BGIOSGA006748

From RiceWiki
Revision as of 02:45, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006748| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006748, complete gene.| tag = P0613F0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006748

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006748, complete gene.

LocusTag

P0613F08.25

Ensembl Transcript ID

BGIOSGA006748-TA

Ensembl Protein ID

BGIOSGA006748-PA

Length

3765

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:9883428..9887192

Sequence Coding Region

9886704..9887192,9885474..9886166),complement(9883428..9883493

Genome Context

<gbrowseImage1> name=IndicaChromosome02:9883428..9887192 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:9883428..9887192 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGACGGCGGCGGCGGCGGCCTGTGCGAGCTCTTCTCCGACGACCACCGCGACATCCGCCACGTCGCGGACGCCGACCTGTTCCGCATCCTCGAGACGTGGGAGGAGTGCATCAATGGCGGCGCCGGCGGCGGAGGCGGTGGGGTTTCTTTAGCTGGTGTGGCTGATCAGGGAGCCGCTGCGGCCAGCACCGGCGCCGGCGGTGGTGCAAGGACGACGACGACGACGACCGCCGCGAACGGTCGGCGGCGGGAGGGCCGCGACGAGGAGAAAGGCGGCGGCGGTGGCGGTGGTCCTCCGGCACAGAAGAAGCAAAAGGGGTCGTCGTCGTCGTCGTCGTCTCCGGCGGCGTTGGCGGCGGCGGTGGGGGACGGCGATGGTGCGGCGAAGATGTCGCACATCACGGTGGAGCGCAACCGGAGGAAGCAGATGAACGAGCACCTCGCCGTCCTGCGCTCGCTCATGCCATGCTTCTACGTCAAGAGGGGAGATCAGGCGTCAATCATAGGAGGGGTGGTGGATTACATCAAGGAGCTTCAGCAAGTGCTTCGCTCGCTGGAGGCCAAGAAGAATCGGAAGGCCTATGCCGACCAGGTGCTCAGCCCGCGGCCGTCGCCGGCGGCGGCGGCGCTCATGGTCAAGCCCACGCCGCCGATCAGCCCGCGGTTCGCCGCCGCCGCCGCCGCCGGGGTGCCGATCAGCCCACGGACGCCGACCCCGGGCAGCCCGTACAACAAGCATGCCGCCGCCGCCGCCACCGCTCGCCCGCCGCACCCGGCGGCCGCGACGTCGTCGTGCTCGGTGGCGTACAGCATGTCGCCGGCCATGACGCCCACGTCGTCCTCGTCGACGACGACGACGACGACGCACGAGCTCTCGCCGGCGCCGGCGTTCCTGCCCATCCTCGACAGCCTCGTCACCGAGCTCGCCGCCCGCGGCGGCGCCAGCTGCAGGCCGCTGGTCATCCCCTCCTCCGCCGCCGCCATCGCCGGCATCGTCGGCGTCCCCGACGTGAGGGTGGAGTTCGCCGGGCCGAACCTGGTGCTGAAGACGGTGTCGCACCGCGCGCCGGGTCAGGCGCTCAAGATCATCGCCGCTCTGGAGAGCCTCTCGCTCGAGATCCTCCACGTCAGCATCTGCACCGTCGACGACGCCACCGTCCTCTCCTTCACCATCAAGATTGGGATCGAGTGCGAGCTGAGTGCAGAGGAGCTGGTGCAAGAAATTCAGCAAACTTTCTTGTGA</cdnaseq>

Protein Sequence

<aaseq>MADGGGGGLCELFSDDHRDIRHVADADLFRILETWEECINGGAGGGGGGVSLAGVADQGAAAASTGAGGGARTTTTTTAANGRRREGRDEEKGGGGGGGPPAQKKQKGSSSSSSSPAALAAAVGDGDGAAKMSHITVERNRRKQMNEHLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLRSLEAKKNRKAYADQVLSPRPSPAAAALMVKPTPPISPRFAAAAAAGVPISPRTPTPGSPYNKHAAAAATARPPHPAAATSSCSVAYSMSPAMTPTSSSSTTTTTTHELSPAPAFLPILDSLVTELAARGGASCRPLVIPSSAAAIAGIVGVPDVRVEFAGPNLVLKTVSHRAPGQALKIIAALESLSLEILHVSICTVDDATVLSFTIKIGIECELSAEELVQEIQQTFL</aaseq>

