ensembl Protein ID

BGIOSGA006711-PA

Length

3577

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:10789295..10792871

Sequence Coding Region

10791270..10792871,10790658..10790747,10790391..10790572,10789985..10790105,10789666..10789734
,10789295..10789390

Genome Context

<gbrowseImage1> name=IndicaChromosome02:10789295..10792871 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:10789295..10792871 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCATGGCGCCCCTCTTCGTTCCTCCTCCTCATCTCCTCTTCCTCCTCCCAGCCACCACCTCATCATCCCCCGCTGCTTCCCTCAGGCGACTCCTCCTCCCGCCGCTCTCGTGCCACGCGCGCCAGGTGCTCGACGTAATGCCCCAGGGAGACCGCGTCGCCGGCCCGAGAGCCGCCGAGGGAGCTGGCGCTAAAGGCGCGACGGCGCAGGTCGGCGTGGCCACACGGGAGGCCGGCACGGTGGGGCGGCATGGGCGGGGCCGTCATGGCGGCGGCGCGAGGCCGTGGAGGAGAGGGGAGGACAGGCCCGCGCGCGGAGGACAACATGCCGCCGACGACGGGGAGGTTCAGGGAACGAGGAGGGGTGGGGATCTCAAACAACGCAGGGAGGGCAGGCGCTGGACGAGAGGCGAAACGCAAGCGCGGGAATCTGGAAAGGCTGGAAATTCGGGGAGAGGCCAGAGTAACGCTAGTGGTGGCAATGCCAGCAGGAAGGGGAAGAAGAAAGCCAAGGGTGGTGAGAACGAAGTCAAGCTGAGAGTCGAGCTGGACATGTGCTCGAAGAGGGGAGACGTGATTGGAGCCATCAACCTGTATGATTCTGCGGTGAAGGAAGGGATCAAAATGGGGCAGCATCACTACAGCGTGCTCCTTTACCTGTGTTCTTCCGCGGCGCTTGGGTTTGTGCAACCGGCGAAAAGTGGCAATGCCGGTAGTGGGATTGCTAGTATTGGGCAGTTACATTCATCGTCTACTCAAAGCGTGGGAAATTTGGAGGGAGACGATGTACAATCTGAAGGCCACTCTGAAGATCAGGAGGGAAACAAGACCGATTTGTTTGCTTCGGATGATGGGACGGAGAAACCGAGTCGAATTCCAGTGAGTGATGAGCTGAGGGAGTATGCAAGAACTCGAGGGTTTGAGATATTTGAGAAGATGCGCTCGGAGGAAGAGAAAGTTCCCATGAATGAGTCTGCTCTGACTGCAGTGGCTCGTATGGCGATGTCCATGGGCAACGGTGACATGGCCTTTGATGTTGTGAAGCAAATGAAGGATCAAGGTATTGCGCCAAAGTTGCGGTCATATGGTCCTGCTTTGACGGCATTCTGCAATAGCGGCAATGTTGAGAAAGCATTTGAGGTGGAAGCACATATGTTGGAGTCTGGTGTCAGACCTGAAGAGCCTGAGTTGGAGACACTTCTCAAGGCTAGTGTGGCCGCACAACAAGGAGACAAGGTTTATTATTTGTTGCATAAGTTCAGGACTACTGTCAGACAAGCATCTTCAACCACAGCTAAACTACTTGAGGATTGGTTTCAGAGCCCAACAGCATCTAAAGTGGGGAAGAGAAAATGGGATGCAGGTGCTATAACAAAAGCTATTGAGAACAATGGTGGGGGTTGGCATGGGTTAGGATGGTTAGGAAGGGGGAAATGGACCATATCACACTCGCACATCGACAGGAATGGTGCATGCCTTGCTTGTGGAGAAAAATTGACTATTATAGATCTTGATCCAAAAGAAACAGAAGATTTTGCCACATTGGTGGCAAAATTAGCTATCAAAAGAGAGAGGAGATCAAACTTTGATAACTTTCAGAAATGGTTGGAAAAGCATGGCCCTTTTGATGCAGTTGTGGATGGTGCCAACGTTGGCCTTTTTAGCCATAAGCATATTTCCTTGAGTAAGATTAATATTGTTGCTGATGTTATACGGCAAAGATTTCAATCAAGAAAGCTCCCTTTGATAGTTGTGCATAACCGACATCTCACTGGAGAGCGCATGCAAAAGCCTTCTAATCGTAAGTTGGTGGAAAAGTGGAAGCTTTCTAATGCTATTTATGCAACCCCTACTGGCTCAAATGATGATTGGTACTGGTTGTATGCTGCTATCAGATGCAAATGCTTGATGGTTACCAATGATGAAATGAGAGACCACACATTTCAGCTCTTGGAAAGAGATTTCTTCCCCAAATGGAAGGAAAGGCATCAGGTACGCTTCAATTTTGAGGACAGTTGTGTTACACTTCAAATGCCTCCTCCTTGCTCAGTTGTAATTCAGGAATCTGAGAATGGTCAGTGGCATATCCCTGTTGTCTCTGAGGAAGGTTCACTAGAGAAGGACCGGACCTGGTTATGTGTCACGAGGCGCAACTGA</cdnaseq>

