BGIOSGA006731

From RiceWiki
Revision as of 02:44, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006731| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006731, complete gene.| tag = OsI_066...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006731

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006731, complete gene.

LocusTag

OsI_06680

Ensembl Transcript ID

BGIOSGA006731-TA

Ensembl Protein ID

BGIOSGA006731-PA

Length

5876

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:10387597..10393472

Sequence Coding Region

10393191..10393472,10388139..10388390,10387597..10388022

Genome Context

<gbrowseImage1> name=IndicaChromosome02:10387597..10393472 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:10387597..10393472 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACCATAGCTTTCTCTCGGTTATCTATCTACTTTTGTGTTCTTCTCCTATGCCATGGCTCTATGGCCCAGCTATTTGGTCCGAACGTAAATCCATGGCACAACCCTCGGCAAGGAGGTTTTAGGGAGTGTAGATTTGATAGACTACAAGCATTTGAACCACTTCGGAGAGTGAGGTCAGAAGCCGGGGTTACAGAGTACTTTGATGAGAAGAATGAACAATTCCAGTGCACAGGTACATTTGTCATCCGACGTGTCATTGAGCCTCAAGGCCTTCTGGAACAAGCACAACAGCAGGAACAAGCACAAGCTCAATACCAAGTTCAGTACAGTGAAGAACAACAACCATCTACGCGTTGCAACGGTTTAGATGAGAACTTCTGCACAATCAAGGCAAGGTTGAACATCGAAAATCCTAGCCATGCTGATACTTACAACCCACGTGCTGGAAGGATCACACGTCTCAACAGTCAGAAGTTCCCCATTCTTAACCTTGTACAATTGAGTGCTACTAGAGTAAATCTATACCAGAATGCTATTCTCTCTCCGTTTTGGAACGTTAATGCCCATAGCCTGGTGTATATCGTTCAAGGGCATGCTCGAGTTCAGGTCGTTAGTAACCTTGGAAAGACGGTATTCAATGGCGTTCTACGTCCAGGTCAATTGCTGATCATTCCGCAACACTACGTTGTCTTGAAGAAAGCAGAGCATGAAGGATGCCAATACATTTCATTCAAGACCAATGCAAACTCCATGGTGAGCCACCTTGCAGGGAAGAACTCAATATTCCGTGCCATGCCAGTGGATGTGATCGCTAATGCTTACCGCATATCGAGGGAGCAAGCACGAAGCCTTAAGAATAATAGGGGAGAAGAGCTCGGTGCCTTCACTCCTAGATATCAACAACAGACCTACCTAGGCTTCTCAAATGAGTCGGAGAACGAGGCCTCAGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MATIAFSRLSIYFCVLLLCHGSMAQLFGPNVNPWHNPRQGGFRECRFDRLQAFEPLRRVRSEAGVTEYFDEKNEQFQCTGTFVIRRVIEPQGLLEQAQQQEQAQAQYQVQYSEEQQPSTRCNGLDENFCTIKARLNIENPSHADTYNPRAGRITRLNSQKFPILNLVQLSATRVNLYQNAILSPFWNVNAHSLVYIVQGHARVQVVSNLGKTVFNGVLRPGQLLIIPQHYVVLKKAEHEGCQYISFKTNANSMVSHLAGKNSIFRAMPVDVIANAYRISREQARSLKNNRGEELGAFTPRYQQQTYLGFSNESENEASE</aaseq>

