BGIOSGA006724

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Revision as of 02:44, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006724| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006724, complete gene.| tag = OS02G02...")
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Gene Name

BGIOSGA006724

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006724, complete gene.

LocusTag

OS02G0270200

Ensembl Transcript ID

BGIOSGA006724-TA

Ensembl Protein ID

BGIOSGA006724-PA

Length

3761

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:10518536..10522296

Sequence Coding Region

10522283..10522296,10521640..10521778,10521446..10521537,10521263..10521360,10521019..10521174
,10520299..10520921,10520121..10520188,10519708..10519983,10519476..10519593
,10519139..10519358,10518536..10519089

Genome Context

<gbrowseImage1> name=IndicaChromosome02:10518536..10522296 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:10518536..10522296 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGACTTAAGCATAAGATCACAACACCAAACCATAAGAACATACTCCTCGAAATCAAACATGGACTCGAGATCACCTTTTCTTCCTACTCTGCACTTGATTCTTGTACTGGTAGTGGTACTCCCCATTTTCGCCGATGCGTCCAGCAGACTCTACATTGTTTACATGGGGGAGAAGAAGCATGACGATCCATCTGTGGTCACCGCATCGCACCATGATGCTCTTACTTCGGTTTTTGGGAGTAAGGATGAAGCCATGAAATCTATAGTCTACAGCTACAAGCACGGATTCTCTGGATTCGCTGCAATGCTCACCGAATCCCAAGCTGAAGAACTTGCAAAATTACCTGGAGTTGTCAGTGTAAAACCTAACACTTATCATAAAGCACACACGACCCGGAGCTGGGATTTTCTTGGACTTAATTACTATGAACAATCAAATCTCCTGAAGAAGGCAAACTATGGTGAAGATGTCATTGTTGGCGTCATCGATTCAGGGATATGGCCTACATCACGAAGCTTTGATGATAACGGCTATGGCCCTGTGCCAGCACGATGGAAGGGGAAGTGCCAGACTGGCGCGGAGTTCAACACCACGAGTTGCAACCGGAAGATCATCGGTGCGCGCTGGTACTCCGGCGACATCCCGGACGACTTTCTCAAAGGTGAGTACATGTCACCAAGGGATCTTAGCGGACACGGCACGCACACTGCCTCGACGATCGTCGGCGGGCAGGTGTGGAACGTGAGCCACCGGCAGAGCGGCCTGGCCGCGGGCATGGCCCGCGGAGGTGCGCCGCGGGCGAGGCTGGCGGTCTACAAGGCTTGCTGGGGTGACAGCAACTCCACGTGTGGCGACGCGTCCGTCCTCGCGGCCATCGACGACGCCATAAACGACGGCGTGGACGTGCTGTCGCTGTCGCTGGGAGGGTACGGTGAGGTCGCCGGGACGCTGCACGCCGTGGCGAGGGGGATCACCGTGGTGTTCGCCGGCGGGAACGAGGGCCCCGTGCCACAGTCCGTGTCGAACGCCGTGCCGTGGGTCATCACGGTGGCCGCTAGCACCATCGATCGCTCGTTTCCAACCGTGATATCGCTCGGGAACAAAGAGAAGCTTGTGGGACAATCTCTTAACTACAATTCAACGATGAACAGCAGCAACTTTCATATGCTCGTCGATGGGAAAAGATGCGACGAGTTGTCACTGGCATCGGTCAACATCACCGGCAAGATCGTCCTGTGCTCGGCGCCGTTGGAGGCAGCGAACTCGTCACCAAACAACGCGTTCATCGCCACACTAGCCGCCGTCGTGAAGAGACGCGCGAAGGGTCTCATCTACGCGCAGTACAGCGCCAACGTCTTGGATGGCTTGGAAGACTTCTGCCACCTGTATCTGCCGGCCAGCTGCGTGCTGGTCGACTACGAAATCGCAAGCAGAATCGCCTCCTACGCGAAAAGCACAAGGAAATCTGTCGTGAAGATATCTCGGGTGGTGAGCGTGGTTGGGAATGGGGTACTCGCACCGAGGATCGCCATGTTCTCGTCGAGAGGCCCGAGCAATGAGTTTCCTGCCATCCTCAAGCCTGACATATCTGCACCTGGAGTCAGCATCCTGGCTGCTGTGGGCGACTCATACAAATTCATGTCTGGGACGTCCATGGCATGCCCGCACGTCTCGGCGGTGGCGGCGCTGCTCAAGTCAGTTCACCCGGACTGGTCGCCGGCCATGATCAAGTCTGCCATTGTCACCACAGGCATGTACTCATGCCACACTACAAGTTCAGTGTATATGCCTTATATGGCATCGGTGACCGATCGTTTTGGCATGCCAATCCAAGCTGAGGGAGCACCTAGGAAGATCGCCGACCCCTTCGACTTTGGTGGTGGCCAGATCGACCCAGACAAGTCCATTGACCCTGGGCTTGTCTATGACATTGACCCGAAAGAATACACTAAGTTTTTCAACTGCACCCTCACTCTTGGCCCTAAGGATGACTGTGAGTCCTATGTGGGTCAGCTCTATCAGCTCAACCTTCCGTCCATCGTCGTACCAGACCTTAAGGACTCTGTTACGGTTTGGCGCACTGTAACCAACGTCGGAGGGGAAGAAGGAACTTATAAGGCATCGATTGAGGCTCCAGCTGGTGTGAGGATATCTGTTGAACCTTCAATTATCACATTCACCAAAGGTGGTAGTAGAAATGCAACATTCAAGGTGACATTCACAGCAAGGCAGAGAGTACAGTCTGGCTACACGTTTGGAAGCTTGACATGGCTAGATGGTGTCACACACTCGGTGAGGATTCCAATAGTGGTTCGCACCATAATCCAAGACTTTGTTTCAGATACTTCGTAA</cdnaseq>