Protein Sequence

<aaseq>MAMAPLFVPPPHLLFLLPATTSSSPAASLRRLLLPPLSCHARQVLDVMPQGDRVAGPRAAEGAGAKGATAQVGVATREAGTVGRHGRGRHGGGARPWRRGEDRPARGGQHAADDGEVQGTRRGGDLKQRREGRRWTRGETQARESGKAGNSGRGQSNASGGNASRKGKKKAKGGENEVKLRVELDMCSKRGDVIGAINLYDSAVKEGIKMGQHHYSVLLYLCSSAALGFVQPAKSGNAGSGIASIGQLHSSSTQSVGNLEGDDVQSEGHSEDQEGNKTDLFASDDGTEKPSRIPVSDELREYARTRGFEIFEKMRSEEEKVPMNESALTAVARMAMSMGNGDMAFDVVKQMKDQGIAPKLRSYGPALTAFCNSGNVEKAFEVEAHMLESGVRPEEPELETLLKASVAAQQGDKVYYLLHKFRTTVRQASSTTAKLLEDWFQSPTASKVGKRKWDAGAITKAIENNGGGWHGLGWLGRGKWTISHSHIDRNGACLACGEKLTIIDLDPKETEDFATLVAKLAIKRERRSNFDNFQKWLEKHGPFDAVVDGANVGLFSHKHISLSKINIVADVIRQRFQSRKLPLIVVHNRHLTGERMQKPSNRKLVEKWKLSNAIYATPTGSNDDWYWLYAAIRCKCLMVTNDEMRDHTFQLLERDFFPKWKERHQVRFNFEDSCVTLQMPPPCSVVIQESENGQWHIPVVSEEGSLEKDRTWLCVTRRN</aaseq>

