Os09g0394300

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Revision as of 07:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0394300| Description = Glycoside hydrolase, family 9 protein| Version = NM_001069627.1 GI:115478996 GeneID:4346968| Length = 8495 bp| Defi...")
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Gene Name

Os09g0394300

Description

Glycoside hydrolase, family 9 protein

Version

NM_001069627.1 GI:115478996 GeneID:4346968

Length

8495 bp

Definition

Oryza sativa Japonica Group Os09g0394300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14285454..14293948

Sequence Coding Region

14285731..14286444,14293134..14293589,14293791..14293946

Expression

GEO Profiles:Os09g0394300

Genome Context

<gbrowseImage1> name=NC_008402:14285454..14293948 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:14285454..14293948 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccttcaccgtcaccatgctctcctggggcgccatcgacttcgccgccgacatcgccgccgccggcgagtggcgccacgccctcgaggccatcaagtggggcaccgactacttcgtcaaggcccacacccaccccttcgtctactgggccgaggtgggcgacggcgacacggaccactactgctggcagcggccggaggacatgacgacgtcgaggcaggcctaccgcgtggacagggacaacccggggtcggacctcgccggcgagacggcggcggcgctcgcggcggcgtccatcgtgttccgccgctccgacccgcactactcccacctcctcctccaccacgcccagcagctgttcgagttcggggacacctacaggggcagctacgacagcagcatcgaggaggtccggagctactacgcgtcggtcagcggctaccacgacgagctcctgtgggcggcgctctggctccaccgcgccacgggcaaggaggagtacctccgctacgccgtcgacaacgccgactccttcggcggcgtcggctgggccatcaccgagttcagctgggacgtcaagtacgccggcctccaggtcctcgccgccaagctgctgctggacggcgacccgcaggcggcggcgcaccgcggcgtgctggagaagtacagggagaaggcggagcactacctgtgcgcgtgcctcggccgcaacatcaacggcgccgacaacgtcgaccggagccccggcgggatgctctacgtccgccaatggaacaacctccagtacgcctccagcgccgccttcctcctcaccgcctactcccactacctctcctcctcctccgcctccgcctccgcggccctccgctgccccggcggcgcggcggcggcggcggagatggtgtcgctggcgaggtcgcaggcggactacatcctggggcggaacccgctgcggctgagctacatggtggggtacggccgccggtaccccgcccgggtgcaccaccgcggcgcctccatcgtgtcccacaaggaggacggccgcttcatcgggtgcgtgcaggggttcgacgactggttcggccgcggccgcgccaaccccaacgtgctcgccggcgccatcgtcggcgggcccagccgccgcgacgagttccgcgacgaccgcgccaactacatgcagaccgaggcctgcacctacaacaccgcccccatggtcgccgtcttcgccaggctacaccgcctcaccaccgccatcaccacggcggccgcggcggaggatcccgacggcggctcgccggatcggaggagtgtagatagaaggtag</cdnaseq>

Protein Sequence

<aaseq>MAFTVTMLSWGAIDFAADIAAAGEWRHALEAIKWGTDYFVKAHT HPFVYWAEVGDGDTDHYCWQRPEDMTTSRQAYRVDRDNPGSDLAGETAAALAAASIVF RRSDPHYSHLLLHHAQQLFEFGDTYRGSYDSSIEEVRSYYASVSGYHDELLWAALWLH RATGKEEYLRYAVDNADSFGGVGWAITEFSWDVKYAGLQVLAAKLLLDGDPQAAAHRG VLEKYREKAEHYLCACLGRNINGADNVDRSPGGMLYVRQWNNLQYASSAAFLLTAYSH YLSSSSASASAALRCPGGAAAAAEMVSLARSQADYILGRNPLRLSYMVGYGRRYPARV HHRGASIVSHKEDGRFIGCVQGFDDWFGRGRANPNVLAGAIVGGPSRRDEFRDDRANY MQTEACTYNTAPMVAVFARLHRLTTAITTAAAAEDPDGGSPDRRSVDRR</aaseq>

