BGIOSGA006722

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Revision as of 02:44, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006722| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006722, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA006722

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006722, complete gene.

LocusTag

OSJNBA0033K18.27

Ensembl Transcript ID

BGIOSGA006722-TA

Ensembl Protein ID

BGIOSGA006722-PA

Length

3416

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:10592293..10595708

Sequence Coding Region

10595637..10595708,10595438..10595529,10595225..10595322,10594954..10595109,10594217..10594842
,10593984..10594051,10593448..10593711,10593219..10593336,10592926..10593097
,10592293..10592843

Genome Context

<gbrowseImage1> name=IndicaChromosome02:10592293..10595708 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:10592293..10595708 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATTCGAGATCAGCTTTGCTACTACTTGTTCTGCTAGTTTCCCCCTTTTTCACCAATGCATCGAGCAGACTCTACATCGTGTACATGGGGGAGAAGAAGCATGATGATCCGTCTGTTGTCACGGCATCGCATCATGACACGCTTACTTCTGTTCTTGGGAGTAAGGATGGCGCCATGAAGTCTATAGTGTACAGTTACAAACATGGGTTCTCTGGATTTGCAGCGATGCTCACCGAATCCCAAGCTGAGGAACTTGCAAGATTACCTGAAGTCATCAGCGTGAAGCCTAACACTTACCATCAAGCACAAACGACTCGAAGCTGGGATTTTCTCGGCCTTAACTACAACGAACAATCAGGTCTTCTAAAGAAAGCAAAGAACGGTGAAGATGTCATTGTCGGTGTCATCGATTCAGGTATATGGCCCGAATCACGAAGCTTCGATGACAATGGCTACAGTCCCGTGCCAGCACGATGGAAGGGCAAGTGCCAGACCGGCGCGGCGTTCAACGCCACCACGGGTTGCAACAGGAAGATCATCGGCGTACGATGGTACTCGGGCGGCATTCCCGACGAGAACCTGAAGGGCGAGTACATGTCGGCGAGGGACCTCGGCGGCCACGGCACGCACGTCGCCTCGACGATCGTCGGCGGGCAGGTACGGAACGTGAGCCACAGACAGGGCGGCGCCCTGGCTGCCGGCACGGCGCGCGGTGGGGCGCCGCGCGCGCGGGTCGCGGTCTACAAGGTGTGCTGGGGCCTGCGCGCCCAGTGTGGCGGAGCCGCGATCCTCGCCGCCATCGACGACGCCATGAACGACGGCGTGGATGTGCTGTCCCTGTCGATAGGAGGCGCGGGCGAGCATTACGAGACGCTCCACGCCGTGGCGAGAGGGATCCCCGTCGTGTTCGGTGGCGGGAACGACGGCCCCACGCCGCAGATCGTGAGGAACACCGTGCCGTGGGTCATCACGGTGGCCGCCTCCACGATCGACAGGGCCTTCCCCACGGTGATATCGCTCGGGAACAACAAGAAATTTGTGGGGCAATCTCTTTACTACAATGCAACAGCAAGCAGCACCAAATTTCAAATGCTTGTTGATGGATCAAGCTGCGACACGCAGACGTTGGCGTCGATCAACATCACCAGCAAGGTCGTGCTGTGCTCGCCGCCGTCGCTGATGCCACCTCGGCTGTCGCTGGGCGACATCATCGGCCGTGTCATCAAGGCAGGCGCCAATGGCCTCATCTTCGTGCAGTACTCCGTCAGCAACGCCCTTGATTTTCTGAATGCCTGCAGCCGCGCCAGCGTGCCATGTGTACTGGTGGACTACGAGATCACACGCAGGATCGAGTCATACATGACCAGCACAAGCACGCCCATGGTGAAGGTGTCGTCGGCCATGACGGTGGTCGGGAGTGGGGTGCTCTCACCAAGGATCGCTGCATTCTCGTCAAGAGGACCGAGCTCCTTGTTTCCCGGAATACTGAAGCCTGATATTGCTGCGCCGGGAGTCAGTATCCTCGCAGCTGTGGGTGATTCGTACGAGCTCAAGTCTGGGACGTCCATGGCGTGCCCGCATGTATCAGCAGTGGTGGCGTTGCTCAAGATGGTTCACCCGGACTGGTCGCCTGCCATGATCAAGTCCGCCATCGTCACTACTGCTTCGGTGACAGATCGTTTTGGCATGCCAATCCAAGCTGAGGCAGTGCCAAGGAAAGTGGCTGACCCATTCGACTTCGGTGGTGGCCACATCGAACCGAATAAAGCCATTGACCCTGGCCTAGTATATGACATTGATCCAAGCCACTACACTAAGTTCTTCAACTGCACCCTTCCTGAAGCTGAGGATGACTGCGAGTCCTACATGGAGCAAATCTATCAGCTCAACCTCCCGTCAATTGCAGTGCCAAACCTAAAGGACTCTGTCACGGTTTGGCGGACTGTCACCAATGTTGGAGAAGCAGAAGCAACTTACCATGCAGCGCTTGAGGCACCGGTTGGTATGACTATGTCAGTGGAACCTTCGGTGATCACATTCACTAGGGGTGGTAGTAGAAGTGTAACATTTAAGGTGACATTCACAACAACACAGAGAGTACAAGGTGGCTACACGTTTGGGAGTTTGACATGGCTAGATGGTAACACACACTCTGTGAGAATTCCGATTGCAGTTCGCACCATAATCCAGGACTTTGTTGCTGATACTTCATAA</cdnaseq>

