BGIOSGA006866

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Revision as of 02:46, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006866| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006866, complete gene.| tag = P0027A0...")
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Gene Name

BGIOSGA006866

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006866, complete gene.

LocusTag

P0027A02.9

Ensembl Transcript ID

BGIOSGA006866-TA

Ensembl Protein ID

BGIOSGA006866-PA

Length

4021

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:7559779..7563799

Sequence Coding Region

7563610..7563799,7563059..7563129),complement(7562787..7562908,7562502..7562684),complement(7561992..7562307
,7561771..7561872),complement(7561258..7561686,7559779..7560558

Genome Context

<gbrowseImage1> name=IndicaChromosome02:7559779..7563799 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:7559779..7563799 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTACCTGTCGGCCTTCTCCTCCTCGGCGTCTTCGCACGGCGGCGGGGACAGCGAGGCCAGGGACAGCTCCACGGTGGTCGCCGTCGACCGGGACAAGAACAGCCAGCAGGCGGTCAAGTGGGCGGTGGACCGGCTCCTCGCCAGGGGCAGCGTTCTCCAGCTCGTCCATGTCAAGCCACAGCAAAATGCTGAAGCAGGAGCGGATGCAGAGATGCAACAGATGTTCATCTCATACAGAGGCTATTGTGCTCGTAAAGGGATGCAATTGAAGGAAGTGATCTTGGATGGCAGTGACATCTCCAAAGCAATAGTCGAGTATGCCACTAGCAACGCCATCACCGACATCGTCGTCGGGGCGTCGACGAGGAACACATTCATCAGAAAGTTCAGAAATCCTGATGTGCCAACATGCTTGATGAAGATGGTGCCTGATTACTGCACAGTGCATGTCATCCACAAAGGGAAGGCAATCCAAGTCAAGGCAGCCAAAGCCCCAGCACCCTTTACCACTCTCCCTCCCAAACAGTACTCACAGTCAAGCATAGAATCTGATGGATATCCGAGATCAAGAGGAGACTGGAAGAAGATTTCCAATCAATCATCTCCAAAGGCAAACAGACCATCGGTGGACCGACTATCTGGCTTTGCAAAAGCTCCAACCAGGGAAAGGCCTCTCTCTGGAGCTAGATCAGCACCCCCAAAGGATTTCGACGACTATATCGACTTCATAGCTCCTCCAAGGCCCTCGGTAACCCGTAGCTCCTTTTCAGATGATGTTGATTTTCCTTTGAGCTTGGAGTTGCCATCGATGGACTTCGGCGATTCTTTGGAGCTTTCGCTTTCCGCATCAATGTCCATCGAAAGCCTAAGCTCAGCTGGGAAGGATGTCGAAACGGAAATGAGACGGCTGAGACTAGAGCTGAAGCAGACAATGGAAATGTACAACTCCGCATGCAAGGAAGCAATTGATGCTAAACAGAAGGCTGCTCAGATGCACCAGATGAAGATGGAAGAGTCCAAGAAGTACCAAGAACTCAGGAATGCTGAAGAGGAAGCCCTTGCTCTGGTCCAAATGGAGAAGGCAAAGTGCAGAGCCGCACTGGAAGCAGCAGAGGCTGCACAGAGAATTGCAGAGCTGGAGGCTCAGAAGAGACTGAGAGCAGAGTGGAAGGCGAAGCGCGAAGCCGAGGAGAGGAAGAGAGCAACAGAAGCAATGAACAACACTGATTTAAGGTACAGGAGGTATTCCATTGATGACATTGAAGCTGCCACCCATAAGTTTGACAAGGCACTCAAGATAGGGGAAGGTGGATATGGGCCGGTGTATAAAGCTGTCATGGATCATACTAATGTCGCCATTAAAATCTTAAGGCCAGATGCATCACAAGGGAGGAAACAGTTTCAGCAAGAGATAGAAGTGCTTAGCTGCATGAGGCATCCAAACATGGTGCTGCTGCTGGGAGCATGCCCGGAGTACGGGTGCCTGGTGTACGAGTACATGGACTACGGCAGCCTGGAGGACCGGCTGTGCCGGCGGGGGAAGACGCTGCCGATCCCCTGGAACATCCGGTTCCGCATCGCCGCCGACATCGCCACCGGCCTCCTCTTCCTCCACCAGGCGAAGCCCGAGCCGCTGGTCCACCGCGACCTGAAGCCGGCCAACATCCTCCTCGACCACAACTTCGTCAGCAAGATCAGCGACGTCGGCCTCGCCCGCCTCGTCCCGCAGTCCGCTGCCGCCGCCGAGGCCACGCAGTACCGGATGACCTCGACGGCGGGCACCTTCTGCTACATCGACCCAGAGTACCAGCAGACCGGGATGCTGACCACCATGTCCGACATCTACTCGCTGGGGATCCTGCTGCTGCAGATCATCACGGCGAGGTCGCCCATGGGGCTCACCCACCACGTCGAGAGCGCCATCGAGAGGGGGACCTTCCAGGAGGTGCTCGACCCGATGGTGACCGACTGGCCGGTGGAGGAGGCCTTGGTGTTCGCCAAGCTGGCGCTGCGGTGCGCCGAGCTGAGGAAGAAGGACCGGCCGGACCTCGGGAAGGAGATCTTGCCGGAGCTCAACCGGCTGCGCTGCCTCAGCCAGGAGTACGACGCCTCCAAGGTCAGCAGCACCAGCACCACCTGCTCCAGCTCCGCTCCCTACAGCTTCGGCGGCGACGACGTCTCCACGCCATGA</cdnaseq>

