BGIOSGA006793

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Revision as of 02:45, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006793| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006793, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA006793

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006793, complete gene.

LocusTag

OSJNBA0090H18.34

Ensembl Transcript ID

BGIOSGA006793-TA

Ensembl Protein ID

BGIOSGA006793-PA

Length

7726

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:9327484..9335209

Sequence Coding Region

9334613..9335209,9334366..9334414),complement(9329732..9329800,9329570..9329641),complement(9329391..9329464
,9329028..9329305),complement(9328548..9328932,9328346..9328471),complement(9327980..9328084
,9327752..9327826),complement(9327484..9327675

Genome Context

<gbrowseImage1> name=IndicaChromosome02:9327484..9335209 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:9327484..9335209 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTGCTCAAGCTCTTGCTCGCCGTCGTCCCGCTCGCCGTCATCGCCGGCGTGCTCGTGTACGTCGCCGGCGTCCCGTGGGCCATCTCCATCGTCGTCCTCGTCGTCGTCTTTGTCGTCGTGCACTGGGCGCGCCGTGGCAGGTCACCGGCGGCGGGAGGAGGAGGAGGAATGGTCCGGGATGATCAAGAACCGACGGTGGCGCGGCCGGCGGCGCCGAGCGCCGTCGTCGTTGTGGTGGCGCCGCCGCTGCCACCGCCGCTCCCGATCCACCGTGTGCCGGCAGCAGCGGTGCAGCCCTCCGCGCCGCCGGTCGTCGCCGACGACGTGGCGCTCTTGGCGTACGCGTACGAGAAGAAGAAGAAGAAGAGGAGAGGGAGCGACGGCGACAGCGGCGGCGGCGACGACGGCGACGGCGGCGGCGAGGAGTGCTCGGTGTGCCTCGGCGAGATGAGGCAAGGGGAGGCGGCGAAGCGGCTGCCGGTGTGCCTGCACGTGTTCCACGAGGAGTGCATCGACATGTGGCTCGGATCGCACGCCACGTGCCCGATATGCCGCTCTCCGGTGGACGCCGGCGCCGTGGCGGCGCGGGTGCAGGTGAATATTGCAGCTAACTTGATTCGATGCTCTTTTCTTATTATAGTTTCTGGTGAAATGCTCCATGTTGCGCAAGCATTCATCGACAAGAACTACCATCCCACCGTTATTTGTAGAGCATACACCAAAGCTCTTGACGATGCTCTATCTGTTCTTGATAAGATTGCTATTCCTGTTGACGTGGACGACCGTGTTGCAATGCTTGGTCTGGTGAAGAGTTCCATCGGTACAAAATTTACTGGTCAGTTTGGTGACCTTATTGCGGATCTTGCTATCGATGCTACCACAACAGCTGGTGTTGACCTGGGTCAAGGCATTCGTGAAGTTGATATCAAGAAGTACATCAAAGTAGAGAAGGTTCCTGGAGGCCAGCTGGAAGATTCCAAGGTTCTTAAAGGAGTTATGATCAATAAAGATGTTGTTGCTCCTGGGAAAATGAGAAGAAAAATAGTTAACCCACGCATCATTCTCCTGGATTGCCCTCTTGAATACAAGAAAGGAGAAAACCAGACCAATGCTGAGTTGATGAAAGAAGAAGATTGGCAGGTGATGCTACAGATGGAAGAGGAATATATAGAGAACCTGTGTGCACAGATTCTGAAATTCAAGCCTGATTTGGTTATAACAGAGAAAGGGTTGAGTGACCTAGCAGTCCATTATTTAGGAAAGGCTGGTGTAAGTGCAATTCGAAGGCTCAGGAAGACGGACAACAACAGGATCGCAAAGGCTTGTGGAGCAGTTATAGTGAATAGGCCAGAGGAACTTCAAGAATCTGATGTAGGAACAGGAGCTGGCCTCTTTGAGGTCAAGAAGTTTGGTGACGAGTTCTTTGCCTTCATTGTTGACTGCAAAGATCCCAAAGCATGTACTGTTTTGTTGAGGGGAGCAAGCAAGGATGTCTTGAATGAGGTTGAGAGGAACTTGCAGGATGCTATGTCTATGGCAAGGAACATTTGGAAAAACCCTAAACTGCTACCTGGAGGTGGTGCTACTGAATTAACTGTATCTGCAACATTGAAACAAAAGAGTTCTTCAGTTGAAGGTGTAGAGAAGTGGCCCTATGAAGCTGCCGCATTAGCATTTGAGGCAATTCCAATAACTCTTTTACAGAATTGTGGCCTGAACATTATTAGGACAATGACACAACTTCAGGGAAAGCATGCAAATGGTGAAAATGCTTGGGTTGGCATTGATGGAAGCAGTGGTGATATTGTGGATATGAAAGAGCGGAAGATCTGGGACTCGTACAGTGTCAAGGCGCAGACATTCAAGACAGCTATTGAGGCTGCCTGCATGCTCCTGAGGATCGATGATATTGTCAGTGGCATCAAGAAGAAGCAAGCTCCTGGAGCCAGTTCAGCTCCAAAGCAACCTCAAATAGAACAAGAGGGTGATGCAGACAATGAACAGATGATCCCAGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MLLKLLLAVVPLAVIAGVLVYVAGVPWAISIVVLVVVFVVVHWARRGRSPAAGGGGGMVRDDQEPTVARPAAPSAVVVVVAPPLPPPLPIHRVPAAAVQPSAPPVVADDVALLAYAYEKKKKKRRGSDGDSGGGDDGDGGGEECSVCLGEMRQGEAAKRLPVCLHVFHEECIDMWLGSHATCPICRSPVDAGAVAARVQVNIAANLIRCSFLIIVSGEMLHVAQAFIDKNYHPTVICRAYTKALDDALSVLDKIAIPVDVDDRVAMLGLVKSSIGTKFTGQFGDLIADLAIDATTTAGVDLGQGIREVDIKKYIKVEKVPGGQLEDSKVLKGVMINKDVVAPGKMRRKIVNPRIILLDCPLEYKKGENQTNAELMKEEDWQVMLQMEEEYIENLCAQILKFKPDLVITEKGLSDLAVHYLGKAGVSAIRRLRKTDNNRIAKACGAVIVNRPEELQESDVGTGAGLFEVKKFGDEFFAFIVDCKDPKACTVLLRGASKDVLNEVERNLQDAMSMARNIWKNPKLLPGGGATELTVSATLKQKSSSVEGVEKWPYEAAALAFEAIPITLLQNCGLNIIRTMTQLQGKHANGENAWVGIDGSSGDIVDMKERKIWDSYSVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGASSAPKQPQIEQEGDADNEQMIPE</aaseq>

