Os12g0555200

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Revision as of 10:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0555200| Description = Similar to Probenazole-inducible protein PBZ1| Version = NM_001073527.1 GI:115489015 GeneID:4352488| Length = 1825 b...")
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Gene Name

Os12g0555200

Description

Similar to Probenazole-inducible protein PBZ1

Version

NM_001073527.1 GI:115489015 GeneID:4352488

Length

1825 bp

Definition

Oryza sativa Japonica Group Os12g0555200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:22795367..22797191

Sequence Coding Region

22795442..22795616,22796636..22796937

Expression

GEO Profiles:Os12g0555200

Genome Context

<gbrowseImage1> name=NC_008405:22795367..22797191 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:22795367..22797191 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctccggccttcgtctccgacgagcgcgccgtcgcggtgtcggtggagaggctgtggaaggtctgcttggacgtgcactccctgcccaaggtctgcgccggattcatcgacgccgtcgaggtcgaggggaatggcgggccgggcaccatccacatcatgaagcttaaccctgccgcggacgcagggagcgtatacaagaccaaaatagtggtgtgcgacagcgcaactcacgtgctaaaggttgaggtgttggaggttaagagcagggtgggcaacctcaagtcgcactcgacggagacgaagctcgaggccaccggcgacgccacctgcgtggccaagctcacggtggagtacgagctcgaagacggcgcctcgctgtcgccggagcaggagaagatgatcgtcgacggctacttcagcatgctccagatgatcgaggcgtacctcgtcgctcaccctgctgagtacgcctaa</cdnaseq>

Protein Sequence

<aaseq>MAPAFVSDERAVAVSVERLWKVCLDVHSLPKVCAGFIDAVEVEG NGGPGTIHIMKLNPAADAGSVYKTKIVVCDSATHVLKVEVLEVKSRVGNLKSHSTETK LEATGDATCVAKLTVEYELEDGASLSPEQEKMIVDGYFSMLQMIEAYLVAHPAEYA</aaseq>

Gene Sequence

<dnaseqindica>76..250#1270..1571#agaagcaaaagcagctgagctgagctagctatagccatcacagcaagtgtcaggtggaaactagcttagatagagatggctccggccttcgtctccgacgagcgcgccgtcgcggtgtcggtggagaggctgtggaaggtctgcttggacgtgcactccctgcccaaggtctgcgccggattcatcgacgccgtcgaggtcgaggggaatggcgggccgggcaccatccacatcatgaagcttaaccctggtaggtcccgaatacatattggcacttttttccgcttcttacacttgcatttgttattttaagggggtttttcgaagataacttttacggtaagtatactgttagtataaacaatccaaagatgtaaattgattttactaccaacttaaatcgattgcagtataaaattaagggggggggggtaaaatggtctttctctatgctagataatatctcccacttaagttatctagcatgggttaatagttatctacttcctccgtttcaaattataagatgttttgactttcgtcaaagtcaaattgcttcagttttaactaagtttatagacaaatatagtaatatttacattactaaattagtttattaaattaataattaaatatatttttataataaatttatcttggatcaaaaatattactaattttttctataaaattagtcaaacttgaagcagcttgactttgaccaaagtcaaaacatcttacaacctgaaatggagggagtagcatctattcaacctatctggtcagtaatccaatccgatgcacggacaattaggattactatcagagtgaagatataacacaaaataactatgggtcataatagttgtagttttataaaatttattatgcttttataactttctaataaaaataggatgacattactagtcaataaaaacatacttgtacctaaccactattgagtatgaagaatgaaaaagagtaaaatatatagctagtttttaaacttgtccagagatgttatcaggatctatgaacttgcaaaagacgcatttgagatcataatcttggtttaatgaaccacgtgagtccaaagtgtagctgatagggcaaagccctgaacatccaccatggcagaacatttttatctagcccgctccactacagtaaaatcgatcaatcagtcgtgtgtgccacattaagagatgtgtatatgtcgatgtcaaatgacaattgcaattaataactattacaaaccatatgcagccgcggacgcagggagcgtatacaagaccaaaatagtggtgtgcgacagcgcaactcacgtgctaaaggttgaggtgttggaggttaagagcagggtgggcaacctcaagtcgcactcgacggagacgaagctcgaggccaccggcgacgccacctgcgtggccaagctcacggtggagtacgagctcgaagacggcgcctcgctgtcgccggagcaggagaagatgatcgtcgacggctacttcagcatgctccagatgatcgaggcgtacctcgtcgctcaccctgctgagtacgcctaaaaatattgtggtcatgttactgtggcgtggtcgcatgtgagaagaattattctgtgtttaaggttatgtaataatttcagtattgtgtttttgcttcacgagtgaataaaatacacataagaatgtgttgtgtttgatggttaatatatatggaagattgtggatcagtgtaaaagtagattagaaatataataatatttgtgagtttatttgattacggaggttatctgtactttttataaagttataacact</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0555200, RefSeq:Os12g0555200