Gene Sequence

<dnaseqindica>1..282#5083..5334#5451..5876#ATGGCGACCATAGCTTTCTCTCGGTTATCTATCTACTTTTGTGTTCTTCTCCTATGCCATGGCTCTATGGCCCAGCTATTTGGTCCGAACGTAAATCCATGGCACAACCCTCGGCAAGGAGGTTTTAGGGAGTGTAGATTTGATAGACTACAAGCATTTGAACCACTTCGGAGAGTGAGGTCAGAAGCCGGGGTTACAGAGTACTTTGATGAGAAGAATGAACAATTCCAGTGCACAGGTACATTTGTCATCCGACGTGTCATTGAGCCTCAAGGCCTTCTGGTACCTCGATACAGCAATACTCCTGGCATGGTCTACATCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATGAGAAAGTACGCCTATTTTAAGAAATGACACCCGAATGACGCCAAATCATGTCGGATGCGATCATACCAGCACTAAAGCACCGGATCCCATCAGAACTCCGAAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTTGTGTTGCATCCCTCCTTTTTGTCTCTCTCTCCCCCCTTTTGACTCGCGCCGCTGCGTCCCTCGTGTTGTGTCGCCCCTTGGGCGAGAGCTGGGGAGAATCGGATGTAACATTTTCTGTAGATGTCCGTGGATATATCATTTGCCTGATTCCGAGTCCGTATGAGAAAGTTACGCCTATTTTAAGAAATGACACCCGAATGACGCCAAAGCATGACAGATGCGATCATACCAGCACTAAAGCATCAGATCCCATCAGAACTCCGAAGTTAAGCGTGCTTGGGCGAGAGTAGTACGAGGATGGATGACCTCCTGGGAAGACCTCCTGGGAAGTCCACGTGTTGCATCCCTCCTTTTTGTCTCTTTCTCCCCCCATCTGACTCGCGCCGCTGCGTCCCTCGTGTTGTCTCGCCCCTTAGGCGAGAGCTGGGGAGAATCGGATGTAACATTTTCTGTAGATGTCCGTATCATTTGCCTGATTCCGAGTCCGTATGAGAAAGTTACGCCTATTTTAAGAAATGACACCCGAATGACGCCAAAGCATGTCGGATGCGATCATACCGGCACTAAAGCACCGGATCCCATCAGAACTCCGAAGTTATGCGTGCTTGGGCGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCATCCCTCCTTTTTGTCTCTCTCTCCCCTCTTTTGACTCGCGCCGCTGCATCCCTCGTGTTGTGTCGCCCCTTGGGCGAGAGCTGGGGAGAATCGGATGTAACATTTTCTGTAGATGTCCGTGGATATATCATTTGTCTTATTCCGAGTCCGTATGAGAAAGTTACGCTTATTTTAAGAAATGACACCCGAATGACGCCAAACCATGTGTATCAGCACTAAAGCAACGGATTCCATCAGAACTCCGAAGTTAAGCGTGCTTGTGTGAGAGTAGTACTAGTATGGGTGACCTCCTGGGAAATCCTCGTGTTGCATCCCTCCATTTTGTCTCTCTCTCCCCCCTTTTGACTCGCGCCGCTGCGTCCCTCGTGTTGTGTCGCCCCTTGGGCGAGAGCTGGGGAAAATCGGATGTATCATTTTCTGTAAATGTCCGTGGATATATCATTTGCCTGATTCCGAGCCCGTATGAGAAAGTTACGCCTATTTTAAGAAATGACACCCGAATGACGCCGTAGAATGTTGGACGCGATCATACCAGCACTAAAGCACCGGATCACATCAGAACTCCGATGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATAGGTGACCTCCTGGGAAGTCCTCGTGTTGCATCCCTCGTTTTTGTCTCTCTCTCCCCCCTTTTGACTCGCGCCATTGCGTCCCTCGTGTTGTGTCGCCCCTTGGGCGAGAGCTGGGGAGAATCAGATGTAACATTTTCTGTAGATGTCCGTGGATATATCATTTGCCTGATTCCGAGTCCGTATGAGAAAGTTACGCCTATTTTAAGAAACGACACCCGAATGACGCCAGAGCATGTGTACCAGCACTAAATCACCGGATCTCATCAGAACTCCGAAGTTAAACATGCTTGGGCGAGAGTAGTACAAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCATCCCTCCTTTTTGTCTCTTTCTCCCTCCTTTTTGTCTCGCGCCGCTGCGTCCCTCGTGTTGTGTCGCTCCTTGGGCGAGAGCTGTGGAGAATCGGATGTAACATTTTCTGTAGATGTCCATGGATATATCATTTGCCTGATTCCGAGTCCGTATGACAAAGTTACGCCTATTTTAAGAAATGACACCCGAATGACGCCAAAGCATGTCGGATGCGATCATACCAGCGCTAATGTCACACCCTGTAGTTCTCCTCCTAAGCCAAAAATTGTAATTTATAAATGACCCCAAGAAAATGCAGGTGAAAACAGGAGAAAACCCTAAGAAAATAATGCAAATAATAATCGGATCTGACATGTGGAATTTTTGGTGAGTTCTACACGTCGAAATTCATTAACAGGATTTTTAGTGGAATTTTCAGAGCTCTAGAAATAATTTTAACCAATTAAAATTGAGCAAGCAATATTTTAATTCCAGGGAAAAATCCTTTTTCTTTTTCCTCTCTTTTTCCTCCTTTTTGTCAAATGGGCCGTCGGCCCATTTCTCTTTTCCTCCCCCTCCTCTCTGCTGGGCCGGCCGCAGGCCGAGGCCCAGCCGGCAGTCGGCCGCCCGCCTCCCTCCCTCCCGGGGGTCGCCGACAGGTGGGACCCACCTGTCGGACCCGTCTCCCACCTCCCGCCTCTCCCGCTTGCGCCGCCGCGCCCGTAACGGCCGCCACGCCCACGCCTCCGCCTTCCCCGGGCCACGTCGGCCACGTCCGCACGTGTGCCGCGCTCCCCGCGCCCATTCCCCTCTCTCTCCGCTCGCGCCCGCGCCCGAGATGGCCGGGATTCGAAAATCGAATCCCGCCTCTCTCTCCTTCCCCACTCCCCACGTCGGCCGGCGATTCCCGCCGTTCCCGGCCACGTCCGGCCCTCTCTCCCCTTATTTAAGCTTCACCGCCGCTCCCTCTCACTTTTTCCCCATTGCGCCGATCTCTCCCGAGCTCCCCATCACTCCCGCGCCGTGCAACCACCCGCCGCCGCCGTTTTTCTACTCCGGCCGCCGCTAGCCGCCGCTAGGCTCGCCGCCGTCTTGCGCCGACGCCGCCGTTAGATTCGCGGGGTCAAGATCTACCCCGTCCACCCCTCTTTCGTCGAGGTCCGTCGCCGGAGAGCCGTCCCCGTCGTGTGCCGGTGAGTGACGCCATGGCCGCCGCCTTCGGCCGGCGCCCTCGCTCTCTCGCACTCTCCTCTCTCCCTCTAATCCCTCTCCTTTTGTTCGTTAGGAGGTTCCGGAGCTCGTCCCGCCGTCGTCGTCGTCCTCAGTCGGCCGCCGTCGTCGACCGTTGTCGGTGAGGCCCCTCCTCCTCTTTCTCTCTCTCTCCCGCACCGTGTAGCCGCATGCGCGCCGCCGCCGCGTGAGCCCCGCGCCGCCGGCGCCATGGTCGCCGGTTCGGCTTGCGCCGTGCCCGCGCGCCCCGGCCGCGAGCTCCCGCCGCCGTCCGATCTACCCTTGGGTAGATCGGGGCCGTCGGTTCGGCCGCCACGTGGAGCCGCCGCCTCTCTCCTCCCCGTGTCGCTGATCGGTGGGCCCCGCATGTCGGCGCCGCACCCCCCCCCCCGTGCTGACGTCAGCCCTGGTTAATATTGCGCAATAAATTATTTAAGGATTTTTGTTATAGTAATAAACACAGTGAATCTTCTAAAATTCATAACTAATTCATCCGAGCTCCGTTTAAGCCCATTCAAGTCTCAATAAATCAAGAAAAATGTGTAGAATCCATTAAAAATGGTTTTGTTCTCTGTTTCAGTAGTCTTATAGCCTGTTTGCAATGTTTGCTTTGTATGTCGCTAGATTCCGATCCCTCCGACGCTCCGGTGTACTTCGAAATAGTCGCCGAGGTTCCTCCAGCAGCAGAGCAAGGCAAGTCATGCTTGTCACTTGAACATGTTGATCCTATATTGCAAATGCTCTATTGTTTCCTTTCAAATATTGCATTGTTTTATAATATTACTATGGGATGGTTACCTTTTGTTACAGCCATAATTGTGATACCATGCTCCTTTGTTAGCTTGGGTTATAACATGATTAGAGTTTGGACTAGGAATTGCTTAGCCATGCTTAGTTCAACTAGTTCACAATGGGGAAAATCATATTAATGTTTAGACGGTTAGTTCTAATGATAATGTTGGATTAGTACCACCGCTCTGGTGTTGGTTAATTAAAATGAACCACATGGTGGGCTGTGGGTGCATGGTTTTGCTGGTCGCACCCATGGCAGTTAAGGACCGGTTCGCGGGATGCCCTGGAAGAACTTATCGTACTTACCACAAGCCAGCGTGGGCAACGGCTGAGCTTGTAGTGTAGCTTTCCTCTAGCCGACGCATCCAGGCAAGGGTGGGCGTGATGGAGTTTGGATGGGCCCTGCGACGGCCTATGCGGCTTCCGGATTCACCTAGGCACGAGAGGGGACTGCCCGCTGCCTTGCGAGGAGTGGGGGTGAAACCTGAGGTGTAGTGTGCTTGGTTAGAGGGGGTAATGCGAATGGTCCTGTCACGGCCTCTTTCCGGTATGTCGTGGTGGCATGTCGGGCACGGAAACGTGTCGTGGGGCTGTGTCTTGTGGGTACAGTTGTACACCTCTGATCAGAGTAAAACTATTCGAATAGCCGTGCCCGCGGTTACTGGGCGGTCAACCAGATTCACCGTGATTAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATGTATGGTCGCTCATCGAGCACACTCTGGGCAAAACATATTTAGCGGTTTCAACAATGAGCTACTAAGTGAGGCCTTAGGCGTCAATGCATTGGTAGCAAAGAGGCTACAAGCGCCAAAACGACCAAAGAGGAGAGATCATACGGGTAAAGAATGGCCTTAAACTGTTGAGACCTGCTTTTGCACAACAACAGGAACAAGCACAACAGCAGGAACAAGCACAAGCTCAATACCAAGTTCAGTACAGTGAAGAACAACAACCATCTACGCGTTGCAACGGTTTAGATGAGAACTTCTGCACAATCAAGGCAAGGTTGAACATCGAAAATCCTAGCCATGCTGATACTTACAACCCACGTGCTGGAAGGATCACACGTCTCAACAGTCAGAAGTTCCCCATTCTTAACCTTGTACAATTGAGTGCTACTAGAGTAAATCTATACCAGGTATTTATCAAAGTGGAGTTTTGTTCACTCTCCATCTCTGTCCCCCCTATATTTCTATAAAAATAGTTTTATCTGTGCCACCATTTATATATAACATTGTTCTCTACTCTCTACAGAATGCTATTCTCTCTCCGTTTTGGAACGTTAATGCCCATAGCCTGGTGTATATCGTTCAAGGGCATGCTCGAGTTCAGGTCGTTAGTAACCTTGGAAAGACGGTATTCAATGGCGTTCTACGTCCAGGTCAATTGCTGATCATTCCGCAACACTACGTTGTCTTGAAGAAAGCAGAGCATGAAGGATGCCAATACATTTCATTCAAGACCAATGCAAACTCCATGGTGAGCCACCTTGCAGGGAAGAACTCAATATTCCGTGCCATGCCAGTGGATGTGATCGCTAATGCTTACCGCATATCGAGGGAGCAAGCACGAAGCCTTAAGAATAATAGGGGAGAAGAGCTCGGTGCCTTCACTCCTAGATATCAACAACAGACCTACCTAGGCTTCTCAAATGAGTCGGAGAACGAGGCCTCAGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006731