BGIOSGA006725

From RiceWiki
Revision as of 02:44, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006725| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006725, complete gene.| tag = P0693E0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006725

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006725, complete gene.

LocusTag

P0693E08.30

Ensembl Transcript ID

BGIOSGA006725-TA

Ensembl Protein ID

BGIOSGA006725-PA

Length

6119

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:10473189..10479307

Sequence Coding Region

10479221..10479307,10478773..10478864,10478580..10478677,10477140..10477295,10476373..10476992
,10474753..10474826,10474444..10474665,10474119..10474257,10473830..10474001
,10473189..10473736

Genome Context

<gbrowseImage1> name=IndicaChromosome02:10473189..10479307 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:10473189..10479307 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGTTTAGATCAGCTTTCTGTCGTTCTGCGCTGCTACTTGTCCTCTTGGTTTTGCTCCCCCTTTCAGCTAGCGCATCAACCAAACTCTACATCGTGTACATGGGGGAGAAGAAACACGACGATCCATCCATGGTTACCGCATCGCACCATGATGCCCTTACTTTTGTTATTGGGAGTAAGGATGGAGCCATGAAGTCTATTGTGTACAGTTACAAGCATGGTTTTTCTGGATTCGCCGCGATGCTCACCGAATCCCAAGCCGAGGAACTTGCAAAATACCCTGGAGTTATCAATGTGAAACCTAACACTTATGGGAAAGCGCACACGACTCGAAGCTGGGACTTTCTTGGTCTCAACTATTATGAAAAATCGGGTGTTCTTAAAGATGCTATGTATGGGGAAGATGTTATCATCGGCGTCGTCGATACAGGGATATGGCCTGAATCACCTAGCTTCAATGACGATGGGTATGGCCCTGTGCCTGCACGGTGGAAAGGTGTCTGCCAGACCGGTGATGCATTCAACACCACGAATTGCAACCGAAAGATCATAGGGGCACGGTGGTACTCTGCCGGTGCTACCGACGATATGCTGAAGGGCGAGTACATGTCACCGAGAGACTTCCACGGCCATGGCACGCATACTGCCTCGACGATCGCCGGTGGCCGGGTGTGGAACGTGAGCCACCACCAAGGTGGCCTTGGCGCCGGCGTGGCGCGTGGCGGAGCGCCTCGCGCACGTGTAGCAGTATACAAGGTTTGCTGGGGTGTGGGCGGAAATTTCGGTGATGCTGCGGTCCTCGCGGCCGTCGACGACGCCATAAACGATGGTGTGGACGTGTTGTCACTGTCGTTAGGAGGGCCTAACGAGATCCACGGGACTCTGCATGCTGTGGCCCGGGGGATCACTGTGGTATTCGCCGGCGGGAACGACGGTCCCACATCACAGACGGTGCAGAACACTGTACCATGGGTCATCACCGTGGCCGCTGCCACCATCGATCGGACCTTTCCTACCACCATATCGCTCGGGAACAATGAGAAATTGCTGGGACAATCTCTTTACTACAATGCAACAGTGAGCAGCATCAAATTTCAAACGCTTGTAGTTGTTAATGGATCTAGCGCGATCAACGTCACAGCAGGCAATGTCGTGCTGTGGCCGGAGCCGTACAATAAGGACACCATTGACCTCTTGGCCAAGGAAGGCGCCAAGGGCATCATCTTCGCGCAGGGCAATACCTTCAATCTTCTTGAAACCCTGGACGCCTGCAATGGCATAATGCCCTGTGCGGTTGTTGACAAAGAGATTGCAAATAGAATTGCCTCCTATGCGACCAGCACAAGACATTTCTTCTCACTTTCCAGCATGCCCGTCGTGAAGGTGTCTCCGGCTGTCACCGTGGTCGGCAATGGGGTGCTATCGCCGAGGGTCGCAGGGTTCTCGTCAAGAGGACCGGGCACTAAGTTTCCCGGCATACTGAAGCCTGACATAGCTGCACCCGGGGCCAGCATACTGGCAGCTGTGGGCGACTCTTACAAGTTCATGTCCGGGACATCCATGGCATGCCCTCATGTCTCGGCAGTGGTGGCACTGCTCAAGTCGGTTCACCCAGACTGGTCACCTGCCATGATCAAGTCTGCCATTGTCACTACAGCATCAGTGACGGACCGTTTTGGTATGCCAATTCAAGCTGAGGGATCAGCAAGAAAAGTGGCCGACCCTTTCGACTTCGGCGGCGGCCACATAGAGCCAAACAAGGCAATCGACCCTGGCCTAGTGTATGACATCGACCCAAAAGACTATACAAAGTTCTTTAACTGCTCCCTCGACCCCCAGGAAGACTGCAAGTCCTACATGGGGAAGCTCTACCAACTCAACCTCCCATCCATCGCTGTGCCAGACCTCAAGGACTCAGTTATAGTCTGGCGCACTGTCACCAACGTTGGAGGGTCAGAAGCAAATTACAAGGTGGTGGTTGAAGCACCAGCTGGGGTGAATGTTGTTGTGGAGCCTCAGGTGATCACTTTCGCTAAAGGTGGTAGTCAAAGTGCAACATTTAAAGTCACATTTACAGCAAGGCAGAGAGTACAAGGTGGATATACATTTGGGAGCTTGACATGGCTAGACGATAATACACACTCGGTGAGGATTCCGGTAGCAGTACGCACTATAATCCAAGACTTTGTTTCAGATACCGCATAA</cdnaseq>