Protein Sequence

<aaseq>MYLSAFSSSASSHGGGDSEARDSSTVVAVDRDKNSQQAVKWAVDRLLARGSVLQLVHVKPQQNAEAGADAEMQQMFISYRGYCARKGMQLKEVILDGSDISKAIVEYATSNAITDIVVGASTRNTFIRKFRNPDVPTCLMKMVPDYCTVHVIHKGKAIQVKAAKAPAPFTTLPPKQYSQSSIESDGYPRSRGDWKKISNQSSPKANRPSVDRLSGFAKAPTRERPLSGARSAPPKDFDDYIDFIAPPRPSVTRSSFSDDVDFPLSLELPSMDFGDSLELSLSASMSIESLSSAGKDVETEMRRLRLELKQTMEMYNSACKEAIDAKQKAAQMHQMKMEESKKYQELRNAEEEALALVQMEKAKCRAALEAAEAAQRIAELEAQKRLRAEWKAKREAEERKRATEAMNNTDLRYRRYSIDDIEAATHKFDKALKIGEGGYGPVYKAVMDHTNVAIKILRPDASQGRKQFQQEIEVLSCMRHPNMVLLLGACPEYGCLVYEYMDYGSLEDRLCRRGKTLPIPWNIRFRIAADIATGLLFLHQAKPEPLVHRDLKPANILLDHNFVSKISDVGLARLVPQSAAAAEATQYRMTSTAGTFCYIDPEYQQTGMLTTMSDIYSLGILLLQIITARSPMGLTHHVESAIERGTFQEVLDPMVTDWPVEEALVFAKLALRCAELRKKDRPDLGKEILPELNRLRCLSQEYDASKVSSTSTTCSSSAPYSFGGDDVSTP</aaseq>

