BGIOSGA006796

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Revision as of 02:45, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006796| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006796, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA006796

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006796, complete gene.

LocusTag

OSJNBA0090H18.7

Ensembl Transcript ID

BGIOSGA006796-TA

Ensembl Protein ID

BGIOSGA006796-PA

Length

3913

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:9249359..9253271

Sequence Coding Region

9253102..9253271,9252780..9252995),complement(9252508..9252663,9252365..9252422),complement(9251906..9252223
,9250867..9251106),complement(9250677..9250775,9250548..9250580),complement(9250276..9250461
,9249623..9250190),complement(9249359..9249471

Genome Context

<gbrowseImage1> name=IndicaChromosome02:9249359..9253271 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:9249359..9253271 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACCCAAGCTCACTCAAAATCTTGCTTCCACCAGTTCTGGGATGGACTCCAGATCAAGAGGAGCAGCGATAGCTTCACTGTAGAGCTACTGCCATCCCTTGGTGCAACTATAAACCACTCCAACAAGTTGCAGAAGTTCATCATATCGCCTTATGATCCCCGGTACAGATCCTGGGAGCTGTTCCTTATAGTCCTAGTTGTTTACTCTGCCTGGATTTGTCCGTTTGAACTAGCATTCCTGAGGGACTTACCATCTAAGCTTTTGCTAGTTGAGAACATTGTGGATATATTCTTTGCCATTGATATTGTTTTGACGTTCTTCGTTGCTTATGTCGATAGCAAAACACATCTTCTTGTGGATGACCGAAAGAGAATTGCAATGAGGTACCTATCCACTTGGTTTATCTTTGATGTATGTTCAACAGCACCATTTCAACCAATCATCCTTCTATTTACACACAAGGGGAATGACATTGCTTTCAAGGTACTCAATTTGCTCAGGCTGTGGCGTCTTCACCGAGTCAGTTCACTATTTGCCAGGCTGGAGAAAGACATCCGATTCAACTATTTCTGGACTAGGTGCTCAAAACTTATTTCTGTGACCCTCTTCGCAGTACATTGTGCAGGATGCTTCAATTATATGATTGCTGACAGATATCCCAACCCAGAGAAAACATGGATAGGAGCTGTGATGTCTACTTTCAGATCAGAGAGCTTATGGACTAGATATATTACTGCTCTTTACTGGTCCATTACAACACTGACAACAACAGGATATGGGGACCTACATGCTGAAAATCCAACAGAGATGCTATTTGATATTGTCTATATGATGTTTAATCTGGGCTTGACAGCTTATCTCATTGGCAACATGACCAACCTAGTTGTCCATGGGACCAGCCGCACCAGGAAATTTAGGGACTCAATCCAAGCAGCATCAGAGTTTGCAGCACGCAATCAGCTACCTGAGAACATAAAGCAGCAAGTGCTATCTCACTTCTGCCTACAATTCAAGACAGAGGGACTCAACCAGCAGGTCATGTTAGACTGTCTACCAAAAGGAATCCGCTCAAGCATAGCATACAGCTTATTCTTTCCAATCATCCGGCAAGCCTATCTCTTCAATGGAGTATCTGGCAATTTCATTGCAGAACTGGTCATGGAAGTGCAGGCTGAGTACTTCCCACCAAAGGAAGATATAATATTGCAGAATGAAGGAGAAGCAGATGTTTACATAGTAGTTTCAGGAGCAGTGAATATAATAACAACAATACATGGGAATGAGCAGGTATATGAGAAAATTGCAGAGGGAGAAATGTTTGGAGAGGTTGGTGCTTTATGTAACATACCCCAGCCATTTACTTGCCGCACAGCGGAGCTATCACAGCTTTTAAGAATAAGCAAAACAAGGCTTAGAGAGATCATTGAAGAAAACAGGGAAGACAGTAACATTCTAATGAACAACCTAGTTCAGAAGCTGAAGCTACGAGAAAGTTTACCTGACATGAATCAACCAGACCGAAGATTCTTGAGCAAGTATGAGCTATTCCACGTTCCTCGAGAAGCATGGCTGCTGAAAAAGTCACAACTACATTACACAGAGCACACAAGTAGGGGTTCTAGTAACAACACTCCAGTATTTGGAGGTGACAGATATTCCAGACAGTTACTTGGAGAAGCAACCCGATCTTCGGCATCAGAAAACGAAAATAGCAGTATGACAGATAAAGAAGAGAACCATGATGAAGTTCACACAAACTGTGAGACCAAAAAAAGAACGGAAGAGCACTGTATCCAGATAAACTCTGAAGATAGCAGCTCCACATACAGTCAGCGAACAATGAATGCAACAGTGCAGACAGGGTCTCCACATAAAACAGAAGAAAACATAACAAGAAGAATTCCAGATGAGTACTACATAAAAGAAGCAAACAAAAGAGTTACAATTCACAAATATCGTCATAACTCAACAGTCTCTGCTGCGCAAAATGGAAAGCTTATCAAGCTGCCTACATCATTGGAGGAACTGTTCAAAATTGGCAGTCAGAAGTTTCAAGGTTTTCATCCTAGAAAGGTGGTCAGTAGAGATTATGCTGAAATAGATGATGTCAGTGTTATCCGCGATGGCGACCATCTATTCCTTCTTGAGATGTAG</cdnaseq>