Protein Sequence

<aaseq>MDDLSIRSQHQTIRTYSSKSNMDSRSPFLPTLHLILVLVVVLPIFADASSRLYIVYMGEKKHDDPSVVTASHHDALTSVFGSKDEAMKSIVYSYKHGFSGFAAMLTESQAEELAKLPGVVSVKPNTYHKAHTTRSWDFLGLNYYEQSNLLKKANYGEDVIVGVIDSGIWPTSRSFDDNGYGPVPARWKGKCQTGAEFNTTSCNRKIIGARWYSGDIPDDFLKGEYMSPRDLSGHGTHTASTIVGGQVWNVSHRQSGLAAGMARGGAPRARLAVYKACWGDSNSTCGDASVLAAIDDAINDGVDVLSLSLGGYGEVAGTLHAVARGITVVFAGGNEGPVPQSVSNAVPWVITVAASTIDRSFPTVISLGNKEKLVGQSLNYNSTMNSSNFHMLVDGKRCDELSLASVNITGKIVLCSAPLEAANSSPNNAFIATLAAVVKRRAKGLIYAQYSANVLDGLEDFCHLYLPASCVLVDYEIASRIASYAKSTRKSVVKISRVVSVVGNGVLAPRIAMFSSRGPSNEFPAILKPDISAPGVSILAAVGDSYKFMSGTSMACPHVSAVAALLKSVHPDWSPAMIKSAIVTTGMYSCHTTSSVYMPYMASVTDRFGMPIQAEGAPRKIADPFDFGGGQIDPDKSIDPGLVYDIDPKEYTKFFNCTLTLGPKDDCESYVGQLYQLNLPSIVVPDLKDSVTVWRTVTNVGGEEGTYKASIEAPAGVRISVEPSIITFTKGGSRNATFKVTFTARQRVQSGYTFGSLTWLDGVTHSVRIPIVVRTIIQDFVSDTS</aaseq>