Protein Sequence

<aaseq>MDSRSALLLLVLLVSPFFTNASSRLYIVYMGEKKHDDPSVVTASHHDTLTSVLGSKDGAMKSIVYSYKHGFSGFAAMLTESQAEELARLPEVISVKPNTYHQAQTTRSWDFLGLNYNEQSGLLKKAKNGEDVIVGVIDSGIWPESRSFDDNGYSPVPARWKGKCQTGAAFNATTGCNRKIIGVRWYSGGIPDENLKGEYMSARDLGGHGTHVASTIVGGQVRNVSHRQGGALAAGTARGGAPRARVAVYKVCWGLRAQCGGAAILAAIDDAMNDGVDVLSLSIGGAGEHYETLHAVARGIPVVFGGGNDGPTPQIVRNTVPWVITVAASTIDRAFPTVISLGNNKKFVGQSLYYNATASSTKFQMLVDGSSCDTQTLASINITSKVVLCSPPSLMPPRLSLGDIIGRVIKAGANGLIFVQYSVSNALDFLNACSRASVPCVLVDYEITRRIESYMTSTSTPMVKVSSAMTVVGSGVLSPRIAAFSSRGPSSLFPGILKPDIAAPGVSILAAVGDSYELKSGTSMACPHVSAVVALLKMVHPDWSPAMIKSAIVTTASVTDRFGMPIQAEAVPRKVADPFDFGGGHIEPNKAIDPGLVYDIDPSHYTKFFNCTLPEAEDDCESYMEQIYQLNLPSIAVPNLKDSVTVWRTVTNVGEAEATYHAALEAPVGMTMSVEPSVITFTRGGSRSVTFKVTFTTTQRVQGGYTFGSLTWLDGNTHSVRIPIAVRTIIQDFVADTS</aaseq>