Protein Sequence

<aaseq>MTQAHSKSCFHQFWDGLQIKRSSDSFTVELLPSLGATINHSNKLQKFIISPYDPRYRSWELFLIVLVVYSAWICPFELAFLRDLPSKLLLVENIVDIFFAIDIVLTFFVAYVDSKTHLLVDDRKRIAMRYLSTWFIFDVCSTAPFQPIILLFTHKGNDIAFKVLNLLRLWRLHRVSSLFARLEKDIRFNYFWTRCSKLISVTLFAVHCAGCFNYMIADRYPNPEKTWIGAVMSTFRSESLWTRYITALYWSITTLTTTGYGDLHAENPTEMLFDIVYMMFNLGLTAYLIGNMTNLVVHGTSRTRKFRDSIQAASEFAARNQLPENIKQQVLSHFCLQFKTEGLNQQVMLDCLPKGIRSSIAYSLFFPIIRQAYLFNGVSGNFIAELVMEVQAEYFPPKEDIILQNEGEADVYIVVSGAVNIITTIHGNEQVYEKIAEGEMFGEVGALCNIPQPFTCRTAELSQLLRISKTRLREIIEENREDSNILMNNLVQKLKLRESLPDMNQPDRRFLSKYELFHVPREAWLLKKSQLHYTEHTSRGSSNNTPVFGGDRYSRQLLGEATRSSASENENSSMTDKEENHDEVHTNCETKKRTEEHCIQINSEDSSSTYSQRTMNATVQTGSPHKTEENITRRIPDEYYIKEANKRVTIHKYRHNSTVSAAQNGKLIKLPTSLEELFKIGSQKFQGFHPRKVVSRDYAEIDDVSVIRDGDHLFLLEM</aaseq>