Protein Sequence

<aaseq>MEFRSAFCRSALLLVLLVLLPLSASASTKLYIVYMGEKKHDDPSMVTASHHDALTFVIGSKDGAMKSIVYSYKHGFSGFAAMLTESQAEELAKYPGVINVKPNTYGKAHTTRSWDFLGLNYYEKSGVLKDAMYGEDVIIGVVDTGIWPESPSFNDDGYGPVPARWKGVCQTGDAFNTTNCNRKIIGARWYSAGATDDMLKGEYMSPRDFHGHGTHTASTIAGGRVWNVSHHQGGLGAGVARGGAPRARVAVYKVCWGVGGNFGDAAVLAAVDDAINDGVDVLSLSLGGPNEIHGTLHAVARGITVVFAGGNDGPTSQTVQNTVPWVITVAAATIDRTFPTTISLGNNEKLLGQSLYYNATVSSIKFQTLVVVNGSSAINVTAGNVVLWPEPYNKDTIDLLAKEGAKGIIFAQGNTFNLLETLDACNGIMPCAVVDKEIANRIASYATSTRHFFSLSSMPVVKVSPAVTVVGNGVLSPRVAGFSSRGPGTKFPGILKPDIAAPGASILAAVGDSYKFMSGTSMACPHVSAVVALLKSVHPDWSPAMIKSAIVTTASVTDRFGMPIQAEGSARKVADPFDFGGGHIEPNKAIDPGLVYDIDPKDYTKFFNCSLDPQEDCKSYMGKLYQLNLPSIAVPDLKDSVIVWRTVTNVGGSEANYKVVVEAPAGVNVVVEPQVITFAKGGSQSATFKVTFTARQRVQGGYTFGSLTWLDDNTHSVRIPVAVRTIIQDFVSDTA</aaseq>

