Os12g0555100

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Revision as of 10:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0555100| Description = Similar to Probenazole-inducible protein PBZ1| Version = NM_001190077.1 GI:297729284 GeneID:9267850| Length = 1382 b...")
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Gene Name

Os12g0555100

Description

Similar to Probenazole-inducible protein PBZ1

Version

NM_001190077.1 GI:297729284 GeneID:9267850

Length

1382 bp

Definition

Oryza sativa Japonica Group Os12g0555100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:22788867..22790248

Sequence Coding Region

22788966..22789140,22789675..22789976

Expression

GEO Profiles:Os12g0555100

Genome Context

<gbrowseImage1> name=NC_008405:22788867..22790248 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:22788867..22790248 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctccggtctgcatctccgacgagcgttcagttgcagtttcggcggagcggttttggaaggtcttctcgaacccgcccgccatgcccaaggtctgcgctggtttcttcgacgctgctgaggttgagggggatggtgggccgggcaccgttgtcattctgaagtttaaccctgctgttaagcaagggttatacaagacacgtgtggtggcacgtgacaacgcttctcattttctcaagtcagaggtgctggaggtggcgcttggcagggcaggcaagctcaagacacacttgacggagacgaagcttgaggccaccggtgccggctcctgtatggccaagctcagggtggagtgcgagcctgaagacggtggctcgttgtcgccggagaagcagaagataatcctcgagggctacttcggcatgctcaagatgattgagaactaccttgtggctcaccctgccgagtacgcctaa</cdnaseq>

Protein Sequence

<aaseq>MAPVCISDERSVAVSAERFWKVFSNPPAMPKVCAGFFDAAEVEG DGGPGTVVILKFNPAVKQGLYKTRVVARDNASHFLKSEVLEVALGRAGKLKTHLTETK LEATGAGSCMAKLRVECEPEDGGSLSPEKQKIILEGYFGMLKMIENYLVAHPAEYA</aaseq>

Gene Sequence

<dnaseqindica>100..274#809..1110#gcagcaacaactgtacaaacagctggctagcgagctaccatcagtgaccagtagtgtgcattgttagcggtaggaagtgttacgggtcgatcgtcactgatggctccggtctgcatctccgacgagcgttcagttgcagtttcggcggagcggttttggaaggtcttctcgaacccgcccgccatgcccaaggtctgcgctggtttcttcgacgctgctgaggttgagggggatggtgggccgggcaccgttgtcattctgaagtttaaccctggtatgcagacctaaaatattggctcttctattattcgtgcatctgtaataggtacacgcagcctagatagagactagggtgtattgttaataccttgcaaatgttttcgcaatatgatttcgagggtttaaattatagcgttatttatgcatatatgggcacactttcagtagtaatttagtgaggttcacggatttatcattggtgtgtttgtgtggtggtatgtgtgcgtatgttttgtatttcatatcattggcaaaaaattatatacaagcggcattttacaatgtcttctactggcggtagaatcaatctagactatttatttttctattccaatgagttatatctatttataccaccatatcaattatcggtagtacgataatttctccgctaacggtagaacttataaattaacgcttaattaatatcatttataccggtgataataccgttagtataatactatagtagaaaccagtgtaaatgtactaattacatgatagtaacaaatattacaattatttgcagctgttaagcaagggttatacaagacacgtgtggtggcacgtgacaacgcttctcattttctcaagtcagaggtgctggaggtggcgcttggcagggcaggcaagctcaagacacacttgacggagacgaagcttgaggccaccggtgccggctcctgtatggccaagctcagggtggagtgcgagcctgaagacggtggctcgttgtcgccggagaagcagaagataatcctcgagggctacttcggcatgctcaagatgattgagaactaccttgtggctcaccctgccgagtacgcctaaaaataagtgttacaaaccaacataatgcattcatcgcgtgcatgataattaaataacgttcgtgagccacaacaaatccaatttcttgtggtgtttgatttcatgtgggtggttgtgtgtgaaagataacttgtgttatttcagtagttgtcatagtgttgtctgtgtgtgtgtgtgtgtgtgtgatattttcagtgttggtgagatcattttgtttcataagtgaataaaggaatacacaggtgaatgcggtgtgtttggtggagcattta</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0555100, RefSeq:Os12g0555100