BGIOSGA006799

From RiceWiki
Revision as of 02:45, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006799| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006799, complete gene.| tag = P0011H0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006799

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006799, complete gene.

LocusTag

P0011H09.140

Ensembl Transcript ID

BGIOSGA006799-TA

Ensembl Protein ID

BGIOSGA006799-PA

Length

3852

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:9219162..9223013

Sequence Coding Region

9222929..9223013,9222199..9222283),complement(9221829..9221877,9221669..9221744),complement(9221484..9221566
,9220611..9220707),complement(9220437..9220482,9219555..9219622),complement(9219162..9219478

Genome Context

<gbrowseImage1> name=IndicaChromosome02:9219162..9223013 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:9219162..9223013 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTGGCCCACGGGATGCCTCGGCTTCGAGGCCGCCGCCGCCGTCTGCCCCGCGGCCTTCCAGGCGTACCAGAAGTACTACGATATTGTATCAGCGTTTTCAAACGTGAACACACGAGAAGGATTGGCTGAGCTTTCACAAGTTATAGATGGCATGGAAGGATTGAGGGATGCGATATTTAGTGACATCCCCAAGCTCATGTCAGCTCTTGACTTAGATGATGCTCACCGATTCAGTATCTTCTATGATTTTGTCTTCTTCATTTCCCGAGAAAATGGCCAAAAGAACATCTCTGTTCAGAGAGCTGTGGGAGCATGGAGGATGGTTCTAAATGGGAGGTTTCGGTTGCTTGACAGGTGGTGTAACTTTGTTGAGAAGTACCAACGTTACAACATAACAGAGGATGTCTGGCAGCAGCTGCTAGCTTTCAGCAGGTGTGTAAATGAAGATTTGGAAGGTTATGATCCAAAAGGTGCTTGGCCAGTTCTAGTTGATGATTTTGTGGAGCATATGCACAGGATTTATAATTCCTGTGATTGCTCCAGTGCGATGGAATCACAATTGAACATTTCCAATACATTTGGAGGAATAAATCCATTACCTGGATCAAAGAGGAAATGCCCTACTCGTCTTAAACCTAATGAGGATGTGGACCTTTCGGATAATTTTACGCGCTCAGTCCATCTTGCGCCTCTGAAACGGCTGAAGGAGAGCCCTGTCATTACTAAGTATGGAGTTTGGGAATACAATGCAGGTACTCCTTTGGTTCACAGTCCATCAGATTATTGTGAGGATGCAAATTTGCACAACCCAAGAGGTTGTCTTCAGAACTCACCTTCTATCGTCGAAGATTGTTTGTCAAAAGGATTTGAAGGTTGCATTTCAATGAAATGCTCGTTTTAA</cdnaseq>

Protein Sequence

<aaseq>MAWPTGCLGFEAAAAVCPAAFQAYQKYYDIVSAFSNVNTREGLAELSQVIDGMEGLRDAIFSDIPKLMSALDLDDAHRFSIFYDFVFFISRENGQKNISVQRAVGAWRMVLNGRFRLLDRWCNFVEKYQRYNITEDVWQQLLAFSRCVNEDLEGYDPKGAWPVLVDDFVEHMHRIYNSCDCSSAMESQLNISNTFGGINPLPGSKRKCPTRLKPNEDVDLSDNFTRSVHLAPLKRLKESPVITKYGVWEYNAGTPLVHSPSDYCEDANLHNPRGCLQNSPSIVEDCLSKGFEGCISMKCSF</aaseq>