Gene Sequence

<dnaseqindica>1..87#444..535#631..728#2013..2168#2316..2935#4482..4555#4643..4864#5051..5189#5307..5478#5572..6119#ATGGAGTTTAGATCAGCTTTCTGTCGTTCTGCGCTGCTACTTGTCCTCTTGGTTTTGCTCCCCCTTTCAGCTAGCGCATCAACCAAAGTAAGATGCATGCTTGGGGCAATTTTATAGTAGTGCTGGCTACTACCTCTAATTTCTTATGCATGTCATATATATACCAACAAATTAAGAGATACTAACATGCATAATAGATGTATAATACACTGTCACATTTTGTTTGGAGTTTGTATAGAGGTTGTCCGTTGCAGTGGTGTCTATTTCTCTCTTCTCTCTTCTCTCACATCACTATTTAGTATTATGTGGTATCTTGGATTTATGTTTAGACGCCCATAGTATTGCTCTTAGTTTCCTCTCTCGAGTCGTAAATTTGCTTTATGTTTGTGAAATATAATTATGCTATTATTATCATATTGGAATCATTGCTGTCGAAATTTCAGCTCTACATCGTGTACATGGGGGAGAAGAAACACGACGATCCATCCATGGTTACCGCATCGCACCATGATGCCCTTACTTTTGTTATTGGGAGGTATGTGATTGTTAATGATTCAAAATGGAACACCATTATTGGCTAGAGAAAAAAAATGGTAGCTCAGGGTTTCTGGTTTTCCCTCAATGAAACAGTAAGGATGGAGCCATGAAGTCTATTGTGTACAGTTACAAGCATGGTTTTTCTGGATTCGCCGCGATGCTCACCGAATCCCAAGCCGAGGAACTTGCAAGTAAGCATCACACCCGTAATGGCATTGGCACGTTAGTACTTAGGGCACCCGCAATGATAATCTATAGGCTCTCTACAAGAGATCCAAGTCAGCATATTTTCCTACTTGAAAGAGATTAAATGAAGAGAGAGAGCAAAGCTATCTACTAACCTGGAGATAGTCTATAGAGAAAAACGAGACAATGCATTAGAGAGCTATAGATACCCATGTAGACATACTATTGAGGTGGTTTACTATTAATCTAGTCTATTGCTGAGATGTAGATGTTTTATAGAGAGCACCTTACTTTACCATTGCGGGTGCTCTTAGTAGTTTGGAGAAATGGTCAAATACTAATTAAAGTTTACATATAAAAAAAAGGACGTAATCTATTTGTCAATTGGCTGAAAGTTTCTTACCTACACTCTAGCAGCACTTTTTTACACACTAGAACAATACTCATGATTCATATGTTTTTGTCTTGTACGCTGTTGTGAAAAGAAAGATTAGTCTAACCTACACTTTAAAGAATACTCTGCCATTCATTTATACTAAAGTTGTAGTTAGTAGTTTTATATATTATATGCATGTCCATGCTATAATTGCAGGCATAAGCTAACAGATAAGAAAAAACGGCAATAAACTGATTAAAAAATATGATAAGAAAAGGCTATAACACTCAGTTAAACCTTAGAGCAGGTACAATAGCAGACTATAAGCCAGCTATAAACATATTTTAAAGAGATAAAGGAAGAGAGAGAAGAACAGCGGGTTACAGATATGTAGCCAGCTGCAGCACGGACTCCAAGACATAATGTGTGTATGACATGTAGGACCATGTATTAATAGTATAGTAAGCAGTTATTGTATGAATTGTCTATTACATTGGCTATAGATGAATTGGAGCTAGTTAGCTATACTATTAAACTTGCTCTTAAGGGTAGAAAAAAAAAGTTAACATGCTTAGGCCATTCCCAACCCAAAACACTAGATATAGTTTCTGTAAACTCCACGTCATCAAGAAACTAGTGCTAGACACTACTCTTCCAATGCAAACACCACTATTCCATACTTAAATTTAATGCTACTTATCTCATATGATGTCTTATATGTTGTGTAGAAACCATGTCTCATGGAAGACATGGTTTTCTTCTATTTTCTTATTTATTCACTTGCCACATTATTTTTTATCTTAGGTGGCAGCTTATTTAATACTATGGACATCATACTAGTCATTTGGTTGGAAATGGCTTTATAGTACTAGCTAGCTGCGTGATCATTTAACTGATGAGTTTTCCGATACAGAATACCCTGGAGTTATCAATGTGAAACCTAACACTTATGGGAAAGCGCACACGACTCGAAGCTGGGACTTTCTTGGTCTCAACTATTATGAAAAATCGGGTGTTCTTAAAGATGCTATGTATGGGGAAGATGTTATCATCGGCGTCGTCGATACAGGTGTGATTGCATTGACTCACAATCTAGCTCAAAATTAATTTAAAACACATTTTTTTAAAAAAAAAATTCCAGCATATACTGGCTAGTTCTCAATCTTAATATATAATTCGGCTGCCCGAATATTTCAATGATATATCTATGTTACAGGGATATGGCCTGAATCACCTAGCTTCAATGACGATGGGTATGGCCCTGTGCCTGCACGGTGGAAAGGTGTCTGCCAGACCGGTGATGCATTCAACACCACGAATTGCAACCGAAAGATCATAGGGGCACGGTGGTACTCTGCCGGTGCTACCGACGATATGCTGAAGGGCGAGTACATGTCACCGAGAGACTTCCACGGCCATGGCACGCATACTGCCTCGACGATCGCCGGTGGCCGGGTGTGGAACGTGAGCCACCACCAAGGTGGCCTTGGCGCCGGCGTGGCGCGTGGCGGAGCGCCTCGCGCACGTGTAGCAGTATACAAGGTTTGCTGGGGTGTGGGCGGAAATTTCGGTGATGCTGCGGTCCTCGCGGCCGTCGACGACGCCATAAACGATGGTGTGGACGTGTTGTCACTGTCGTTAGGAGGGCCTAACGAGATCCACGGGACTCTGCATGCTGTGGCCCGGGGGATCACTGTGGTATTCGCCGGCGGGAACGACGGTCCCACATCACAGACGGTGCAGAACACTGTACCATGGGTCATCACCGTGGCCGCTGCCACCATCGATCGGACCTTTCCTACCACCATATCGCTCGGGAACAATGAGAAATTGCTGGTAAATAATCTATATCTATCTTAACCTCACTAAGGCTGTGTTTAGATGTAAAGTTTGGATCCAAATTTCAGTCCTTTTCCATCACATCAACCTGTCATACACACACAACTTTTCAGTCACATCATCTCCCATTTCAACCAAAATCCAAACTTTACGCTGAACTAAACACAGCCTAACTAGAAAATCTATTTTATTTTATGGGTGTATTATCATGACCGTTGATATGAATTTTACATAATGGGCCACATTAAAAACCCCGTTATTCTGCATGTTGTTGGAATTGAGAGTCCGAACTGAATACAACTTAGTTTTTACTGATTCTAAATTTTAATTTCAAACTTATCAAAAAATGGAAAAGTTATAGCTAATACACCAGATCGAGTATAACTTGATATTTATTAATTACGAATTTTAGAATTATTAATTCATGGAAAATCTCTTTTAATATTTTAAATATGAATAACAAATCATGAAATGCACGGGTTGACAACTGGAGTAGTCATGATAACTTGATATGTTTTTTTTGTTGCTCTAACTTTTATTTTTCACTTCTTATCTTGTTCTTTTTGTTCTTTTTTCTTTAAAACGTGAATATTAGGGAAGAACCTAATATCAAATACTTAGAAGGGTGAGGTTTTGAACCCAAGTCGTCTAGCTCACCACCTTGTGAGGTCGTTTCTCCTGTTCTTTTTCTTTGGCTGGTACATCCATATAATAGGGATGGATGGTGGATGATTTTATTACTCCTTCAATCCCAAAGTATAAGTCTTAACCACTTCTAACACAAAGATAAAAAAAGAATTTAATTAATCGACTCCTCGATGGAATCATATCCATACATGCAAGCAATGTGATTGGTAGACTTATGGCAGTACGTGGAATTAAAATAAACCAAATTTAAAAAATCAAGATATGATAGTTAATATATGTATGCATACATGACTTATATTATGAGACAAGTAAAAAAGTGGTTGTGTCTTATATTTTAGGATGGAGGAAGTAATTGTTGATTACTCTATTTGCTGTTGACACAAATAGTTACACTGCTAGCTCGATGTGGATTCTTCATTCGTAGAGTACTATCTTTATGGTGGGCTACTAGCTAGTACTCTATCCGTCTCAAAATATAAGTATTTTTATACTCTGACACGGTATTCGAGATGCTACTTTGAGCAACAATATCTATAAAAGTAAGATGTATTCAATAAAAAGAGTTACATATTATGATAGTTTGTTTAATAATAAATCTAGTAACATCAATTTTGTATGATTGATCTTTTTTATTTTTTTTTTGCTATTAATAGTTAAAGTTGAAAATATTTGACTTATCACTATACTAAAAATGCTTATATTTTGGGACGGAGGAGTAGTAGTTTTTGCCTTTTTATGAACTAATCTCAAGCATTGATTCATTTGTTCATTAATTTTACTACCAGTTGCTAAGGGAAAAGTACGAATAATTATGAACCATTGAGTTGGAAAAAATGAACGATCTACGTAATATTGTAAAAACACTTACTAATCGTAATATACATCGTACATGCAGGGACAATCTCTTTACTACAATGCAACAGTGAGCAGCATCAAATTTCAAACGCTTGTAGTTGTTAATGGATCTAGGTAACCAAACCAGTGATCATTTCAACCCAAGTACTCCTAGTTACTTGTTTAGTCTTAATTAATTCAATTGTTACTGGATTACTGCAGCGCGATCAACGTCACAGCAGGCAATGTCGTGCTGTGGCCGGAGCCGTACAATAAGGACACCATTGACCTCTTGGCCAAGGAAGGCGCCAAGGGCATCATCTTCGCGCAGGGCAATACCTTCAATCTTCTTGAAACCCTGGACGCCTGCAATGGCATAATGCCCTGTGCGGTTGTTGACAAAGAGATTGCAAATAGAATTGCCTCCTATGCGACCAGCACAAGGTGAGAGATCGATCGAACTAGTTGACAAGCCACAATAACACATTATGTGAGATTTTCTCATATAAACTCCAATTTGGAAAAAGAAAGCCACAAATTCAATTTCTTATGATCTCTAGAATAGCATACACGATGACCCAAACAAGGTTGAACTATGTATGTAACTTTTCTTTTTTTTTTAACTATTAGACATTTCTTCTCACTTTCCAGCATGCCCGTCGTGAAGGTGTCTCCGGCTGTCACCGTGGTCGGCAATGGGGTGCTATCGCCGAGGGTCGCAGGGTTCTCGTCAAGAGGACCGGGCACTAAGTTTCCCGGCATACTGAAGGTGACCTGCAATTCTTGACATTCATTGATCAAATGCTAGATTGTCACGCCCTCTTACCTTTAATACATATGATGGAACTGCTTCCTAAAAAGTTTTAGTGCTCTATATTTTTTATAGCCTGACATAGCTGCACCCGGGGCCAGCATACTGGCAGCTGTGGGCGACTCTTACAAGTTCATGTCCGGGACATCCATGGCATGCCCTCATGTCTCGGCAGTGGTGGCACTGCTCAAGTCGGTTCACCCAGACTGGTCACCTGCCATGATCAAGTCTGCCATTGTCACTACAGGTACGAATAAAAGATATATACTACCTCGAAATGTTTTGAGAACTTTATGACTTTCAACTTAATTAGGACTCATTATACTCCTGATGATTGCAGCATCAGTGACGGACCGTTTTGGTATGCCAATTCAAGCTGAGGGATCAGCAAGAAAAGTGGCCGACCCTTTCGACTTCGGCGGCGGCCACATAGAGCCAAACAAGGCAATCGACCCTGGCCTAGTGTATGACATCGACCCAAAAGACTATACAAAGTTCTTTAACTGCTCCCTCGACCCCCAGGAAGACTGCAAGTCCTACATGGGGAAGCTCTACCAACTCAACCTCCCATCCATCGCTGTGCCAGACCTCAAGGACTCAGTTATAGTCTGGCGCACTGTCACCAACGTTGGAGGGTCAGAAGCAAATTACAAGGTGGTGGTTGAAGCACCAGCTGGGGTGAATGTTGTTGTGGAGCCTCAGGTGATCACTTTCGCTAAAGGTGGTAGTCAAAGTGCAACATTTAAAGTCACATTTACAGCAAGGCAGAGAGTACAAGGTGGATATACATTTGGGAGCTTGACATGGCTAGACGATAATACACACTCGGTGAGGATTCCGGTAGCAGTACGCACTATAATCCAAGACTTTGTTTCAGATACCGCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006725

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA006725&oldid=60277"