Gene Sequence

<dnaseqindica>1..72#180..271#387..484#600..755#867..1492#1658..1725#1998..2261#2373..2490#2612..2783#2866..3416#ATGGATTCGAGATCAGCTTTGCTACTACTTGTTCTGCTAGTTTCCCCCTTTTTCACCAATGCATCGAGCAGAGTAAGATGCTTCCTTCTTTCAGGAAAAATGTAATTTAATTTGCCTAGATTTTTCCTCAGGAAAGTTACTGATACTGATTCATGAAACCTTTTACATCGAAATTTCAGCTCTACATCGTGTACATGGGGGAGAAGAAGCATGATGATCCGTCTGTTGTCACGGCATCGCATCATGACACGCTTACTTCTGTTCTTGGGAGGTACAAGGAGTTCAAGTCCTAACTTCTTATAAATTTTACCGAGCACGGCAAGCGATAGAACTGGTTGCTCATGTTTAATTTTGTGGTTTTTTTGTCAATATATGCAACATAACAGTAAGGATGGCGCCATGAAGTCTATAGTGTACAGTTACAAACATGGGTTCTCTGGATTTGCAGCGATGCTCACCGAATCCCAAGCTGAGGAACTTGCAAGTTAGTAATCATCAAAGCTACAAATTATAATATTGGCACTAGCATGTTGTGTCAGTGCTACTATTTGCTTGCATGATTATTAATTAACAAACTTAATTATGAATTCCTGGTGCAGGATTACCTGAAGTCATCAGCGTGAAGCCTAACACTTACCATCAAGCACAAACGACTCGAAGCTGGGATTTTCTCGGCCTTAACTACAACGAACAATCAGGTCTTCTAAAGAAAGCAAAGAACGGTGAAGATGTCATTGTCGGTGTCATCGATTCAGGTATATAAAACTACAGTACAATACGCTATATATATATATATTCTAAACCAAAATCACTTGCATTAATATAAGTAGAATTCCAGTAGTTAAAGCTTTGACGAAACGTAACAGGTATATGGCCCGAATCACGAAGCTTCGATGACAATGGCTACAGTCCCGTGCCAGCACGATGGAAGGGCAAGTGCCAGACCGGCGCGGCGTTCAACGCCACCACGGGTTGCAACAGGAAGATCATCGGCGTACGATGGTACTCGGGCGGCATTCCCGACGAGAACCTGAAGGGCGAGTACATGTCGGCGAGGGACCTCGGCGGCCACGGCACGCACGTCGCCTCGACGATCGTCGGCGGGCAGGTACGGAACGTGAGCCACAGACAGGGCGGCGCCCTGGCTGCCGGCACGGCGCGCGGTGGGGCGCCGCGCGCGCGGGTCGCGGTCTACAAGGTGTGCTGGGGCCTGCGCGCCCAGTGTGGCGGAGCCGCGATCCTCGCCGCCATCGACGACGCCATGAACGACGGCGTGGATGTGCTGTCCCTGTCGATAGGAGGCGCGGGCGAGCATTACGAGACGCTCCACGCCGTGGCGAGAGGGATCCCCGTCGTGTTCGGTGGCGGGAACGACGGCCCCACGCCGCAGATCGTGAGGAACACCGTGCCGTGGGTCATCACGGTGGCCGCCTCCACGATCGACAGGGCCTTCCCCACGGTGATATCGCTCGGGAACAACAAGAAATTTGTGGTAATTAAGTAACCATGCTATTTCGTCAATAACTTGCAAGTTATATGGACTATGAATTGCATGACGATTGCTATATGGACTATGAATGTTTTACTGCACAGCTACACTGATGTACTCCTATAGCTTTATGTGGGTTATTTAACCTTTGTATATATTTGCTTGCAGGGGCAATCTCTTTACTACAATGCAACAGCAAGCAGCACCAAATTTCAAATGCTTGTTGATGGATCAAGGTAACAAAACCAATAGTGATCATGTTCAAGTTTGTTAAAATCATGATCCTGAATCGGAATCGAATACATAAAAATCGTAAATTCTACCTGTATAAAATCATAGAATCATACCTCTTAATTAGGATGGTAAAGTGCGCAAAATGGTATGGCAGAATCGAGATTTAATTTAACAACCTTGATCATGCTAAGCTAGTATCATTAGTCATCACATTTGATAGATCGATCACTCTGCTTTCTTTAGATCCTGATTATGAATGGATTGCCGTGTGCAGCTGCGACACGCAGACGTTGGCGTCGATCAACATCACCAGCAAGGTCGTGCTGTGCTCGCCGCCGTCGCTGATGCCACCTCGGCTGTCGCTGGGCGACATCATCGGCCGTGTCATCAAGGCAGGCGCCAATGGCCTCATCTTCGTGCAGTACTCCGTCAGCAACGCCCTTGATTTTCTGAATGCCTGCAGCCGCGCCAGCGTGCCATGTGTACTGGTGGACTACGAGATCACACGCAGGATCGAGTCATACATGACCAGCACAAGGTGAGCTCGAACTCTTGATACCATCCCATTAACATCTACTCTCCAATACGCAAAACCAGCTTGAGTACTGTACATGAATGATCTTTTGATGTTTCTTCTCTCATTTTTCAGCACGCCCATGGTGAAGGTGTCGTCGGCCATGACGGTGGTCGGGAGTGGGGTGCTCTCACCAAGGATCGCTGCATTCTCGTCAAGAGGACCGAGCTCCTTGTTTCCCGGAATACTGAAGGTGACATGTTGATCTTTGATGTTCTACAAACAATGAAAATACCTTATATTACTGTGTAGTTGTGACGATGGCGTCAGGTTTTTTGAACGTCTCAAAACTAACCTGTTTGTCGGTTCAACAGCCTGATATTGCTGCGCCGGGAGTCAGTATCCTCGCAGCTGTGGGTGATTCGTACGAGCTCAAGTCTGGGACGTCCATGGCGTGCCCGCATGTATCAGCAGTGGTGGCGTTGCTCAAGATGGTTCACCCGGACTGGTCGCCTGCCATGATCAAGTCCGCCATCGTCACTACTGGTACTTAGATTAATCTGTTTCCAATAATTCGTTGCTTTTAGCTTAGTTAGGACTAACCAGTATACATCTCTCTTGATTGCAGCTTCGGTGACAGATCGTTTTGGCATGCCAATCCAAGCTGAGGCAGTGCCAAGGAAAGTGGCTGACCCATTCGACTTCGGTGGTGGCCACATCGAACCGAATAAAGCCATTGACCCTGGCCTAGTATATGACATTGATCCAAGCCACTACACTAAGTTCTTCAACTGCACCCTTCCTGAAGCTGAGGATGACTGCGAGTCCTACATGGAGCAAATCTATCAGCTCAACCTCCCGTCAATTGCAGTGCCAAACCTAAAGGACTCTGTCACGGTTTGGCGGACTGTCACCAATGTTGGAGAAGCAGAAGCAACTTACCATGCAGCGCTTGAGGCACCGGTTGGTATGACTATGTCAGTGGAACCTTCGGTGATCACATTCACTAGGGGTGGTAGTAGAAGTGTAACATTTAAGGTGACATTCACAACAACACAGAGAGTACAAGGTGGCTACACGTTTGGGAGTTTGACATGGCTAGATGGTAACACACACTCTGTGAGAATTCCGATTGCAGTTCGCACCATAATCCAGGACTTTGTTGCTGATACTTCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006722

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