Gene Sequence

<dnaseqindica>1..190#671..741#892..1013#1116..1298#1493..1808#1928..2029#2114..2542#3242..4021#ATGTACCTGTCGGCCTTCTCCTCCTCGGCGTCTTCGCACGGCGGCGGGGACAGCGAGGCCAGGGACAGCTCCACGGTGGTCGCCGTCGACCGGGACAAGAACAGCCAGCAGGCGGTCAAGTGGGCGGTGGACCGGCTCCTCGCCAGGGGCAGCGTTCTCCAGCTCGTCCATGTCAAGCCACAGCAAAATGGTAATGCTCCATGAATCTGCATGAACCAAAGCTAATCTTGCAATGCAAGAGATATCAGTGAGAGGAAAAAAACACTACTTTTTTTCTTGGTCGAATTGGAGAGATGCAATAATTGGATGTGGAAGAGAATGTGCATGGTTTGCATTGTGCCATCATGCAGTGAAAGTTTGCAGGAAGATGAAGAATTCAGAGACAACAAAATGGGCATGATTTTGTCGACAATGCACATTTTATTTGAAATGCATGTAGTTGTTTGGATTTCATGGGTTAGCTAATATTACGCATTTTGCCATCATGCAATGGAAGTTTGTAGGAAGATGGAAAATTCAGACACGACAAAATGGGCATGATTTTGTCGATAATACGCATTCTTTCAAAATTCTGCATATAGTTTGTTAGATTCCGGTAGCTAATTTATGTATTTTTCTCCAATTTACCCTGGTTTATTTAATTTCATCAACAAATTTCTTCATGCTGCAGCTGAAGCAGGAGCGGATGCAGAGATGCAACAGATGTTCATCTCATACAGAGGCTATTGTGCTCGTAAAGGGGTGAGTGCCAATAGAATATATAATTGCCCCAATATATATACTACTATCTTATCAGATACATGTTTTTTTTTCACTACTAGAATAAGATGACAATAACAAAATCAAATGGAACAAAATAAGCTCAAGAAATACTTACATTGCAAACTGCAGATGCAATTGAAGGAAGTGATCTTGGATGGCAGTGACATCTCCAAAGCAATAGTCGAGTATGCCACTAGCAACGCCATCACCGACATCGTCGTCGGGGCGTCGACGAGGAACACATTCATCAGGTGCATGACTGTTCATTCCTCCATGGCTGTGCTGTGCACCATTCCCCAATCCCTTGATAACCTGTAATAACTGAACACAGTCATGAACCTCGTGTCCTGCAGAAAGTTCAGAAATCCTGATGTGCCAACATGCTTGATGAAGATGGTGCCTGATTACTGCACAGTGCATGTCATCCACAAAGGGAAGGCAATCCAAGTCAAGGCAGCCAAAGCCCCAGCACCCTTTACCACTCTCCCTCCCAAACAGTACTCACAGTCAAGCATAGAATCTGATGGATATCCGAGGTAAGTTTGTCGATAAGGAATAATCGCTTCACTCAATAATTACATTGCAAAATGGTTTGAAGTAATCAGATTCTAAAATCTAAACACCTGTATGCAAATAAGTAGATATAGATATGTTTATCAGTCATGTCACTCGGTTTACCTTCTGAACTTGCTAACATAATACGAAATCATGTTCCGGGTTTGCTGAACAGATCAAGAGGAGACTGGAAGAAGATTTCCAATCAATCATCTCCAAAGGCAAACAGACCATCGGTGGACCGACTATCTGGCTTTGCAAAAGCTCCAACCAGGGAAAGGCCTCTCTCTGGAGCTAGATCAGCACCCCCAAAGGATTTCGACGACTATATCGACTTCATAGCTCCTCCAAGGCCCTCGGTAACCCGTAGCTCCTTTTCAGATGATGTTGATTTTCCTTTGAGCTTGGAGTTGCCATCGATGGACTTCGGCGATTCTTTGGAGCTTTCGCTTTCCGCATCAATGTCCATCGAAAGCCTAAGCTCAGCTGGGGTAAGCAAGCACACCGGCAACATCAGTTTTGCTGCAGTTGATCAAAATCTTGGTGATCTGGAATCTTTTAGAGTATTGGACTTTGATCAACTCTTATTTTTGTGTCGTTTGAAATTCAGAAGGATGTCGAAACGGAAATGAGACGGCTGAGACTAGAGCTGAAGCAGACAATGGAAATGTACAACTCCGCATGCAAGGAAGCAATTGATGCTAAACAGAAGGTCTGCCCACTTCTATGTCGCTGTAAATTTCAACTATTATCTGAAATATTTTGAAACAATAGTGAATAATGATCAAATCAGCAGGCTGCTCAGATGCACCAGATGAAGATGGAAGAGTCCAAGAAGTACCAAGAACTCAGGAATGCTGAAGAGGAAGCCCTTGCTCTGGTCCAAATGGAGAAGGCAAAGTGCAGAGCCGCACTGGAAGCAGCAGAGGCTGCACAGAGAATTGCAGAGCTGGAGGCTCAGAAGAGACTGAGAGCAGAGTGGAAGGCGAAGCGCGAAGCCGAGGAGAGGAAGAGAGCAACAGAAGCAATGAACAACACTGATTTAAGGTACAGGAGGTATTCCATTGATGACATTGAAGCTGCCACCCATAAGTTTGACAAGGCACTCAAGATAGGGGAAGGTGGATATGGGCCGGTGTATAAAGCTGTCATGGATCATACTAATGTCGCCATTAAAATCTTAAGGCCAGATGCATCACAAGGGAGGAAACAGTTTCAGCAAGAGGTAAATCTAATATAGGAGTATCTAGTAAATTCTTCATCTTTTCAGTATATTCAGGGTTGTTTTGAGTTAACATATTAGTACAACCAAACTAAAACTGAATGCAATATTTTCTCTCACCATCAGGAAGCAAATTTTCTCTTTTTTGTTTTTGAAGGATTTAATGATCTGACAATGAGTTAGTTCAGAACATCATTATTTCAATCATATGTTTTTGAAGACATTTTATCTTCCTACCCATATTTACCATTCAAATATCTAAATTATCTGCATGTCAATTATGCAAACGATAGTTATAACCAAGCTCATAAACTGCATGTAGTGAGAGTTTCTTCTTCTTTTTTTTGGGCAGATCAAATATATGATGTCAATTATGCAAAAGATAGTCATGTCATGATCAAGCTAATTACTCCCTCCGTTTCATATTATAAGTCGTTTTGACTTTGGTCAAAGTCAAACTGCTTCAAGTTTGACCAAATTTACAGAAAATTAATAATAATATTTTCAACCCAAGACAAATATATTATAAAAATATATTCAATTATAGATTTAATAGAACTAATTATAGACTAATAAATTAGTCAAACTTACAACAGTTTGACTTTAACCAAAGTCAAAACGACTCATAATCTGAAACAGAGGGAGTAATTAATAAACTGCATGGTGATGAATAAGTTGTAATTTATTTATTTTGTTGTTCAGATAGAAGTGCTTAGCTGCATGAGGCATCCAAACATGGTGCTGCTGCTGGGAGCATGCCCGGAGTACGGGTGCCTGGTGTACGAGTACATGGACTACGGCAGCCTGGAGGACCGGCTGTGCCGGCGGGGGAAGACGCTGCCGATCCCCTGGAACATCCGGTTCCGCATCGCCGCCGACATCGCCACCGGCCTCCTCTTCCTCCACCAGGCGAAGCCCGAGCCGCTGGTCCACCGCGACCTGAAGCCGGCCAACATCCTCCTCGACCACAACTTCGTCAGCAAGATCAGCGACGTCGGCCTCGCCCGCCTCGTCCCGCAGTCCGCTGCCGCCGCCGAGGCCACGCAGTACCGGATGACCTCGACGGCGGGCACCTTCTGCTACATCGACCCAGAGTACCAGCAGACCGGGATGCTGACCACCATGTCCGACATCTACTCGCTGGGGATCCTGCTGCTGCAGATCATCACGGCGAGGTCGCCCATGGGGCTCACCCACCACGTCGAGAGCGCCATCGAGAGGGGGACCTTCCAGGAGGTGCTCGACCCGATGGTGACCGACTGGCCGGTGGAGGAGGCCTTGGTGTTCGCCAAGCTGGCGCTGCGGTGCGCCGAGCTGAGGAAGAAGGACCGGCCGGACCTCGGGAAGGAGATCTTGCCGGAGCTCAACCGGCTGCGCTGCCTCAGCCAGGAGTACGACGCCTCCAAGGTCAGCAGCACCAGCACCACCTGCTCCAGCTCCGCTCCCTACAGCTTCGGCGGCGACGACGTCTCCACGCCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006866