Gene Sequence

<dnaseqindica>1..489#1027..1719#3700..3765#ATGGCGGACGGCGGCGGCGGCGGCCTGTGCGAGCTCTTCTCCGACGACCACCGCGACATCCGCCACGTCGCGGACGCCGACCTGTTCCGCATCCTCGAGACGTGGGAGGAGTGCATCAATGGCGGCGCCGGCGGCGGAGGCGGTGGGGTTTCTTTAGCTGGTGTGGCTGATCAGGGAGCCGCTGCGGCCAGCACCGGCGCCGGCGGTGGTGCAAGGACGACGACGACGACGACCGCCGCGAACGGTCGGCGGCGGGAGGGCCGCGACGAGGAGAAAGGCGGCGGCGGTGGCGGTGGTCCTCCGGCACAGAAGAAGCAAAAGGGGTCGTCGTCGTCGTCGTCGTCTCCGGCGGCGTTGGCGGCGGCGGTGGGGGACGGCGATGGTGCGGCGAAGATGTCGCACATCACGGTGGAGCGCAACCGGAGGAAGCAGATGAACGAGCACCTCGCCGTCCTGCGCTCGCTCATGCCATGCTTCTACGTCAAGAGGGTAATTAATCCATTCATTCTAATTACTAGCTTAGCTTAGCTCGCACTAAGCATAGTTTAGTGTCACTGTGTGTGTTGCACTACTAGCTAATGAAGCTAGAATGGCTCATGGGATTTTGATACTATGTATCTATAGCTGTAGCATCTAGAGTAACTTTTTTTTCCCTGATCGTGTACGTGCTGCTGCAACAGTTGCATGATTGTGTCCCATGTACATGGTACAGGACCAGCAATCAACCGTTGATGCTGCTGGTGCTGCATGCTTGAACTGCCCTAGCTTAGCTAGCTACCACCAGCCTACCAATAATTAGTAGTACAACTACTCTTGCATCATTAGAGAATCTATCTAGTACACACAGCTACCAATCCATACGAGAGAGAGAGAGAGATGAAGACACAGTGGCTTGCATCAATTATCTCAGAGAATGTATAGTACAGTGAATCATTGGTTGAACAAATTAATGGAGATTAATCACTTGAATAGATCAGTGCAATTAATTTAAATCTGATTTGTGTGTATTATTAATTGTGGGTGCAGGGAGATCAGGCGTCAATCATAGGAGGGGTGGTGGATTACATCAAGGAGCTTCAGCAAGTGCTTCGCTCGCTGGAGGCCAAGAAGAATCGGAAGGCCTATGCCGACCAGGTGCTCAGCCCGCGGCCGTCGCCGGCGGCGGCGGCGCTCATGGTCAAGCCCACGCCGCCGATCAGCCCGCGGTTCGCCGCCGCCGCCGCCGCCGGGGTGCCGATCAGCCCACGGACGCCGACCCCGGGCAGCCCGTACAACAAGCATGCCGCCGCCGCCGCCACCGCTCGCCCGCCGCACCCGGCGGCCGCGACGTCGTCGTGCTCGGTGGCGTACAGCATGTCGCCGGCCATGACGCCCACGTCGTCCTCGTCGACGACGACGACGACGACGCACGAGCTCTCGCCGGCGCCGGCGTTCCTGCCCATCCTCGACAGCCTCGTCACCGAGCTCGCCGCCCGCGGCGGCGCCAGCTGCAGGCCGCTGGTCATCCCCTCCTCCGCCGCCGCCATCGCCGGCATCGTCGGCGTCCCCGACGTGAGGGTGGAGTTCGCCGGGCCGAACCTGGTGCTGAAGACGGTGTCGCACCGCGCGCCGGGTCAGGCGCTCAAGATCATCGCCGCTCTGGAGAGCCTCTCGCTCGAGATCCTCCACGTCAGCATCTGCACCGTCGACGACGCCACCGTCCTCTCCTTCACCATCAAGGTAAAATACTAATCTACTGTATATTTTATTACTCATCAGATTCATGGAGATCAATCTCTGCATCGTCCATAACATGCTACACTAAATCGATCTCGAAAAACACTCAAAACACATGCGATATTATATTACACGAGACATGCACGCACACGAGTTTAATATATAATCAATGTACACATTAAGCAAGTGCACTGATCAGTGATATGATATCGATCGATTTATTTGAACAGTAATTGGTAGGATGTGTTCATTTCATGTGACCAAGAGTACTACAGTGCTACAGAGCCACACACTGAAACTGAAACTAAGCATGCGTATACGCAGGATTGCATTAATTAAGCCCCAAATCAACATTCAACTGTTCATGTCCTGCATGGATTCTCCTTCTTTGGCCCATAATTCCCTCTCATAGATATATATAAATCTCTACGGTTGTCTCTGCATGTTTAAAACTTCTTCCATTATTCGATGGGTTTCATAAATGCAGGCATACGTATCTGCATGCTGTATAGGCTAAGTTTGTGTTCAGACATTTCTAATGTAGAGCTCAGATACACAGTGAGTGTGTACGTACATACAGGGATTTATAACACAGGCCTGATGCATGAGTATTTATTGGAAATGGCACTTCTGTGTATATATACATTATCTTTGAAAGAGCTCGAGAAACTGCCAGAGCCAGAGCGGGTATAAGTAATTAATATGAACACATAAATATATATTCGGGGATAAATGTCACTACTGGTGCGAAACTATGCATGAGCAGTCGAGCAAAGCACGAGCTGGGAAGAATATGCATGTACACAATAGTAAAAGCTACAGCTTTGGTAGCTGTAGAACGTTGAGTGATTAAGGTCCTCTTTGTTTAGGCTTATAAGCCAACTTATAAGTCAAAAAGTCTAAGCCTAAACAAATAAGCAGCTTTTTCGTTTGGCTTTTTTAAAGTCATAAGCCACTCTTACACTATTAAGTCAAAAGCTAGTTTGGAGAAGCTTTTTTGGCTTATATGAGATAGATGTATGACTCCACCACTAAACTTAGGATATTAAATAAGCAGACTTAAAAATCTAAGCCAATAAGCCTAAGCCTAAACAAAGAGGGCCTAAACCTGCTTGCAAGTTACATGCATATATATATATATATATATATATATATATATATATATATATGTGTATATAGGGAGCGTATCCTATGCACACAGGCCCTCGCGTGTACACACCGTGTACACCAACTAAAAATTATCACGAAAAATTCTAGGAAAATTCATACATGTACTTTCAATAGTATTACATCTACGTGCAAAGTCGCATCTTCAAATTCATTCTACATAGAGAATCACACAAAAGATAAAATTCTGACAAAATTGCAACCTTAAAACTGTCAGATTTTTTGGTTTTTTTGTTACGGCTAAAATATAATGAATTTGATGTTAAGATTTTAACCCTAGGTGTAATACAATTGAAAGTATGTGTATGATTTTTTCTAGATTTTTTGGTGACATTTTTTAGTTGGTGTGCACGTGTGTACACGTGAGGGCCTGTGTGCATAGGATATGTTGCCGTGTATATATATGTATGTATGTATATATATATGTATGTATGTATATATATACATATATATATATATATATATATGTATATGTATGTATGTATGTATATATATGTATATATATGTATGTATATATATATATGTATGTATATATATGTATGTATATATATATACATACATACATATATATATCGTCGATATATATATATATATATATATATATATCTCGACGATATAATGCTTGTTTAGCTAGCTAGCTGTTAATTCTGTTTTACTATATGATATGTGTATGCATGGTAATCAAGCACACAGATCGACACAGTAGAATTTAATTTGCTTGTATATTAATATACATATATTTGAATGCAGTGTTAATTAAGCTGGCTAGTGAACTGACAATGGATTCGTTGATTTGGTTTGTGTTTGTTCATACAGATTGGGATCGAGTGCGAGCTGAGTGCAGAGGAGCTGGTGCAAGAAATTCAGCAAACTTTCTTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006748