Os12g0554800
| Gene Name |
Os12g0554800 |
|---|---|
| Description |
Similar to Polygalacturonase-like protein |
| Version |
NM_001073525.1 GI:115489011 GeneID:4352486 |
| Length |
3118 bp |
| Definition |
Oryza sativa Japonica Group Os12g0554800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 12:22776779..22779896 |
| Sequence Coding Region |
22776780..22777016,22777866..22777986,22778086..22778260,22778347..22778417,22778799..22779469 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008405:22776779..22779896 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008405:22776779..22779896 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>cggcggcctcggccgcggccgcacagcgtgacgatctcggagttcggggcggtgggcgacggggtgacggtgaacacgctgccgttccagaacgccatcttctacctccggtcgttcgccgacaagggcggcgcgcagctgtacgtgccccgggggaggtggctcaccggcagcttcaacctcaccagccacctcaccatcttcctcgagaaggacgccgtcatcatcggcgccaaggaggtatcagaatggccaattgtagaaccgttgccatcatatggccaaggaatcgatcttccaggtgcgaggcatcgcagcttaataaatggacacaatgtgactgatgttgtaattacagggaacaatggaatcatagatggccagggtttgacatggtggaactggtttcgctcgaataagttgaactatagccgccctcatcttgtggagtttgtggattcggaagatattgtgatttcaaacttgacattattgaattcccctgcatggggtatacatccagtgttttgtagcaatgtaatggtccacgatgtcaccattcgaacctcattggatgctccacttaccgatggaattgttccagattcatgctctaatatgtgcattgaagatagcagtattagcgtcgctcatgatgctatctcgttaaaaagtgggtgggataactatggcattaccattggaaggccggcatcagacattcacataagcagagtagatctccaagcctcacttggagctgctcttgcatttgggagtgagatgtctggtggtatttcggatattcatgttgatcaccttaatatccatggttcctctagaggcatcctcttcaagactgcacccggccgtggaggttatataagagatgttgtaatatcagatgtccaaatggaagatgttaatgtcgccattaaattcactggcgattggtcgacacacccagataaccattttgatccttctgcgctcccgatgatcaaccgaatcacactgaagaacatggttggaacaaacatatcagttgctggagttttgtcgggaataaacggtgatccattcaccaatatctgcctctccaacatcagtttctccctagctgattcgacacaatccagctcttggtcttgctccaacatctccggatactctgagttggtctttccagagccttgcccagacctccaccattcatcctccaattcttccatctgcttctcccttcttacctaccatgcccttgctgcagcataa</cdnaseq> |
| Protein Sequence |
<aaseq>RRPRPRPHSVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGG AQLYVPRGRWLTGSFNLTSHLTIFLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGA RHRSLINGHNVTDVVITGNNGIIDGQGLTWWNWFRSNKLNYSRPHLVEFVDSEDIVIS NLTLLNSPAWGIHPVFCSNVMVHDVTIRTSLDAPLTDGIVPDSCSNMCIEDSSISVAH DAISLKSGWDNYGITIGRPASDIHISRVDLQASLGAALAFGSEMSGGISDIHVDHLNI HGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNVAIKFTGDWSTHPDNHFDPSALPMI NRITLKNMVGTNISVAGVLSGINGDPFTNICLSNISFSLADSTQSSSWSCSNISGYSE LVFPEPCPDLHHSSSNSSICFSLLTYHALAAA</aaseq> |
| Gene Sequence |
