BGIOSGA006780

From RiceWiki
Revision as of 02:45, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006780| Description = Glutelin| Definition = Oryza sativa Indica Group BGIOSGA006780, complete gene.| tag = OS02G0249900| tid = BGIOSGA006...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006780

Description

Glutelin

Definition

Oryza sativa Indica Group BGIOSGA006780, complete gene.

LocusTag

OS02G0249900

Ensembl Transcript ID

BGIOSGA006780-TA

Ensembl Protein ID

BGIOSGA006780-PA

Length

1754

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:9427947..9429700

Sequence Coding Region

9429439..9429700,9429065..9429327),complement(9428467..9428949,9427947..9428372

Genome Context

<gbrowseImage1> name=IndicaChromosome02:9427947..9429700 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:9427947..9429700 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCCAGCTATTTAATCCCAGCACAAACCCATGGCATAGTCCTCGGCAAGGAAGTTTTAGGGAGTGTAGATTTGATAGACTACAAGCATTTGAGCCACTTCGGAAAGTGAGGTCAGAAGCTGGGGTGACTGAGTACTTCGATGAGAAGAATGAATTATTCCAGTGCACGGGTACTTTTGTGATCCGACGTGTCATTCAGCCTCAAGGCCTTTTGGTACCTCGATACACAAATACTCCTGGCGTGGTCTACATCATCCAAGGGAGAGGTTCTATGGGTTTAACCTTCCCCGGTTGCCCTGCGACTTACCAGCAACAATTCCAACAATTTTCATCTCAAGGCCAAAGTCAGAGCCAAAAGTTTAGGGATGAGCACCAAAAGATTCATCAATTTAGGCAAGGAGACATTGTTGCACTCCCAGCTGGTGTTGCACATTGGTTCTACAATGATGGTGATGCACCTGTTGTTGCCGTATATGTTTATGACGTAAACAACAACGCCAATCAGCTTGAACCCAGGCAAAAGGAGTTCCTATTAGCCGGCAACAACAATCGGGCTCAGCAACAACAAGTATATGGTAGCTCAATTGAGCAACACTCTGGGCAAAACATATTCAGCGGATTCGGTGTTGAGATGCTAAGTGAGTCTTTAGGCATCAACGCAGTAGCAGCAAAGAGGCTACAGAGCCAAAATGATCAAAGAGGAGAGATCATACATGTGAAGAATGGCCTTCAATTGTTGAAACCGACTTTGACACAACAGCAAGAACAAGCACAAGCACAAGATCAATATCAACAAGTTCAATACAGTGAACGACAGCAAACATCTTCTCGATGGAATGGATTGGAGGAGAACTTCTGCACGATCAAGGCGAGAGTAAACATTGAAAATCCTAGTCGTGCTGATTCATACAACCCACGTGCCGGAAGGATAACAAGTGTCAATAGTCAGAAGTTCCCCATCCTTAACCTCATCCAAATGAGCGCTACCAGAGTAAACCTATACCAGAATGCTATTCTCTCGCCGTTCTGGAACGTCAATGCTCATAGTTTGGTCTATATGATTCAAGGGCGATCTCGAGTTCAAGTCGTTAGTAACTTTGGAAAGACTGTGTTTGATGGTGTCCTTCGCCCAGGACAATTATTGATCATTCCGCAACATTATGCTGTCTTGAAGAAAGCAGAGCGTGAAGGATGCCAATATATCGCAATCAAGACAAACGCTAACGCCTTCGTCAGCCACCTTGCAGGGAAAAACTCAGTATTCCGTGCCTTGCCAGTTGATGTAGTCGCTAATGCGTATCGCATCTCAAGGGAGCAAGCCCGAAGCCTCAAGAACAACAGGGGAGAAGAGCACGGTGCCTTCACTCCTAGATTTCAACAACAATACTACCCAGGATTATCGAATGAGTCCGAAAGCGAGACCTCAGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MAQLFNPSTNPWHSPRQGSFRECRFDRLQAFEPLRKVRSEAGVTEYFDEKNELFQCTGTFVIRRVIQPQGLLVPRYTNTPGVVYIIQGRGSMGLTFPGCPATYQQQFQQFSSQGQSQSQKFRDEHQKIHQFRQGDIVALPAGVAHWFYNDGDAPVVAVYVYDVNNNANQLEPRQKEFLLAGNNNRAQQQQVYGSSIEQHSGQNIFSGFGVEMLSESLGINAVAAKRLQSQNDQRGEIIHVKNGLQLLKPTLTQQQEQAQAQDQYQQVQYSERQQTSSRWNGLEENFCTIKARVNIENPSRADSYNPRAGRITSVNSQKFPILNLIQMSATRVNLYQNAILSPFWNVNAHSLVYMIQGRSRVQVVSNFGKTVFDGVLRPGQLLIIPQHYAVLKKAEREGCQYIAIKTNANAFVSHLAGKNSVFRALPVDVVANAYRISREQARSLKNNRGEEHGAFTPRFQQQYYPGLSNESESETSE</aaseq>