Gene Sequence

<dnaseqindica>7505..8218#360..815#3..158#ccatggccttcaccgtcaccatgctctcctggggcgccatcgacttcgccgccgacatcgccgccgccggcgagtggcgccacgccctcgaggccatcaagtggggcaccgactacttcgtcaaggcccacacccaccccttcgtctactgggccgaggtacgtacgcacagtacaaatactacgtactcccgccactgatcgatcacttcacatattcatactatctcgcgcgcaattcaacacgccatgaattcactctcgctgctgctgctgctaggtggatcgagaatggtagcagtagccattatgacgtgagtgagagagaggctgacgggtgggggccatggtggtgtgcaggtgggcgacggcgacacggaccactactgctggcagcggccggaggacatgacgacgtcgaggcaggcctaccgcgtggacagggacaacccggggtcggacctcgccggcgagacggcggcggcgctcgcggcggcgtccatcgtgttccgccgctccgacccgcactactcccacctcctcctccaccacgcccagcagctgttcgagttcggggacacctacaggggcagctacgacagcagcatcgaggaggtccggagctactacgcgtcggtcagcggctaccacgacgagctcctgtgggcggcgctctggctccaccgcgccacgggcaaggaggagtacctccgctacgccgtcgacaacgccgactccttcggcggcgtcggctgggccatcaccgagttcagctgggacgtcaagtacgccggcctccaggtcctcgccgccaaggtaaacctcctcaattcctctctcactctccgccatgcttgatcaatttactcactcatcactccatggacatcgactagctagctccggttgttaggttggtgagccgccctggccaccaacagtgaccagcctatgacccgtactttttttttttactacacgtaggatgtgttcagtcctaagttaaaattgaaagtttaaagaaattggaacgataagacgtaaaagttagaggtttgtgtatagtaaagttcgatgtgacggaaaaattgtaagtttaaaagaaaaaaggttggaatctaaacaggccggactctcgctctgttctaaaatataaaaattttaaacgatcctcttgatacatatcgaaaagcaatgcagaattaatcggctattttaagatgtattttagaaaataggtaagaatcgttatattttagaatgaaagtaatattttcttctgctgtaaaaatatacggtaaaatcatttgatgtttgacttttttttatcatatcagttagatacattccgtttttaattaggatcgagtgaacgagcgatctgggtttttctccctaacaaaaggggaattaatgtcaccacatggcctatactttccttgctccccaaaagaagccaagtaggatcccacacccctgcaagcactgctcgccgatttaatcatgccttgaacacaaaaccaatataattacgcgcgattagaaacacgaagaaaaatacaaacaagcgtacactctactctgttcccctctgtcatccgtggaaatgtttggacatggagaggcctccaaaagactggactgttcatcgactgaagtccacttgatctctccatcctcgatcgatcagtgagtgagtgagattgtagctgcaatgatggtggttggagaagtgagagagcatatgcatccagtgttgccgtgtactgactctcacatggctgagcatctggggcagtactgcctttaatttccccctgctgaaagctgatgggtttttttatgctaattaagcacgccccttttctgcctgtccacttcagtcttgcatgcacccctgctagcttcaggattagttttcctttcagcattttgaaccatacatgcagctgacccttcacagaagggatgacagaatcattgaaaacatccaaaaattaaacacaaccgcagtgatctgtttaattagggtttgaactcgcaacaacttttgtgacaagtaaaaggtggcttaaccactaaggtaattacccgatcctgtcgtctgaatgacttagtccgttcttggttggaaaaaaagatatcgtctttagcttagtttagtagtagataaagactactagtacctgatctgtcagtctcacattgccattgatcgatcgagagatgatgcgaagattgcaaagtgatcactgcaatgcatggaccgggacacaccaaggttggtcgccgagttgtaaagccagcgaggcacgtggtggtgacacggcgatcgagtttgaattgatgtgtcaccactagccgccgacctggttggttgcttaggtcactagtgtgctattcaggactccctccgtcccgtaatataaaggattttgagtgtttgtttacactgtttgaccacttatcttatttaaaattttttgaaattattatttatttttttttgacttactttattatccaaagtactttaaacacaacttgtcgttttttatatttgcacaaaaaattttttttaataagacgagggatcaaacagtgcaagcaaaaactcaaaatatcttatattataggacggatggagtatgtatctatctactccctccgtttcgaaatatttgacaccgttgattttttagcacatgtttaaccgttcgtaacttttatgaaatatgtaaaattatatgcctacatgaaaatatatttaacaatgaatcaaatgataggaaaagaattaataattacttaaattttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggcgtcaaatatttcgaaacagagggagtatatatctatatgtatcccaaggacgctactgcctgaatgcagcttgttttgctgatgcgagagcgtataagagatgagattgagcatacaaaagatgagatttcttcttcttcctcctcttcttcttccatatgacacgacaagaattgcgagaaatttggggggcatgacttttgtttgctagcttgtaggtagcgtgataggggtccaattgaggccaagagctgacgaccaaaaacttagacatggacggctgaaaatgctccttgcattgagccgggaaaccttgcacgattaatgtccattatttacatatacataaatcacatgctggttgtccatcaaggtggatggtttcagtccggcgtaagtcaagaatgaaactgactatttacgtctactaggaacataggaatttcaccagaaagagctctatatatatgccgccttcatttgaattagagtagtccatttaaactagaatatcccgtgattgtggcatacaagaatcctccgtagcactgcacatacagtagcagccaataatatatgaatccgagtttacgtattaaggtgtgtttagttcacatcaaaattgaaagtttgattgaaattggaataatgtgacggaaaagttggaagtttatgtatgtaggaaagttttgatgtgatggaaaagctggaagtttgaaaaaaagttaggaactaaactaggcattagagtggttgctacttcaactatatatagagaaacaatacaaaaataattcgtaggacgtaggggatttagatcctttgcagtactgcacctacacagtaatagccactaacgtatgagtttggatttgctacctccgtcccataaaaattgaatttttacctttgaacttttgtcccataaaagttatatttttacatttccttgtaatcttccttccttccatcccatctctaacccattgtctcaacattccttttaatcaagtttatgtatggaatgtgtgcatgtactgtattcattaaatagggttattgtagtcatttgtctatcctactaatatgtccttaattccctagaaatttaattttttatgggacggaggtagtatatgttagcaactagtaactgcatagacggtgttgtagataatcccaacaaccttgaagacaagaaagtattgggttactgtagttccaggtcactccctgcagctaggctgcatttttttttctggcctgcaacgcatagagaggatgatgacctgtcaccgggagggccccacgtaggtccaagaattctacacgccgtgacagggcaaccggggggggggggggggtgagttggataggtgtgaggcaaatggcaatgtaggtccaaattaagatcgtcttcatcagccaacagccctggcgtggtcttcacggtgcagtagcgatctccccttttccacatgagagctgcgagcatcacaaatttaatcatttttcctggctagttttgagctttgagatgactcgttttttggccagaaatagattaaagaaaccctgagctgcttgcttcttcaagagtactgtaaagtaacatctaggagtacttcctaaatccaaaaaaatataagaatttgtaaattaattccttcggacacccgtaagatttctagagttttacacgtgattaagaaagtaaataatattattaactacacggaacggttgtgatggatagatattagaaattacgtggaaaaaattaaacgggagatgatagcgattgattgagataatgagtgttcttttggggtttttctttactcccctgttttaactattttaactttctttctttttccttaatgaaatgaaatacaatcctcctgcatttttgaaaaaaaaaaatatattctgagataaattttttaacactagaagttgttgtatttcgagactctcttatttcgttttttaaataaaaaagactaactcttgctgggaaaagagaacctttagattttttgattcaggagcaaataaaccctgtgaaagacttgattggatcaattgtgtgtcacttctaggtccagtactgagatttatatttttttttaaaaaaaacttatgaatggtcgtccatgtggccatgcccccgaaatctgctgaaaattagctatcattgcccaagaaatcactgtagggattttaatttttattgtttttttggactgctagttgctttcaatatatgtagctgctgcgtgagcaactagtcgtaagatgctgacatttttatttggacatgaccgacaacaaagtaattaaaaaaatatatcatatatgtagcgtgccactttccttctccctgggtggcctagttggatataaatgaattgatttaagcgcttactctgtttcaaaaggaaactaaaagaaatgttgtactgactgcatatatagctgatttttcgttgctacatgccatgaagtaattaaaggaagacaattaggtactttttccttttattataccttcaagcaactgagtgcacgcatgattccttattttacaagctactagtatattagattagattagccacacccactcggggaaagacctaatctcttggcacagttagggttggccgaggcccagcgaattaaggttgtctggacccaataatttttaggcacatccactcggggaaatgcccaatctctctaaaagactagtccaatagagaaaggaaaggtggatttctcctcctaagctaaacaaggtggaattattcagaggctcacacggttgccgtccgattttttgcttctttaccaacggttaatagtggaggatatcctcgtcataatctctgtagaacaattccttgatggagtaagcaaatatcgcaatcagagtggttgttgggctcaaagcagaacatttcctctgatttagatcgaacagtttctagattaattaattattaattagcaggagtactatctcttcatgacactccattatatggaagtacgaccgtgtcaacccacaataagcaaaaatatccattattgatgactaactacatcgaaaatgaaagaaaaatatctccaccacaataagttttcatggcgtacagccaggtaatctccatttctccagtagtatactgtagttgtcaccttttttaacatgtggtattagctactggtagtgacgttcctcacaagtttgtggcctttacaacaacaacaaaaagtactcagtataataaactgctttcctagcaaaaagggaaaaatagtacaatgtaataaatagtgaggacgaagtcgatatcaatcttactatacaagtgcacttaaattaaattgggacggagatagtacttgtctattgtttccaacagaatataaaaaaaaaataaagaatcaaactgtttcagaatcaaatcgaatcgaaattaatgggtgtgtttagttcatgttaaaattgaaagtttggttgaaattggaacgatgtgataaaaaagttggaagtttatgtgtgtagaaaagttttaatgtgatgaaaaagttgaaagtttaaaaaaaagtttggaactaaacaatggtggaattgaacacccatgatcatttcctcaaatcaaaatacagagtaagcgcccaaccaatctcccgggcagatgcttgttgggccccacctgtcggcgactttatcgcgcgccgacagcggcgaactggccgagctggaccgcaaactaagctcgaagttgggttgaatgctactactcctaccgtgttcgagttagatcgatcgctgcattgattagccagctcggtcggtcgggtttgtaccagtgttgtggtgttaatgtgtgactcgctcgctcgcaccggccgacctagccacgttccatgctgccacactgtaacaacacgatggacactcgagtagctgacagcaatgctgccttgttcctgattcctctcactgttccatctgattgttgcaaagctatagctatttttttttaaaaaaatatatcacagatataggctttttataaacgtgcgcatacttatctatggacggatctagaacgaaatggaggagctctacttatctattccactctagtttagatcgagtttagtttaattgcaggcgtgcaagtttggattgaggatgcatatgcattaatgcatatggtgaaaatagataagttatagctaaaaaatacctccattgtcatatgtaggatatagctctgtactcatctctatgaacatatacacgcatactattgtacacacatacattctatagtttgcagtaaaatgtttaaattttaaaacttaattttcgagttgattttaggatttcttttcaacatagtctcttcatataaattattttatttcgctaaattataactcgaaaatttgtatttctccaaataaaagataatttatagttgtataatttttctgaactgtcacaggtttagtgttgatcatgatatcggttttgccactgagctgattgatcattggattaatcagctgagagctaatttaattaatcagtgccttaatctgtcatcgtgttgcatgcagctgctgctggacggcgacccgcaggcggcggcgcaccgcggcgtgctggagaagtacagggagaaggcggagcactacctgtgcgcgtgcctcggccgcaacatcaacggcgccgacaacgtcgaccggagccccggcgggatgctctacgtccgccaatggaacaacctccagtacgcctccagcgccgccttcctcctcaccgcctactcccactacctctcctcctcctccgcctccgcctccgcggccctccgctgccccggcggcgcggcggcggcggcggagatggtgtcgctggcgaggtcgcaggcggactacatcctggggcggaacccgctgcggctgagctacatggtggggtacggccgccggtaccccgcccgggtgcaccaccgcggcgcctccatcgtgtcccacaaggaggacggccgcttcatcgggtgcgtgcaggggttcgacgactggttcggccgcggccgcgccaaccccaacgtgctcgccggcgccatcgtcggcgggcccagccgccgcgacgagttccgcgacgaccgcgccaactacatgcagaccgaggcctgcacctacaacaccgcccccatggtcgccgtcttcgccaggctacaccgcctcaccaccgccatcaccacggcggccgcggcggaggatcccgacggcggctcgccggatcggaggagtgtagatagaaggtagtggtggtggtggtggttttaatttgggcgggaaaaattcttttttcttttctcgtatactttgccttcttttctgcttaaaaacttcactaaatttttttgaagtgttaatatgagagagagagaggtaaagagaggggatttgattattattattattattagtgaaaaagaaacaagaaaaagatagtggatgggtgttataattaaggaggagatgaaggtgaaaattagttacttgtatttttgaggttaggtctaagaagtcagaactgaac</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0394300, RefSeq:Os09g0394300