<dnaseqindica>2..238#1088..1208#1308..1482#1569..1639#2021..2691#gcggcggcctcggccgcggccgcacagcgtgacgatctcggagttcggggcggtgggcgacggggtgacggtgaacacgctgccgttccagaacgccatcttctacctccggtcgttcgccgacaagggcggcgcgcagctgtacgtgccccgggggaggtggctcaccggcagcttcaacctcaccagccacctcaccatcttcctcgagaaggacgccgtcatcatcggcgccaaggttgttcttcttcttcttgttgctcactgcctacacattgtgaatgtttcgttttgattagcatgagcgtttgcatttgcattggtatttgatttgatgggtttgatggacttactaatccatggattggttggccatcatcatattcacctacctgtttgcgacgatgtgcgcggactgacttgattgattgaatgggatattgctgcatgaattgtgggcttatccgtcgatttcgattgcgttactgtagaaaagggtatagcttttggtattcagacggtttttagcggtcagctcgtttgtttggtggaaaatattgcattgaactgatttttaccatatttcgtaaatggtgtaaatttgctagttcgtttaccatgaaaaatgatctcttttggatgaataatattaatttgcttgttgtttgggccttagccagtctagtaaacactggagctgtggagcagtatttactggtaacatgtagccatcccatgtgaaggcagcacagcagctaaggaaagacaatttacgatggcattgttttgaagtcaagccgctatctctaatcatgccgcaattgggatgtagtgctaacaggctggctgatttggattggttgcctgtaatatacaaattttttcgtgtgttctgatggcatctcttaggttactgttccactgcattcttattgaagtgtgaaatgttcgaaaactagtgatgctaccgtgaaatcttatacaagcaaaacaaatcaatgaaaaagagaatacttgtgagaaatggtgccttgctccctatgacaagtattgaaactgactgtatgcctttgcatttttgctacaggaggtatcagaatggccaattgtagaaccgttgccatcatatggccaaggaatcgatcttccaggtgcgaggcatcgcagcttaataaatggacacaatgtgactgatgttgtaattacaggtaaatacagtcttctgtgacatgctaagagtttgttttttcagttcgttgtttttgttattgtatttattttgcattcttaaaatgcacttgctccagggaacaatggaatcatagatggccagggtttgacatggtggaactggtttcgctcgaataagttgaactatagccgccctcatcttgtggagtttgtggattcggaagatattgtgatttcaaacttgacattattgaattcccctgcatggggtatacatccagtgttttgtaggtacgttcacttttattttgtaggtaatgtttggaacatggatccacaaatcaattataggcacgctaagacaattttttctccagcaatgtaatggtccacgatgtcaccattcgaacctcattggatgctccacttaccgatggaattgttccaggtaacactgcattttacctttagacattcattacgtttactttcttttagagaaacattcattactttacaggagtccatgcatcatatttaacccatgtaatctgtaaaattttgtcagttagatatattctacttttctcgtagataaagattacatcataataaatatgtactattattaggaagctgtaaaagaacaggactatcaggcttagaaaacgagatcattactctgataatatgcatcattccaacttcaaatagcaagggaaaacttcaaacttcttatgtcaattgttttcctgatctttctgcccacattggtttgctacggaacatccaaatgttttgacttatttctgttgctttcttggtacagattcatgctctaatatgtgcattgaagatagcagtattagcgtcgctcatgatgctatctcgttaaaaagtgggtgggataactatggcattaccattggaaggccggcatcagacattcacataagcagagtagatctccaagcctcacttggagctgctcttgcatttgggagtgagatgtctggtggtatttcggatattcatgttgatcaccttaatatccatggttcctctagaggcatcctcttcaagactgcacccggccgtggaggttatataagagatgttgtaatatcagatgtccaaatggaagatgttaatgtcgccattaaattcactggcgattggtcgacacacccagataaccattttgatccttctgcgctcccgatgatcaaccgaatcacactgaagaacatggttggaacaaacatatcagttgctggagttttgtcgggaataaacggtgatccattcaccaatatctgcctctccaacatcagtttctccctagctgattcgacacaatccagctcttggtcttgctccaacatctccggatactctgagttggtctttccagagccttgcccagacctccaccattcatcctccaattcttccatctgcttctcccttcttacctaccatgcccttgctgcagcataagtgcataaagtaccaagtgtccatccttcgctgttccagtccttgtacaatccagagaaaaatccaacttttgtcaccatcttccttccaaattctttccaaataggtgtacaaaagaatcaccactcttcttgtgctaccagctttgaggctcatggatggaacaatctatgctggtttgtcaatgaggaagtctagaggggttctctgcacaatgaagtgtttgcttgtacagttaagatttgttcattcaatctgtaagaaaaaaacatttttttttggtagaggggataagtcttagagagtctctccatactactgtcaattttggtcatataaaataaaacatattatgattgagtcaccctgtatatcccaatcaatcttgtgagagcatccaataaaaaaaaacagcatatcacatggt</dnaseqindica> |
| External Link(s) |
