BGIOSGA006817

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Revision as of 02:46, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006817| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006817, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA006817

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006817, complete gene.

LocusTag

OSJNBB0006L10.5

Ensembl Transcript ID

BGIOSGA006817-TA

Ensembl Protein ID

BGIOSGA006817-PA

Length

3484

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:8698687..8702170

Sequence Coding Region

8701998..8702170,8701405..8701471),complement(8701058..8701152,8700787..8700889),complement(8700093..8700181
,8699569..8699725),complement(8699387..8699462,8699216..8699274),complement(8698935..8699071
,8698687..8698765

Genome Context

<gbrowseImage1> name=IndicaChromosome02:8698687..8702170 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:8698687..8702170 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTGGGGCCGTGCAGGAAGGGATAGTGCGTGAGATGAACGGAGGATTCGAGGTTATGAGCGGGTATGACAGGTCGTCCATGGCGCCGAAGCAGCAGCAGAGGGAGGAGGAGAGCAAGTGGTACGAGGAGGAGATCGACGACGACCTCAAGCTCTGCTACGCTCTCAACAGTGTGTTGCACCGGGGAGCAAGCAAGTACCAGGAGATCGCTCTCATTGATACAAAGCATTTTGGCAAGGCTCTAATAATCGATGGGAAGATGCAGAGTACAGAGGTGGACGAGTTCATCTACCATGAGTCCCTCATACACCCTCCCCTCCTCTTCCATCCCAACCCAAAGACGGTGTTCATCATGGGAGGCGGCGAGGGTTCCGCGGCGAGGGAGGTGCTCCGGCACAACACCGTCCACAGGGTCGTCATGTGCGACATCGACCAGGAGGTGGTGGACTTCTGCCGGACGTACCTGACCGTCAACTGGGACGCCTTCGCCAGCGACAAGCTCTGCCTCATCATCAACGACGCCAGGGCGGAGCTGGAGAAGAGTAGGGAGAAGTTCGACGTGATAGTGGGAGACTTGGCTGACCCAGTGGAGGGGGGCCCCTGCTACCAGCTCTACACCAAGTCATTCTACCAACACATCGTCAAGCCCAAGCTCAACGACCGCGGCGTCTTCGTCACCCAGGCAGGGCCAGCCGGCGTTCTGACCCACAAGGAGGTCTTCTCCTCCATCTACAACACCCTCAGGCATGTCTTCAAGTATGTCAAAGCATACACTGCTCATGTGCCATCCTTTGCTGACACCTGGGGCTGGGTCATGGCATCAGATTATCCATTTAGCATGAATGCTCAGCAAATCAATGAGAGGATCAAGGAGAGGATAGATGGGGAGCTGGTGTACTTGAGTGGGGAGTCCCTCATTTCCTCTACCATATTGAACAAGAGCGTTTACCAGTCGCTGTTGAATGAGACGCATGTGTACACCGAGGATGATGCAAGGTTCATCTACGGACATGGAAGGGCACGTTGTGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MVGAVQEGIVREMNGGFEVMSGYDRSSMAPKQQQREEESKWYEEEIDDDLKLCYALNSVLHRGASKYQEIALIDTKHFGKALIIDGKMQSTEVDEFIYHESLIHPPLLFHPNPKTVFIMGGGEGSAAREVLRHNTVHRVVMCDIDQEVVDFCRTYLTVNWDAFASDKLCLIINDARAELEKSREKFDVIVGDLADPVEGGPCYQLYTKSFYQHIVKPKLNDRGVFVTQAGPAGVLTHKEVFSSIYNTLRHVFKYVKAYTAHVPSFADTWGWVMASDYPFSMNAQQINERIKERIDGELVYLSGESLISSTILNKSVYQSLLNETHVYTEDDARFIYGHGRARCA</aaseq>