Gene Sequence

<dnaseqindica>1..170#277..492#609..764#850..907#1049..1366#2166..2405#2497..2595#2692..2724#2811..2996#3082..3649#3801..3913#ATGACCCAAGCTCACTCAAAATCTTGCTTCCACCAGTTCTGGGATGGACTCCAGATCAAGAGGAGCAGCGATAGCTTCACTGTAGAGCTACTGCCATCCCTTGGTGCAACTATAAACCACTCCAACAAGTTGCAGAAGTTCATCATATCGCCTTATGATCCCCGGTACAGGTGAGGTTCACACTGCACTTTCTGTACCTATCACATGCTGCAAGGCATATAAGTAAACAGCAGTTGCTGACATGATCTTTGTTTGCTTTGTCTGTGTGTCTCTCAGATCCTGGGAGCTGTTCCTTATAGTCCTAGTTGTTTACTCTGCCTGGATTTGTCCGTTTGAACTAGCATTCCTGAGGGACTTACCATCTAAGCTTTTGCTAGTTGAGAACATTGTGGATATATTCTTTGCCATTGATATTGTTTTGACGTTCTTCGTTGCTTATGTCGATAGCAAAACACATCTTCTTGTGGATGACCGAAAGAGAATTGCAATGAGGTGTGTTCCTGCGTTACTCATTCCTATGATACTTTCATGTTAGAAACCCCACATTTGGAATTGAAAAAGGCCCAAACGATTCTGCCCTGACATTAGCAAACTACGATCATCTGCAGGTACCTATCCACTTGGTTTATCTTTGATGTATGTTCAACAGCACCATTTCAACCAATCATCCTTCTATTTACACACAAGGGGAATGACATTGCTTTCAAGGTACTCAATTTGCTCAGGCTGTGGCGTCTTCACCGAGTCAGTTCACTATTTGCCAGGTTCAAAATCTTGTCCAGGTTCTCCATAATTTGATGGCGAATCACAAGTGACAACTGCAACAATTTAATCATTCTATTTTATCAGGCTGGAGAAAGACATCCGATTCAACTATTTCTGGACTAGGTGCTCAAAACTTATTTCTGTAAGTCCTTCTGAACAAAAGAAACTTACCTTCTGTGTTCTGTGCAAAAATTTTTCTATCTTGCAAAGTACTAGTTATGTGCCTATAGGAAGAAATAAGCTGGTTCTTATGTGTATAAAATATGTATTGACCAAAATGCAGGTGACCCTCTTCGCAGTACATTGTGCAGGATGCTTCAATTATATGATTGCTGACAGATATCCCAACCCAGAGAAAACATGGATAGGAGCTGTGATGTCTACTTTCAGATCAGAGAGCTTATGGACTAGATATATTACTGCTCTTTACTGGTCCATTACAACACTGACAACAACAGGATATGGGGACCTACATGCTGAAAATCCAACAGAGATGCTATTTGATATTGTCTATATGATGTTTAATCTGGGCTTGACAGCTTATCTCATTGGCAACATGACCAACCTAGTTGTCCATGGGACCAGCCGCACCAGGAAATTTGTAAGTTTCTCTACTTACCAGCAAAAATGTCAATGGCAAATCTTCTGTCTACAGAAAGATCATTCAGAAATGTAGTTTTTAGTGAGATTTATATAGTGCTGAATGCAGCAGATTATGGCAGACAAGTGAAAATTTTAGCATTTGGAATGCCATTACAGATGTGATACACTACCCTTTGATCATAAAAATACAAATAAGCTGCATATGGATGCCATACAAATAAATGATGTCAAAGATCTGAGAACAAACTAGCATTTTTGTTTTATGCGTGGTGGGATGTATGGTTACATATAAAATCATGCTTATTCAAGAGCATCTACACAGTTATACAATTTATATGAATTGTGTCATAGGAATTAGTTATATCTAAGACATCCAGGGGATCAACACCCTAAGAACTAAGCACCATACATTCATAATATCCAATGGGTATCAGAACTATTATAGTTTCATTTACAAAAAAAAATGGTCATGCTGGACCATTCTTTTAAGTTCTTGTGCAAATGGCAGAGGCGGGTTTTCAACCATAGAGCAAAGCAAGGGAATAAATGAATAGAATCCTGTTCTTGTAGTATTCCACAAGGTACAAGTTCTTGTATCCCTACGTCATTTGACCATTCTAAGGGACAACAACATCAACAAAATATCATTCAACTCAAGGGCAAGAATACTAAAAGAGGTCTGAAGTGAATGCAAATAGCATAGTCATCATTTTAACTAAAACGGTTACTACTACCAGCATTGTTGTTCCAATATATGTACTGCTATATTGATGATCCTTTAAAAAATATATGTGCAGAGGGACTCAATCCAAGCAGCATCAGAGTTTGCAGCACGCAATCAGCTACCTGAGAACATAAAGCAGCAAGTGCTATCTCACTTCTGCCTACAATTCAAGACAGAGGGACTCAACCAGCAGGTCATGTTAGACTGTCTACCAAAAGGAATCCGCTCAAGCATAGCATACAGCTTATTCTTTCCAATCATCCGGCAAGCCTATCTCTTCAATGGAGTATCTGGCAATTTCATTGCAGAACTGGTAAAATCATGAAATAATTCAATATTTTCGTAGTACCATACAAAAGCCATACTTTCCAGTCTTTACTAATTGAATATGTTGAACAAAACAGGTCATGGAAGTGCAGGCTGAGTACTTCCCACCAAAGGAAGATATAATATTGCAGAATGAAGGAGAAGCAGATGTTTACATAGTAGTTTCAGGAGCAGTGGTTAGTATTCTATCTCCAATTTAGTTCAGACATGAAATTTCACTAAGGCTTTATCTGTACGCTAATTGCGCTTTTCTTAATGCTTTTTCTATGTAGAATATAATAACAACAATACATGGGAATGAGCAGGTACAGGTTTTCTCTGTATATATCTATTCCAGATATCAGTAAGATTTATTCAGATTTACCAAAAATTATGAATTGTTTGAAAACAGGTATATGAGAAAATTGCAGAGGGAGAAATGTTTGGAGAGGTTGGTGCTTTATGTAACATACCCCAGCCATTTACTTGCCGCACAGCGGAGCTATCACAGCTTTTAAGAATAAGCAAAACAAGGCTTAGAGAGATCATTGAAGAAAACAGGGAAGACAGTAACATTCTAATGAACAACCTAGTTCAGGTATAACTTCAATTTTATTTTCAAACAATTATACTGCATTTAAATACAGCTAATCAGAAGTTAACAACTCTATTCCAATGTACAGAAGCTGAAGCTACGAGAAAGTTTACCTGACATGAATCAACCAGACCGAAGATTCTTGAGCAAGTATGAGCTATTCCACGTTCCTCGAGAAGCATGGCTGCTGAAAAAGTCACAACTACATTACACAGAGCACACAAGTAGGGGTTCTAGTAACAACACTCCAGTATTTGGAGGTGACAGATATTCCAGACAGTTACTTGGAGAAGCAACCCGATCTTCGGCATCAGAAAACGAAAATAGCAGTATGACAGATAAAGAAGAGAACCATGATGAAGTTCACACAAACTGTGAGACCAAAAAAAGAACGGAAGAGCACTGTATCCAGATAAACTCTGAAGATAGCAGCTCCACATACAGTCAGCGAACAATGAATGCAACAGTGCAGACAGGGTCTCCACATAAAACAGAAGAAAACATAACAAGAAGAATTCCAGATGAGTACTACATAAAAGAAGCAAACAAAAGAGTTACAATTCACAAATATCGTCATAACTCAACAGTCTCTGCTGCGCAAAATGGAAAGCTTATCAAGCTGCCTACATCATTGGAGGAACTGTTCAAAATTGGCAGTAAGTAAAATTAAGTTTTAAACTACCTATTTTAACTGTGTTTCGCCTATGCAATTTACTGAGTGGATAGCAGATGTAAATCTGCAATTTACTGTATATCAGCTACGGTAGTATGTATTTACTCTCATCATATATATTCTTCGCATGGCAGGTCAGAAGTTTCAAGGTTTTCATCCTAGAAAGGTGGTCAGTAGAGATTATGCTGAAATAGATGATGTCAGTGTTATCCGCGATGGCGACCATCTATTCCTTCTTGAGATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006796

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA006796&oldid=60348"