Gene Sequence

<dnaseqindica>1..14#519..657#760..851#937..1034#1123..1278#1376..1998#2109..2176#2314..2589#2704..2821#2939..3158#3208..3761#ATGGATGACTTAAGGTCTGTTTAGTACAATTCCAATTCCAGCTCCACCTCTCCTAGAACTGGAGCTCAGCCAAACAGTTTTAGTTCCACCTAAAATAGGAGTGGAGCTGTGTGAAGCTCTCTCACAAAATAAACTAGAGAAGTTCAGCTGGGTTTATGCAACTCCACAACTCCAGTCCAAACCCAACTCCTGAAGTTAAATTTAGGAGTTAGAGCTCTACCCAACTCTACTAATTAATAAATTCATTTCATCACCACACAATGTTGATCTGGTCTTTGCATGTGAAACAGTATTATCATATCACTGTTCTTTGAGGATGACGAACAAATCAAACCACAATGCTTACCATACAAGTGTGGATTTGATTTATTAATTAGTCTCTTTCTGTCGTTACTTGTGACCTGAAAGAACAAATCAACACGCAAACACGAGGATTTTCTTTTTTTAACGCAGTTCCTGCATATCCCCCGCGTGATTAATGTTGGATGCTATCTGCTATTTATACCTGCATGCCACAGCATAAGATCACAACACCAAACCATAAGAACATACTCCTCGAAATCAAACATGGACTCGAGATCACCTTTTCTTCCTACTCTGCACTTGATTCTTGTACTGGTAGTGGTACTCCCCATTTTCGCCGATGCGTCCAGCAGAGTAAGCCGGTTTCCTCTCCCATATGAAACATGATTTCCTATTTTGTTTCATAAGAGTACTACTGACATTATTCTTGGGAACATTTTTTCATTGAATTTTCAGCTCTACATTGTTTACATGGGGGAGAAGAAGCATGACGATCCATCTGTGGTCACCGCATCGCACCATGATGCTCTTACTTCGGTTTTTGGGAGGTATTAGTAGTTCAAGTTGTAAATTCTGCATCTTGACATGAAAAGGAACTTGGGTTAATTTTGTCAATTGTTTTCGATGGAACAGTAAGGATGAAGCCATGAAATCTATAGTCTACAGCTACAAGCACGGATTCTCTGGATTCGCTGCAATGCTCACCGAATCCCAAGCTGAAGAACTTGCAAGTAATCATCGATCCTTTATAATGGCATGAGCATGTCGTATTACCTCTTGCATGATCATTATTAAGGAACTAATGAGTTTCCGGTGCAGAATTACCTGGAGTTGTCAGTGTAAAACCTAACACTTATCATAAAGCACACACGACCCGGAGCTGGGATTTTCTTGGACTTAATTACTATGAACAATCAAATCTCCTGAAGAAGGCAAACTATGGTGAAGATGTCATTGTTGGCGTCATCGATTCAGGTTGAAAAATGCATTACATGCTAGTACTACTCTCGCTGAATTAGCATGCTATATATTAAAAAATTTAGTAATTTAGCCGGGATGAACCGTGTTACAGGGATATGGCCTACATCACGAAGCTTTGATGATAACGGCTATGGCCCTGTGCCAGCACGATGGAAGGGGAAGTGCCAGACTGGCGCGGAGTTCAACACCACGAGTTGCAACCGGAAGATCATCGGTGCGCGCTGGTACTCCGGCGACATCCCGGACGACTTTCTCAAAGGTGAGTACATGTCACCAAGGGATCTTAGCGGACACGGCACGCACACTGCCTCGACGATCGTCGGCGGGCAGGTGTGGAACGTGAGCCACCGGCAGAGCGGCCTGGCCGCGGGCATGGCCCGCGGAGGTGCGCCGCGGGCGAGGCTGGCGGTCTACAAGGCTTGCTGGGGTGACAGCAACTCCACGTGTGGCGACGCGTCCGTCCTCGCGGCCATCGACGACGCCATAAACGACGGCGTGGACGTGCTGTCGCTGTCGCTGGGAGGGTACGGTGAGGTCGCCGGGACGCTGCACGCCGTGGCGAGGGGGATCACCGTGGTGTTCGCCGGCGGGAACGAGGGCCCCGTGCCACAGTCCGTGTCGAACGCCGTGCCGTGGGTCATCACGGTGGCCGCTAGCACCATCGATCGCTCGTTTCCAACCGTGATATCGCTCGGGAACAAAGAGAAGCTTGTGGTACGCACCACCGACCTTTTCTTTTTCTGTTTGCTTTTATTTCTTTCAAAAAACACCGGCGTTGTTACAGGTTAAAAGTGATTTCTTTTTAATATGATCTTTAAATTCAGGGACAATCTCTTAACTACAATTCAACGATGAACAGCAGCAACTTTCATATGCTCGTCGATGGGAAAAGGTAACGGAACGAAATGATCATTGCCAAAACAACGCATCAGTCAACACATTATATCTACGAATATTTCTGCACCTATTAAAATATAAATAAATCCTGAATGAGTGACGCAGACCAATGCCAATATGCCATTGACACAGATGCGACGAGTTGTCACTGGCATCGGTCAACATCACCGGCAAGATCGTCCTGTGCTCGGCGCCGTTGGAGGCAGCGAACTCGTCACCAAACAACGCGTTCATCGCCACACTAGCCGCCGTCGTGAAGAGACGCGCGAAGGGTCTCATCTACGCGCAGTACAGCGCCAACGTCTTGGATGGCTTGGAAGACTTCTGCCACCTGTATCTGCCGGCCAGCTGCGTGCTGGTCGACTACGAAATCGCAAGCAGAATCGCCTCCTACGCGAAAAGCACAAGGTGAGAGTTCGAGCTCTTTGGTGACCAGCTACATTGGAACAAAGTAATATAATCAGAACCTGGTTGTGCTCGTCTGAAAACGCCCAAATGTTCTTCATATACTATTTCTTTCAGGAAATCTGTCGTGAAGATATCTCGGGTGGTGAGCGTGGTTGGGAATGGGGTACTCGCACCGAGGATCGCCATGTTCTCGTCGAGAGGCCCGAGCAATGAGTTTCCTGCCATCCTCAAGGTGACAACAACGACCTTGATCTTGACATGAATATCCCAACCATGAGATAATTAACGGCGTTCCTCTTGATTCCTATGTGTGAAATTACCTTCTGATATCCGATTCTGTGTTCAACAGCCTGACATATCTGCACCTGGAGTCAGCATCCTGGCTGCTGTGGGCGACTCATACAAATTCATGTCTGGGACGTCCATGGCATGCCCGCACGTCTCGGCGGTGGCGGCGCTGCTCAAGTCAGTTCACCCGGACTGGTCGCCGGCCATGATCAAGTCTGCCATTGTCACCACAGGCATGTACTCATGCCACACTACAAGTTCAGTGTATATGCCTTATATGGGTAATTTAGGACTAACAAACTATTAGTATATATCTCTCTACTATTGCAGCATCGGTGACCGATCGTTTTGGCATGCCAATCCAAGCTGAGGGAGCACCTAGGAAGATCGCCGACCCCTTCGACTTTGGTGGTGGCCAGATCGACCCAGACAAGTCCATTGACCCTGGGCTTGTCTATGACATTGACCCGAAAGAATACACTAAGTTTTTCAACTGCACCCTCACTCTTGGCCCTAAGGATGACTGTGAGTCCTATGTGGGTCAGCTCTATCAGCTCAACCTTCCGTCCATCGTCGTACCAGACCTTAAGGACTCTGTTACGGTTTGGCGCACTGTAACCAACGTCGGAGGGGAAGAAGGAACTTATAAGGCATCGATTGAGGCTCCAGCTGGTGTGAGGATATCTGTTGAACCTTCAATTATCACATTCACCAAAGGTGGTAGTAGAAATGCAACATTCAAGGTGACATTCACAGCAAGGCAGAGAGTACAGTCTGGCTACACGTTTGGAAGCTTGACATGGCTAGATGGTGTCACACACTCGGTGAGGATTCCAATAGTGGTTCGCACCATAATCCAAGACTTTGTTTCAGATACTTCGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006724