Gene Sequence

<dnaseqindica>1..173#700..766#1019..1113#1282..1384#1990..2078#2446..2602#2709..2784#2897..2955#3100..3236#3406..3484#ATGGTTGGGGCCGTGCAGGAAGGGATAGTGCGTGAGATGAACGGAGGATTCGAGGTTATGAGCGGGTATGACAGGTCGTCCATGGCGCCGAAGCAGCAGCAGAGGGAGGAGGAGAGCAAGTGGTACGAGGAGGAGATCGACGACGACCTCAAGCTCTGCTACGCTCTCAACAGGTAAATTAATTTATACTACTCCCTCCGTTTCAGATTATAAATCGTTTTGATTTTTATCAAAGTCAAACTGCTTCAACTTTAATTAAGTTTATAGAAAAAAGTAGTAACATTTTTAACTCAAGACAAATATATTATGAAAATATATTTAATTGTTGATTTAATGAAACTAATTTGGCATTGTAAATATTACTATATTTGTCTACAAACCTAGTTAAACTTGAAGTAGCTTGATTTTAACCAAAGTTGAAATGACTTATAATCTAATACGATGGAGTACCTGTATATTAATTATTACTATCATGCGTGCATCACAAAGAGTTTGTGTTATCGTTGACTGTCAAAATAAAGCAAAAATTTCAGATAGAGGTCCCAGGACAATGCCTACAAATGTAGAAACTTATAATTTCAGTAATCGGAGTACTAAATTGAGTAATTAACGAGATATATAGGTGTCTCTTTCAATCTATGCATTTTGTTGCCATGTGAGAGATGATGTGCTTTGCCTAATTTTCTGGTGATGTGAAAGTGTGTTGCACCGGGGAGCAAGCAAGTACCAGGAGATCGCTCTCATTGATACAAAGCATTTTGGCAAGGTATCTGTCCATTTCTGCCTCTCTTTTTTCTTTCTTTTTTTTTTAAAAAAAAAGAAACACAGAAGTCCTATATATCATTTCTATTCTTGTTTCGTAACACCAACTTGTGTGGTGTAATTTAGTACTCCCTTCGTTTTAAAATATATTAACCTAATACTAGTTAGAAAAATATATTTTAGTACTAGTTTGCTATTTTTAAAAATGAAGAGAGTATGTAACTAGAACACTGATATGACACCCTTTTTCTACCAGGCTCTAATAATCGATGGGAAGATGCAGAGTACAGAGGTGGACGAGTTCATCTACCATGAGTCCCTCATACACCCTCCCCTCCTCTTCCATCCCAAGTACGTCAAATTACCATCGCGCAATCAATGATCTCACAGCTACTTCCTTCATCTCGAAATATATTAACGACTACCTCCGATTCTAGTCAAACACTAATCCAGATTCTTTAGACATGTAAGTATATATAATAAAATGGATTCTAATCTCTCGAAGGTGCGTACGTGCAGCCCAAAGACGGTGTTCATCATGGGAGGCGGCGAGGGTTCCGCGGCGAGGGAGGTGCTCCGGCACAACACCGTCCACAGGGTCGTCATGTGCGACATCGACCAGGTACTCGATGATCGATCTAGATTGCACCGTTGATTGATATATATGCAGTACTACCTCCGTTTCAGATTATAAGGCTTTGTATGTCTAGATTCATTAACATATATATGAATATGGACAATGCTAGAAAGTCTTATAATATGAAAACAGAGGAAGTAATAGATTCTTAGGGCCCCTTTGAATCAAAGGATTTATGTAGGAATTTCATAGGATTTAAATCCTATAGGAAATTTTCCTATTTGGCCCTTTGATTCAAAGGATTGAAGCTTTCCAAATCCTATGAAATTCCTATGGAATGACACATTGCATGTAGATTTTGGAGGAAATTTAGCAAGAGCTCCAACCTCTTGGAAAATTTCCTTTGAGTCTATCTCTCTCATCTGATTCCTGCGTTTTTCCTGCGCTCCAATCAAACGACCATTCCTGTGTTTTTCCTGTGTTTTGCAATCCTCTGTTTTACACTTCAATTCCTGTCAGAATCCTATGTTTTTCCTATTCCTCCGTTTTTTCTACCCTGCGATTCAAAGGGGCTCTTAAATTAAACTGTTGTTTTGTTTCTATGAATGAACGCTTATGCGTGGGTGCGTGATGATAATTATATTAAGCAGGAGGTGGTGGACTTCTGCCGGACGTACCTGACCGTCAACTGGGACGCCTTCGCCAGCGACAAGCTCTGCCTCATCATCAACGACGCCAGGTATGTACCAAATCATATATAGAAGGTGGTCAGGTGGACATACTAGTGTTCTCTATTAAAGATGACGATAAAATTAGAGTATGAAACAAACTATTAACATGTGATTAATTGAGTTTTAAATATTATAAAGTTGGAAAATAGATTTATCTGATATTTTAAAATAATTTCTACGTATAAAGTTTTCGTACAAAATATACCACTTAACAATTTAAAAGCGTGTTAATGAAAATCGAGACAAAATCTGTATCTTAATCTGAAAAAAAGAACGACCATATTAATGCTGCAAACTGAAAATGAATCAGCATCATGTATTCATGTGTACGTATGTTTTCTTGATCGGTGTGTGCTTATATGCATTTGCATGCAGGGCGGAGCTGGAGAAGAGTAGGGAGAAGTTCGACGTGATAGTGGGAGACTTGGCTGACCCAGTGGAGGGGGGCCCCTGCTACCAGCTCTACACCAAGTCATTCTACCAACACATCGTCAAGCCCAAGCTCAACGACCGCGGCGTCTTCGTCACCCAGGTACGTATATAATTTTTCATCAACTCTTTGCCTAGTTATTTGACTGAACTCTGAACTTCTCTGAAATTTTAGCGTTTTTACTGACAGTTGTTTTGGCTGTTGACAGGCAGGGCCAGCCGGCGTTCTGACCCACAAGGAGGTCTTCTCCTCCATCTACAACACCCTCAGGCATGTCTTCAAGTGTGAGTAGCCCAGCAATTAAAGACTCCCTTAATTATATTTTTTGCTATATGCATGGGGTGATTTTGTTTTTGTGATTCTGATGATGCATTTGTTAATCATATCATACCACAGATGTCAAAGCATACACTGCTCATGTGCCATCCTTTGCTGACACCTGGGGCTGGGTCATGGTATGTAGCTAGCCACCTTATTACAATATTACTTACTGAAAAGTTCAGTTCCCTTTCTATTCTTTTTAGATGGTTTTCCTTTCTGCTAGCATCAATTAATTAATCCGTTGCTATTCTTCTTCCTATTATTCCTTTTGTATGTAGGCATCAGATTATCCATTTAGCATGAATGCTCAGCAAATCAATGAGAGGATCAAGGAGAGGATAGATGGGGAGCTGGTGTACTTGAGTGGGGAGTCCCTCATTTCCTCTACCATATTGAACAAGAGCGTTTACCAGTCGTAAGTAACTATCAGTAAAGATCACTGTAAAAAAAAACTACTATACTTATTTTCAGCAACACGTGAAAGATGCAGGTGGCATCGATGCTTAAGTGAAAAGATATTCAGAACATTGCACTGACTGAACTGTAATTTCTTTTCTTTTTCCTTGAAAAAATAATACTCGCAGGCTGTTGAATGAGACGCATGTGTACACCGAGGATGATGCAAGGTTCATCTACGGACATGGAAGGGCACGTTGTGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006817

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA006817&oldid=60369"