Gene Sequence

<dnaseqindica>1..597#796..844#5410..5478#5569..5640#5746..5819#5905..6182#6278..6662#6739..6864#7126..7230#7384..7458#7535..7726#ATGTTGCTCAAGCTCTTGCTCGCCGTCGTCCCGCTCGCCGTCATCGCCGGCGTGCTCGTGTACGTCGCCGGCGTCCCGTGGGCCATCTCCATCGTCGTCCTCGTCGTCGTCTTTGTCGTCGTGCACTGGGCGCGCCGTGGCAGGTCACCGGCGGCGGGAGGAGGAGGAGGAATGGTCCGGGATGATCAAGAACCGACGGTGGCGCGGCCGGCGGCGCCGAGCGCCGTCGTCGTTGTGGTGGCGCCGCCGCTGCCACCGCCGCTCCCGATCCACCGTGTGCCGGCAGCAGCGGTGCAGCCCTCCGCGCCGCCGGTCGTCGCCGACGACGTGGCGCTCTTGGCGTACGCGTACGAGAAGAAGAAGAAGAAGAGGAGAGGGAGCGACGGCGACAGCGGCGGCGGCGACGACGGCGACGGCGGCGGCGAGGAGTGCTCGGTGTGCCTCGGCGAGATGAGGCAAGGGGAGGCGGCGAAGCGGCTGCCGGTGTGCCTGCACGTGTTCCACGAGGAGTGCATCGACATGTGGCTCGGATCGCACGCCACGTGCCCGATATGCCGCTCTCCGGTGGACGCCGGCGCCGTGGCGGCGCGGGTGCAGGTGCAAGTGCAAGTGCTATCATGTTAGGACTGTGTGTGTGTTTGTATTGTACGTGTGTTTTGATCAGCGCTTCAGCAGATGTGTTTTCATCTGCATCTACTTTGAGTTGGATCCGTTTGTTGATTGATTTCCTCCAAGCAGAGTATCACTCTCTGAATTTTGACTCCGGATGTGTCATCCTTTCATATTTTATTACAGGTGAATATTGCAGCTAACTTGATTCGATGCTCTTTTCTTATTATAGTTTGTAAGTTGAGCTGGAATGGTTTGCTTGGCTCAACTGAAAATCTTTACCCAAGTAAATGGACATCAGCTTTCACTGGACAGAATGGTCTCACAAATAGAGTGATAAGTCATCAATTCTTTTTTTTTGCGAAATTCATATTGATAGGGCAGAAAAAAAATTACAAGATTACAACCCTGAAAGGTTGTAATCAGGATAAGAAAAAAAGTATACCAACACCCACACACCGACAGTGCCAAGCAACACAAACTCATGAGAAAACTAGCACCAGTCCGATCGCTGCTAAGCGTGACCGACCACCTCTAGGCCAACAAAGGAACTACAACTGTGGATCGCCCAAAAAGTGAACAATTCTAGCTTTGAGGCCTTCAGATCATCAGAGCTTCAGTGCAATATTGCAACACGTTGGTCATATCCTCTTAGATTAAAAAGAAAAGAAGGAAACATGTATGATGCGCATGTTTCGAATTAGATAATGCTTTCAACTCTAATAACAAAGTTCATTCTGCATATCTATCTATATCTTGCAATCCGCATCCTTTCCAGGTAACATGGTAAACGATAAGACTTACAAAAGGTAGATGAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGGCTGCTCACAAGATTAGTGACCTCACTTGCTTGTGGTGCTTTTCCTTCTCTCACAAACATCAAGCATTCTTTTCCATTTACCATCACACGCTTAGACACAGGACTTCCACCCGAAAACCCGAGCCCGTGTCCATCCTTGTTAGGATGAGCGGTGATGGTCTTGTAAAGGGCATCTTTTGAATGGTATGTCTTCATGCATCCATATTTCACCAATGTGCCCAACCTTTCATTCTCTTTCTTAAGAGCTTGCATAGCATCAATATTAGTAGCATAAGAGTTCAAATCAATATTGTAACACCTAGCACAACCATTGCTAGTAGAAGGGTTAGAGGAATTAGAAACCACATTTGGTTGAGAGGTACTATTCCAAAGAGTGTCAAATTGAACTTCAAGATCTTTATGACTTTTGTCTAAACAAGCAAATTTCTCTTGAAGAGTCTCATTGGCATCTCTAAGGCTAGCTAAAGAACCATTAGCAAAATTAAGCTCATTAGCTAGTTGTTCATTTTTAGCACATTCTTTAGCTAAGCTCTCCTCTAAGACAAGGTTTCTTTTCTTCTCAAGAATAAGCAATTCTTCTTGTCTTTCGAGTAATTGTTCTTTACTATCCAAAGCTCTCATTAACTTAGCCAAATGTTGCATAGCGGGTTTGCTAAAGCTCTTAAGCACATCATCTAATTCATTATCACTTTCCTCATCACTAGACTCAACATCAAGAGAAGTGTGAGAGGGCTTTTGAGTCATCACCTTGCGGCCTTGGGCCATGAAGCAAGAGTAGTGATAGGAGTCGTCGTCGTCATCATCACTCAAGTTGTTGAAGAGACGCTCCTTGCTTGAAGAGGATGACTTGAAGGCGACGGTAGCAACACCACCTTCTCCTTCAACCTTGTCTTTTGACTTGGGCTTGGGCTTGACTTCGGGATCTTCTTCATCTCCGGAGTATCACACTTCCGCCATGTGTGCCTCCGCCACATGAGCACGTTCCGGCTTCTTCTTGCCTCCCTTAGCCTTAGCTTCATTTGACTTGGGACAATCGGCAATGAAATGGCCAAATTCGCCACAATTGAAGCACGCTCTCTTTGATTGCCTCTTTCCCTTGTCATCATCCTTCCTCCCTTTGCCATAGCCACTCTTGCGAAGAAAGTGCTTGAATCTCTTGACAATAAAAGCCATTTCTTCATCTTCACTTTCTTCACCACTTGACTCTTCTTCTTGTTTTGCCTTCAAAGCAACTTCTTGATTTTTGATCATGGCGGCATTCTTCACCATTTGTCTCACTTCACGAGCTTCCTCTTCTTGCATCTCATGAGACACAATTCTTCGAAGAATGTCACTTGGGGTGAGCCTCTTGAAGTCTTTCCTTTCCCGTATCATTGAAACAAGAGTGGGATTTCTTGGACCAAAAGCACGGAGAAGTCTCTTGACAACAAAGTGATTTGTCATGTCCTCACTCCCAAGTCCTTTAATCTTGTTGACAAGGATCATCATCCTATCATACATCTCTTGTGGTGTCTCCTTGTCATCCATCACAAATCTTCCTAGCCTTCCTTCCAATAATTCAATCTTTGCCTCACGAACGGCAGGTGATCCCTCATGAGCCAATTGCAAAGTATCCCATATCTCCTTGGCTTCCTCTAGTCCATCAACCTTGTTGAATTCCTCCGGACTCAAGGCGGAGAGAATTGCATTGGAAGCTTGAGCATTGCAGTGGATGAGTTGTTCTTGCTCCGAAGTGAGCTCCATGTCCTCATGAGGTACGTCAATACCTGTACACACGACTTTCCAAATACTTGGATGCAAAGAGATTAGATGCAACTTCATGTTGTGCTTCCAAGCGGCGTAATGTGTCCCATCAAATTGAGGAGCACGCCCGGAAGGCATGGAGACGAAGTTGTGAGAGAGTGGTAAGTTTGCTGTAATCAAAAGGTATAGTGGCTCCCTTGGGAGATGGAGTTCCCTTGCTGCTCGCTCCATCTTCATTTCTAATTTCCCCGTCCTTTCCCCCTAAGTCCGACATCGTGGATCGCTCAAAGCGGTGAAGCTTGAATCAAGAGCACCTTGCTCTGATACCAATTGAACGCGCAGAGATGTAGCCTAGAGGGGGAGGGGGGGGTGAATAGGCTTTCCTGAAATTTTCTCAACAATCGCAGCGGTTAAATTAACAGGGCCCAGAACCTCCTGGTGAAGAACACCAGAATTTCCTGGCAGAGATGAGCAGCCCGAAACTTCCGGAGTTCTTGAGCCAGGAACTTCTGGGCAACAGAGAAAATCAAAATTTGGGGAAGCAAAACAGCTCCTAGCTATAGACAATCAGGCACAAGGTTGCACAAGATGTAAATCACAAGATACCAGCAGATTCAAACACAGATCATGCACAAGAGAGACAAAGGCGATTTTTTCCCGAAGTTCGGATCACACGGATCCTACTCTCCGTTGAGGTGCTCAAAGAGCCGGGTCTCGATTAACCCCTTGCCTCACTTATGCAAAGATCCCAGAAGAAGTCCACAGCCTTCAACTCAACACTTCTAGGTCATTTACTAGAATTGAGTGACCACCAATATCCAACTCACAATTCCTTCTAGAAAAGACCACAAGTGCAAGTTGCTCTACCTAGGACAACCTCTGAAAACTCAGCACAAGAATCTTTACTCACTTACCTCGTTTCCTTGCGGAGGTGAGGAAAACCTTCACAAACTTCCCCGGGACATCCACAAGATCTTTGGAAGCTCACGGGCGACACCTAACTTTCTAGGAGAAGATCTCCAAGAGTAATAAGCCCAAGTGACAGCCCACATGGTATCCAAAGTGCTCAAACAAACATAATTTTCAAGGCATCTCCAAAACACTCCTACACTCTAATCTAATCTCTCAATCTCACAAGATAGGCTGTAGATTTGAGTGGAGGAAGCAAAGGAAGCTTGGGAGTGGCTAGAAAACCCTAGAACATGAAAGAACTGAAGTGGAATGGCCAAAGGGTGACCTGGGGACGAAATCCATATATATAACGGCTAGGTGACGTCATCTAGCCGTTACTCACAAGATTGAACTGGAAACCTGCCAGGAGGTTCTGGGCAAAAGTGCCAGGAACTTCCGGGCAGCACTTAGGAAAAAACTAGCTAAACTTCGGTGCCCGGAAGTTCCGGCCAGAACCTCCGGGTAGCCCTCTCTGTCCCGGGGAGAAAATAAACTTTGGTGTCCGGAGGTTCCGGCCAGAACCTCCGGGTAGGCCTCTCTGTCCTGGGGAAAATCATTTCCAAAAAAAAGTTCCAAAAACCTTTAGACTCATGGAAATGATTAAGAGCACTTTGTATACCCTGGAACCACACTTGAAACCCCTCTTAACAGTACGGTTTTTCCTAAACTCAATTTCGAAAGAGAAAAACCTAGTCTAATCACCTTCGATGTTTTTCGCACTTAGGAACATTCAAATTGGGGGGTCTCCTTGCATTCTTAGCCATCACAACTTGCTTTGGGGCTAAACTCCTGTGAATAAACTTGATAAACACGTTAGTCCCCTTTAACCACCTTGTCATTAATCACCAAAACCCACTAGGGGTTTAAGTGCATCTTCAAATATGACAGAATAGCATAACATCTTGTATTTACATTTGAATTTCATGAAATGAATCATTTAGGGTTATCTGACAGATTGACCCACATAAACTGCACAAGCGTCATCCTGGATTAGCTGACCATTTTATCAATATTAAAACATATATGCTGCAAAGATAATATTAGAGAAGTTCACAAATCATATCAAATTAGTATGATCTGAATAAAGACTCATTTCAAGTTGACCTTCCCTGTTTAGAAGGGCCGAAGAATATATGTATGCTTGATCTGTTTTGTTGCTGTACTTAAGCAGTTGTCTGCATGAGCAAATTTCATTTGATTTATGCCCTTCTAATACACGTATGTATTCTTTAGCTGGTGAAATGCTCCATGTTGCGCAAGCATTCATCGACAAGAACTACCATCCCACCGTTATTTGTAGAGGTAATTTTCTGAAGAATTAGAAACATGCCTCTGAAATCAACACCTTCTATATGTCATAGAATTCTTTTTTTTTTCTTTTATTTTTTGCAGCATACACCAAAGCTCTTGACGATGCTCTATCTGTTCTTGATAAGATTGCTATTCCTGTTGACGTGGACGACCGTAAGTAGACTAAGTTCAGCATATCAAATATTTATTTGAATCCTCTGTTCTTGAAGTTCTCTTGGAGATTCATATTAGTGATGCTTTTCATAATTCATAATTTAGGTGTTGCAATGCTTGGTCTGGTGAAGAGTTCCATCGGTACAAAATTTACTGGTCAGTTTGGTGACCTTATTGCGGTAAGTACCTTTCTTTAAATGAAATCAACTCCATTTTCTTCCAGTATCTCTTTTTTAGAGCTGCTAATAAAATTTCTTGCTTCAGGATCTTGCTATCGATGCTACCACAACAGCTGGTGTTGACCTGGGTCAAGGCATTCGTGAAGTTGATATCAAGAAGTACATCAAAGTAGAGAAGGTTCCTGGAGGCCAGCTGGAAGATTCCAAGGTTCTTAAAGGAGTTATGATCAATAAAGATGTTGTTGCTCCTGGGAAAATGAGAAGAAAAATAGTTAACCCACGCATCATTCTCCTGGATTGCCCTCTTGAATACAAGAAAGGAGAAAACCAGACCAATGCTGAGTTGATGAAAGAAGAAGATTGGTAAGGGATCTGAATGCATATTTTAAGTCAAAATAGACAGGCAATTCAAATTCTTCTGTGCATATATTTTACTGTGGTTTAATGGCTTATTGCAGGCAGGTGATGCTACAGATGGAAGAGGAATATATAGAGAACCTGTGTGCACAGATTCTGAAATTCAAGCCTGATTTGGTTATAACAGAGAAAGGGTTGAGTGACCTAGCAGTCCATTATTTAGGAAAGGCTGGTGTAAGTGCAATTCGAAGGCTCAGGAAGACGGACAACAACAGGATCGCAAAGGCTTGTGGAGCAGTTATAGTGAATAGGCCAGAGGAACTTCAAGAATCTGATGTAGGAACAGGAGCTGGCCTCTTTGAGGTCAAGAAGTTTGGTGACGAGTTCTTTGCCTTCATTGTTGACTGCAAAGATCCCAAAGCATGTACTGTTTTGTTGAGGGGAGCAAGCAAGGATGTCTTGAATGAGGTTGAGAGGAACTTGCAGGTGCGCTTATGTTTTCCCCTGTTATGCTGTTATATTCTATAGTGGAAATATATCTTCTAAACTTTCTGGTTTGTAGGATGCTATGTCTATGGCAAGGAACATTTGGAAAAACCCTAAACTGCTACCTGGAGGTGGTGCTACTGAATTAACTGTATCTGCAACATTGAAACAAAAGAGTTCTTCAGTTGAAGGTGTAGAGAAGGTATGATTCAGATTTCAGATAGCCAATGCATGAAACCTGCAGATAGCGAACCTCTTCCTGTATGTGCATGAATACTTTTAGTAGTATTCTTTCTCAAATAGAGCTGTCGATGATGTGTATGATATAGGTCATGTATAACTTTTTCGGGAATACGCAAGGAGCGTATTTTTTCCATAGGTCATGTATAACTTAGCTTGGTGTAATTATCTATGTGATCATTAACTCAACTGATGTAAGTCAACTTTGCTGTCTGTGTACCAGTGGCCCTATGAAGCTGCCGCATTAGCATTTGAGGCAATTCCAATAACTCTTTTACAGAATTGTGGCCTGAACATTATTAGGACAATGACACAACTTCAGGGAAAGGTAAAATCTGATTCTTCATTAATTCAACAAGTTGTCTTCAGTTTTGTGCCTAACATGTATATCATGATATTTTTTAGTTGAATAATATATTGTTTTACAGTTTCCTGTGCTTTATCTTGGATTTGTTTTCACTAACATGCCAAATAATTGCAGCATGCAAATGGTGAAAATGCTTGGGTTGGCATTGATGGAAGCAGTGGTGATATTGTGGATATGAAAGAGCGGAAGGTCTCTCTCCCCCCCTCGTGCTTGTGCTTTTGCGTGTTTGCATTCATCTTGAAACCTCATTATCTATCCTTTTCAGATCTGGGACTCGTACAGTGTCAAGGCGCAGACATTCAAGACAGCTATTGAGGCTGCCTGCATGCTCCTGAGGATCGATGATATTGTCAGTGGCATCAAGAAGAAGCAAGCTCCTGGAGCCAGTTCAGCTCCAAAGCAACCTCAAATAGAACAAGAGGGTGATGCAGACAATGAACAGATGATCCCAGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006793

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