Os12g0555400

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Revision as of 10:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0555400| Description = Similar to Raffinose synthase protein| Version = NM_001073529.1 GI:115489019 GeneID:4352490| Length = 1168 bp| Defi...")
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Gene Name

Os12g0555400

Description

Similar to Raffinose synthase protein

Version

NM_001073529.1 GI:115489019 GeneID:4352490

Length

1168 bp

Definition

Oryza sativa Japonica Group Os12g0555400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:22801513..22802680

Sequence Coding Region

22801514..22801896,22802050..22802263

Expression

GEO Profiles:Os12g0555400

Genome Context

<gbrowseImage1> name=NC_008405:22801513..22802680 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:22801513..22802680 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ccgccacgttctctccttccgctcctcccgggaggacgaggtcgggcgcctcatccgctccatcttcaccgagagcggcggcggcaccgccgccttcaacctcgcccgccgccgccgcctcgcccgtcgtcgcggcgctcgcccgccgccgtcgccatttctgatccgttcttgtttcagagcttgcacccggcggcgaagtaccacgacgctgcgatggcgatcggcgggtgtccgatctacgtcagcgacaagccggggaaccacaacttagaactgcttaggaagctcgtactacccagcggctccgggcttcgggtgcgcctccccggccgccccacccgcgaatgcctcttctccgaccaggcgcgcgacggcgcgagggcgccgggtggtgcagggtggccaagaagacgcatgtgcacgatgcggcgcccggaacgctcaccggcgccgtgcgcgctgacgacgtcgacgccattgcgcaggtcgccgatgatggcgacggcgacgacggctgggatggggaggccgtggcgtacatgcaacgggcgcgtgagctggtccggctgccgtgcgacgccgtactgccggtga</cdnaseq>

Protein Sequence

<aaseq>PPRSLLPLLPGGRGRAPHPLHLHRERRRHRRLQPRPPPPPRPSS RRSPAAVAISDPFLFQSLHPAAKYHDAAMAIGGCPIYVSDKPGNHNLELLRKLVLPSG SGLRVRLPGRPTRECLFSDQARDGARAPGGAGWPRRRMCTMRRPERSPAPCALTTSTP LRRSPMMATATTAGMGRPWRTCNGRVSWSGCRATPYCR</aaseq>

Gene Sequence

<dnaseqindica>2..384#538..751#accgccacgttctctccttccgctcctcccgggaggacgaggtcgggcgcctcatccgctccatcttcaccgagagcggcggcggcaccgccgccttcaacctcgcccgccgccgccgcctcgcccgtcgtcgcggcgctcgcccgccgccgtcgccatttctgatccgttcttgtttcagagcttgcacccggcggcgaagtaccacgacgctgcgatggcgatcggcgggtgtccgatctacgtcagcgacaagccggggaaccacaacttagaactgcttaggaagctcgtactacccagcggctccgggcttcgggtgcgcctccccggccgccccacccgcgaatgcctcttctccgaccaggcgcgcgacggcgcgaggtaacaaaaaagatttcaaaattatagtaaatttgtgcgaaatggattctaatttcatgagaatttgggttaattttgatgaaattttgcaccttgctcaagatatggaatctgaacaagtgcggcggcattgtcggggtgtttaattgccagggcgccgggtggtgcagggtggccaagaagacgcatgtgcacgatgcggcgcccggaacgctcaccggcgccgtgcgcgctgacgacgtcgacgccattgcgcaggtcgccgatgatggcgacggcgacgacggctgggatggggaggccgtggcgtacatgcaacgggcgcgtgagctggtccggctgccgtgcgacgccgtactgccggtgacgctcggggcgctcgattacgaggtgttccacgtctgccccgtccgcgctatcgcaatggcgccgggaggcaccgtcgttgcgttcgcgcccgtcgggctccttgacaccgtcgacgccaccgccgccgccgtggcgctcagggtgcatggttgcgaccattttggcgcctacttctcgcggaggccggcgaggtgcacgctcgatggcgccgacgtggggttcacctacgacggcgacacgaggacatgctcacagagggacccgcgtcggattaatttgagccaagggaaaactggtctttaatgattatttctctctcctattcctccaaaaataataaaataatctcaccggtgtccagcagctaattaacagttttttgtgatgccctacagcaaatacacgttcttacgac</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0555400, RefSeq:Os12g0555400