Gene Sequence

<dnaseqindica>1..1602#2125..2214#2300..2481#2767..2887#3138..3206#3482..3577#ATGGCCATGGCGCCCCTCTTCGTTCCTCCTCCTCATCTCCTCTTCCTCCTCCCAGCCACCACCTCATCATCCCCCGCTGCTTCCCTCAGGCGACTCCTCCTCCCGCCGCTCTCGTGCCACGCGCGCCAGGTGCTCGACGTAATGCCCCAGGGAGACCGCGTCGCCGGCCCGAGAGCCGCCGAGGGAGCTGGCGCTAAAGGCGCGACGGCGCAGGTCGGCGTGGCCACACGGGAGGCCGGCACGGTGGGGCGGCATGGGCGGGGCCGTCATGGCGGCGGCGCGAGGCCGTGGAGGAGAGGGGAGGACAGGCCCGCGCGCGGAGGACAACATGCCGCCGACGACGGGGAGGTTCAGGGAACGAGGAGGGGTGGGGATCTCAAACAACGCAGGGAGGGCAGGCGCTGGACGAGAGGCGAAACGCAAGCGCGGGAATCTGGAAAGGCTGGAAATTCGGGGAGAGGCCAGAGTAACGCTAGTGGTGGCAATGCCAGCAGGAAGGGGAAGAAGAAAGCCAAGGGTGGTGAGAACGAAGTCAAGCTGAGAGTCGAGCTGGACATGTGCTCGAAGAGGGGAGACGTGATTGGAGCCATCAACCTGTATGATTCTGCGGTGAAGGAAGGGATCAAAATGGGGCAGCATCACTACAGCGTGCTCCTTTACCTGTGTTCTTCCGCGGCGCTTGGGTTTGTGCAACCGGCGAAAAGTGGCAATGCCGGTAGTGGGATTGCTAGTATTGGGCAGTTACATTCATCGTCTACTCAAAGCGTGGGAAATTTGGAGGGAGACGATGTACAATCTGAAGGCCACTCTGAAGATCAGGAGGGAAACAAGACCGATTTGTTTGCTTCGGATGATGGGACGGAGAAACCGAGTCGAATTCCAGTGAGTGATGAGCTGAGGGAGTATGCAAGAACTCGAGGGTTTGAGATATTTGAGAAGATGCGCTCGGAGGAAGAGAAAGTTCCCATGAATGAGTCTGCTCTGACTGCAGTGGCTCGTATGGCGATGTCCATGGGCAACGGTGACATGGCCTTTGATGTTGTGAAGCAAATGAAGGATCAAGGTATTGCGCCAAAGTTGCGGTCATATGGTCCTGCTTTGACGGCATTCTGCAATAGCGGCAATGTTGAGAAAGCATTTGAGGTGGAAGCACATATGTTGGAGTCTGGTGTCAGACCTGAAGAGCCTGAGTTGGAGACACTTCTCAAGGCTAGTGTGGCCGCACAACAAGGAGACAAGGTTTATTATTTGTTGCATAAGTTCAGGACTACTGTCAGACAAGCATCTTCAACCACAGCTAAACTACTTGAGGATTGGTTTCAGAGCCCAACAGCATCTAAAGTGGGGAAGAGAAAATGGGATGCAGGTGCTATAACAAAAGCTATTGAGAACAATGGTGGGGGTTGGCATGGGTTAGGATGGTTAGGAAGGGGGAAATGGACCATATCACACTCGCACATCGACAGGAATGGTGCATGCCTTGCTTGTGGAGAAAAATTGACTATTATAGATCTTGATCCAAAAGAAACAGAAGATTTTGCCACATTGGTGGCAAAATTAGCTATCAAAAGAGAGAGGAGATCAAACTTTGATAACTTTCAGGTCATCTATCTCTGAACACCGTAAATGCTATTTTTACTAGGCTTTGCATTTACCAATACATGTCATCAATATTATGCCTTGATTAAATTACACTAAATATTTCCGTAAGTGTAGATTGAAGCCAAGGTTTACAGCATGAAAGGATACAAAATTAGATGGGTTTTCAATATTGAGTAAATTATGTATGCTCAGAATTATATCCAATTGTAAACTAAATATAAATATAACAATTCTCCATCTCATTTTGTATATTTAATGAATACTGTGCATTATTTTATTAAGCAGTGTGCAAACTAGAAAATTTCATATGCCACAATATCTTAGTTTCTCTTTATTGCAATTAATTTTTAGCCAACTTGCAGCCTCTTTGTTGGAAAAAGAATTATCATCTTTAAATCATAAATAGTTCTTACAGCGTGTGAATCATGATCAATAGAGCTTTCCAGTGGTGTGTGTAGTCCATATCCTTTCTCTTAATTAACCATTTAGCTTGACTTTTTCGCTGTATTTTTCTATATTCAGAAATGGTTGGAAAAGCATGGCCCTTTTGATGCAGTTGTGGATGGTGCCAACGTTGGCCTTTTTAGCCATAAGCATATTTCCTTGAGTAAGGCATGTATATTGTGATAAATATTTTCTTCTTCTTGTATAACATATATCTAAAATACTAGGCCTCTATCTTTTTTTAACTGGACAGATTAATATTGTTGCTGATGTTATACGGCAAAGATTTCAATCAAGAAAGCTCCCTTTGATAGTTGTGCATAACCGACATCTCACTGGAGAGCGCATGCAAAAGCCTTCTAATCGTAAGTTGGTGGAAAAGTGGAAGCTTTCTAATGCTATTTATGCAACCCCTACTGGCTCAAATGATGATTGGTAAGCTTTTCTACTTTTTAGATGCTATAGGAAGCTGTACAGCAACTGTCCCCCCTGAAGATTGAAAATTAGTTCTCCTTATTTAATGTGTCTACTATTTATGATATATCTGAATTTTCCATTTTCTCAATGTTTTGAATATTGATGTACAACTTGTCTCTGATAAACCATTGCATTAGTTGCTCCTTAGAAGGAGTTGTTTTAGTTATTTGCCTTCCACAGCTGAAGTTTTGAAAATCTTCATCTGTATATGTACAATATGTAATATTTTGGCATATAGTTCAGGTACTGGTTGTATGCTGCTATCAGATGCAAATGCTTGATGGTTACCAATGATGAAATGAGAGACCACACATTTCAGCTCTTGGAAAGAGATTTCTTCCCCAAATGGAAGGAAAGGCATCAGGTGTGGATCTGTTTTGGTGATATTTGTTTATACCTTTTAAGTAAATTTAGAAAATATGATAATGCCAAGAAGTTATCAAGGGTTGACGTGCTACATAGTTTTACCCTGAAACCTCGAGAGAAATATACTTATCTTATTTTATTTAAGATTCACTCTGCAAATATACATCTGTATGAACACTTTCAATATATCTATAGATCATTGTGTACTCGCAACAGAGCTCATTTTATGGTGTCATCTTCACTAACAGGTACGCTTCAATTTTGAGGACAGTTGTGTTACACTTCAAATGCCTCCTCCTTGCTCAGTTGTAATTCAGGTTTGAATTTAACTACTGAAGAAATATTATATTTTCGTATTGTGTAGACATACCATGGTATTTGACTGAAAAATTAAGTGAACTGGCCGTAATATCTCTAGTTCAGATTTGACCTTCAGTTGTCAAGAATTGCCTGAACTAGCCCCTATTTATGCACAAAAACGATCTTCATTGCTATTAAAGCCTTCAATCAGTTGCATGTAATTGTAGCCTTTTAAATTTTTGTTATCTGGGCAGACTTCATAATTATTCCATCTGTTCTCTGTGAAACTCAGGAATCTGAGAATGGTCAGTGGCATATCCCTGTTGTCTCTGAGGAAGGTTCACTAGAGAAGGACCGGACCTGGTTATGTGTCACGAGGCGCAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006711