Gene Sequence

<dnaseqindica>1..262#374..636#752..1234#1329..1754#ATGGCCCAGCTATTTAATCCCAGCACAAACCCATGGCATAGTCCTCGGCAAGGAAGTTTTAGGGAGTGTAGATTTGATAGACTACAAGCATTTGAGCCACTTCGGAAAGTGAGGTCAGAAGCTGGGGTGACTGAGTACTTCGATGAGAAGAATGAATTATTCCAGTGCACGGGTACTTTTGTGATCCGACGTGTCATTCAGCCTCAAGGCCTTTTGGTACCTCGATACACAAATACTCCTGGCGTGGTCTACATCATCCAAGGTTTGTATCCTAACAAATATAATCGAGAACTCTATCGATGCAACTAGTAGTTATGATCTCCATGGTCAAATTAATGTTGTATGTACCTTATGTGAACATTATAATTTTTAGGGAGAGGTTCTATGGGTTTAACCTTCCCCGGTTGCCCTGCGACTTACCAGCAACAATTCCAACAATTTTCATCTCAAGGCCAAAGTCAGAGCCAAAAGTTTAGGGATGAGCACCAAAAGATTCATCAATTTAGGCAAGGAGACATTGTTGCACTCCCAGCTGGTGTTGCACATTGGTTCTACAATGATGGTGATGCACCTGTTGTTGCCGTATATGTTTATGACGTAAACAACAACGCCAATCAGCTTGAACCCAGGCAAAAGGTAATTTTTTGAACAAATATTTCCATCAAAGTTGTAATTTTCTATGTTTTTCATATGTTCTTACAATGCAATTCATAGCGTAAAACATTAAATTTTTCATTGATAAAAATTTCAGGAGTTCCTATTAGCCGGCAACAACAATCGGGCTCAGCAACAACAAGTATATGGTAGCTCAATTGAGCAACACTCTGGGCAAAACATATTCAGCGGATTCGGTGTTGAGATGCTAAGTGAGTCTTTAGGCATCAACGCAGTAGCAGCAAAGAGGCTACAGAGCCAAAATGATCAAAGAGGAGAGATCATACATGTGAAGAATGGCCTTCAATTGTTGAAACCGACTTTGACACAACAGCAAGAACAAGCACAAGCACAAGATCAATATCAACAAGTTCAATACAGTGAACGACAGCAAACATCTTCTCGATGGAATGGATTGGAGGAGAACTTCTGCACGATCAAGGCGAGAGTAAACATTGAAAATCCTAGTCGTGCTGATTCATACAACCCACGTGCCGGAAGGATAACAAGTGTCAATAGTCAGAAGTTCCCCATCCTTAACCTCATCCAAATGAGCGCTACCAGAGTAAACCTATACCAGGTATTTATTATAGCACCGTTTTGTTCTCTTCATTTTTTTTGGAAGATCTTTGATTTGTTGCTTATATAACATTATTCTCTACTGATTTCTACAGAATGCTATTCTCTCGCCGTTCTGGAACGTCAATGCTCATAGTTTGGTCTATATGATTCAAGGGCGATCTCGAGTTCAAGTCGTTAGTAACTTTGGAAAGACTGTGTTTGATGGTGTCCTTCGCCCAGGACAATTATTGATCATTCCGCAACATTATGCTGTCTTGAAGAAAGCAGAGCGTGAAGGATGCCAATATATCGCAATCAAGACAAACGCTAACGCCTTCGTCAGCCACCTTGCAGGGAAAAACTCAGTATTCCGTGCCTTGCCAGTTGATGTAGTCGCTAATGCGTATCGCATCTCAAGGGAGCAAGCCCGAAGCCTCAAGAACAACAGGGGAGAAGAGCACGGTGCCTTCACTCCTAGATTTCAACAACAATACTACCCAGGATTATCGAATGAGTCCGAAAGCGAGACCTCAGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006780