Gene Sequence

<dnaseqindica>1..85#731..815#1137..1185#1270..1345#1448..1530#2307..2403#2532..2577#3392..3459#3536..3852#ATGGCTTGGCCCACGGGATGCCTCGGCTTCGAGGCCGCCGCCGCCGTCTGCCCCGCGGCCTTCCAGGCGTACCAGAAGTACTACGGTGAGCTCTCCGCCCCCTCCCCCCGCCGGATTCGCCTCTTTCGCTGGGGTTGGTGAACTCCCGTGGTGTGGTGTTAGGGTTTCGACCAGGAGAGGGGGAATTGTGGGGGGTTTTCAGTCGGTTGTGCTACTTTTGGGTTTTTTTTTACTTGTCTGTGTTTTGGCGAATTTTGGGGAATTTTGTGCTGTTTAGGTTGATAATTCCGTTGGTCAAGTATCTGATATTTTTAGAGCTTTTTTCTTTTTTTTTTGTCCTAGTTGATGAAAGGATGTCAATGGCTAAGCACTTCTCTAGGGTTTAAAAGACTGCAATAACTTTTAGTTAAGTGTGTGTTAGTAGGAAGACCAATTTTGGAGATAGTGGTCATGGTTGTTTAATCTGTACAACATGGTCTAATTAGAGGCTGTACTAGGCAATTCGTGGTACAATTTACTGTAAACAAAATTATTGGTACAATTCAGTTATCATGTCATGACTCCTTAGCACCTGAAAGCATAATTTGTTACGAAGTACAGAGATGATCTTTGATGCACAGTGATTGAACATCTGTTGGACTCTAGCGTTACTTAGATCATGTTTGCTGAATCCTGAGGTACTCTGATGCTGTCTAAATCTATTAGTTTGATCTTTTTTTTTTTTGGCTAGATATTGTATCAGCGTTTTCAAACGTGAACACACGAGAAGGATTGGCTGAGCTTTCACAAGTTATAGATGGCATGGAAGGATTGAGGTGAGCTATCTTGAATATGCTTTTGTAGGCATTGACAATTATGTGGTGTAAAAAAATGAGGCGTGCTATTTTTTTCTTTTATCACAAGATAGCTTGCACTTCTCACTTCTCACCTTTATTGTATCTTTACTTTTCAGTGATAAGATTTTATGAAATAAATTTTTTTAACTTCTACCTGACATGCCTACCGAGCTAAAGTATCGTTGAGAGTTAGCACAAAAGAAATCGATCCTTGTATCTCCTAATATTCATCTAGGGATGCAGTTTCCTGATACTTCTTTTTCCTTTGGCCTGATTACATTCTCTAATGTTTTCATACAGGGATGCGATATTTAGTGACATCCCCAAGCTCATGTCAGCTCTTGACTTAGTGAGTAATGCTCTCTAAATTGGTTATGCATTTTTTTCATATGCTTTTCAATTCGTTTTGTTGATGGAGAGTTCTCTCTTTTAGGATGATGCTCACCGATTCAGTATCTTCTATGATTTTGTCTTCTTCATTTCCCGAGAAAATGGCCAAAAGAACATCTGTAAGACCACCTATTTTAAGCATGACCATGTATGCTACTTATATAGTTTATATACCCCTAGAAGACTGATAAGAATGCAACCTTTCAATTTCATTATTTTAGCTGTTCAGAGAGCTGTGGGAGCATGGAGGATGGTTCTAAATGGGAGGTTTCGGTTGCTTGACAGGTGGTGTAACTTTGTTGAGGTATGCAAATTTCTGCTTCATAACTGATCTAAAATTTCAATTGTTTCACCTTGAACAATTATTAGGTCTGTTATTCATATGCAATTATTGCTTCGGCATTATTAGTGGGGGGTTCTTTAGTTTGTGAAATTATCATAGGGATTTGCATGGTTTACATATAATTTTTTTCTGGGTTTCTTGTTGATGAATCAACCAACAGTTTCTTTAATAAGAATACCTTAGATATGTGAATGGGGCCAAAGGACAATAATCATCTAGCATGAATAAGTGACTCCATCAGTTTCACTGAAGTGGTGGCTGAACTACACTTTGATGGTTTGAATGTTCGATACATGAAATCATGAATACATGATGACTGTATAGGCTTGTTAAGGTGTATTTGAGCACATCAAATATCATTATCTTTGTGTCATTGCACTTGTATTGCAACACTTACATTTCTTCCAAAATATGAAGTTTGTACTAGTAAAAATATGGTGAAGAAAACTCTAGATTGTGTTGGTCAGTATTTGGTATTGTGCATTTAAATCATTTCAGTTGTACATGTAAATCAACCTTGAATCCTAGGCACTTAACAAAAAAGAAATTCTGGATTGGGGTTAATTTTAATCTAAGATGAGCATGTAGGCCTTCCACTATAGTCTATGGTAGTTATTATAAAAATATTGAGTCGTCTGGGAACTACCTTTATCTTTTGCATTTTCATTCACACGAGAATGTGCAAGGAGTAGACTTTCCTGTATATTTTTAGTTGAGCTGTATCTTTCCTTTCTCAGAAGTACCAACGTTACAACATAACAGAGGATGTCTGGCAGCAGCTGCTAGCTTTCAGCAGGTGTGTAAATGAAGATTTGGAAGGTTATGATCCAAAAGGTAAAGTTTAATCTATTTCATATGATTCTTTTGAGGATTTCTATCATTTATTTGCAGCTTCCTCTGTAGATATAACCCAGTAACAGTTAAGGCAAATCTAATGTTGCTATTCTTTTCTGTTTTCCTAGGTGCTTGGCCAGTTCTAGTTGATGATTTTGTGGAGCATATGCACAGGTTTGTCATTCTTGTCCTTAGTGCTCATTTAGAGTGCTTTCCAATTGAGTTTATTGATTCTGTTCCCATTCCATAAACCTAAAGCATTCAATTTTCTGATATGACAATTCAATTCAATTTAATGGTACTGCAATTGAAAAATGTAGTTTAGAATGGGATATTAATATTAGTATTAGCATTGGTGCGCAAGTACCTTGTGAGTTTTGTCTTCACCCTCAGGTGCCAGAAGTCATGATACCTGTTGTTTTCTGCATCTTGAACCGTATAGCATGGTTTCACTTATATTTATTTTTACTAGGTATATAGTTTTTATGCTTCCTAATATAGGCAATTCACAGAACTTGTGGTAAAAAAAGACCTGACAAAACTTAAATTATTTTATGCAATAAAGCTCCACATTTGCTTCCAACTGTTATGCTTGGTGAATGATTTTAACGGATAGGCAGTTAAGGAGCTTTTGGGATTTAAGATTAGGCACAACTTACTTAAAATAGTTAGCAACTTTGCATTGTACGATGTGGCTATTCTCGCTGCACATGGGATGCATATTAATAGTGATTGTATTTTGAAATAGTAACTATAGAAAATAATGTGACACCAGATTTATCCTACTAAATACATCTTACATGACAATAGATTCGTGGAAGCCTTCTCCCTACTAGTAGTACATAATAAGAAGACTTCCATAATATGTTTACAGATATTTGTATTTCACAAAACGCTTCTATAACTTTTAACATACTCTATGGGCTGGTCTCAATTACTTTTTTCCTAGCTGTATTGCTGCTTATGAGTTTGCTTTTGCAAAATGTAGGATTTATAATTCCTGTGATTGCTCCAGTGCGATGGAATCACAATTGAACATTTCCAATACATTTGGAGGTAATGTTTTGAGGCAACACTACATATACTAGTTATTTAGTCAGCTTTGTAGTTATTCCCAAATTTTGTGTGACAGGAATAAATCCATTACCTGGATCAAAGAGGAAATGCCCTACTCGTCTTAAACCTAATGAGGATGTGGACCTTTCGGATAATTTTACGCGCTCAGTCCATCTTGCGCCTCTGAAACGGCTGAAGGAGAGCCCTGTCATTACTAAGTATGGAGTTTGGGAATACAATGCAGGTACTCCTTTGGTTCACAGTCCATCAGATTATTGTGAGGATGCAAATTTGCACAACCCAAGAGGTTGTCTTCAGAACTCACCTTCTATCGTCGAAGATTGTTTGTCAAAAGGATTTGAAGGTTGCATTTCAATGAAATGCTCGTTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006799

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA006799&oldid=60351"