BGIOSGA006872

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Revision as of 02:47, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006872| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006872, complete gene.| tag = OS02G02...")
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Gene Name

BGIOSGA006872

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006872, complete gene.

LocusTag

OS02G0215000

Ensembl Transcript ID

BGIOSGA006872-TA

Ensembl Protein ID

BGIOSGA006872-PA

Length

6764

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:7417282..7424045

Sequence Coding Region

7424004..7424045,7423723..7423903),complement(7422897..7423009,7422660..7422764),complement(7422157..7422226
,7421638..7421693),complement(7420328..7420378,7419956..7420060),complement(7419807..7419851
,7419615..7419726),complement(7418919..7419121,7418309..7418395),complement(7417282..7417452

Genome Context

<gbrowseImage1> name=IndicaChromosome02:7417282..7424045 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:7417282..7424045 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTAATGCAAATCGTTACAATGGACCTATCCACAATGAGGTACCAGGTTTGGCATATCAACCACACTTAGAGCAACATTTAGGAGGTGGAAGGCAAACCCAAGCTCAGCATTCCATCAACAATGCTAAAATCAGTGTAATTAGTGCCTGTGACTTGTTCAAGCAGCCACTTCGTGGGTCACGGCCTGATCATATTGTTATCATCCTCCGTGGGCTGCCAGGTAGTGGAAAGAGCTATCTTGCAAAGGCATTGCGTGACCTTGAAGTTGAGAATGGTGGGAATGCACCTAGAATTCATTCGATGGATGACTATTTCATGATTGAGGTTGAGAAGAAAGTTGAAGACAACGAAGGATCAAAATCTTCTAGTACATCCAAAGGAAGAAAGCAGCTGACCAAGAAAGTGATCGAGTACTGTTATGAGCCTGAGATGGAGGAGACGTACAGATCAAGCATGTTGAACGCATTTAAGAAGACCCTTGATGAAGGGAATTTTACATTTGTGATTGTGGATGACCGCAATCTGCGGGTAGCTGATTTTGCTCAATTTTGGGCAAGTGCGAAGAAATCAGGCTATGAAGTGTACCTGCTGGAGGCACCATACAAGGATCCAACAGGCTGTGCTGCTAGGAATGTGCATGGGTTTACAGTAGATGATGTGAACAAGATGGCAGCAGACTGGGAAGAGGCTCCATCACTATATCTTCGACTAGACATCCATTCATTATTCAACGATGACAATCTACGCGAGCATTCCATTCAAGAGGTGGATATGGAGACAGAAGACACTGATGGGGCCAGTAACACAGCAACTAGTACTGAAGCTGAAAACACACAGAAGGCTGTGTCTGAATCACTAGATAATGGACATGATCAAGACATCTCAGAAGCAGGGAAGAAGTGGGACTCGTCAGAAGAAGACGACCTGGATGGCTACAAAGAGCTAGGACAGAGTAAATGGTCAAAAGATTTTGATGAGGATACCGAGAAGTCTGACCATGCAGAAGGAAGTACACATGCTCTTTCTGGATTGGCTCAAACCTACAGCACGCATCGAAAAACAGTTACCTGGGGAGATCGGCTAGAAAAGGGTGGTTTTTCTATTGGTGCAGCTAAAAGAAGACTCACTTCTTCATTAATCATAGGACCCGGATCAGGGTACAATTTGGTTTCCAACCCCTTGGCTGAAGATAATTCCAAGCAGGCAAAGGGGGTAATCAACACCGATACAAAGAAGCGATTCAGCGAACAACTTCGTGACGAAGGTGAATCCTTCAGGGCAGTTTTCGACAAGAGGAGGCAGCGCGTCGGAGTTTTTGGCAACGGAGATGGCGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MPNANRYNGPIHNEVPGLAYQPHLEQHLGGGRQTQAQHSINNAKISVISACDLFKQPLRGSRPDHIVIILRGLPGSGKSYLAKALRDLEVENGGNAPRIHSMDDYFMIEVEKKVEDNEGSKSSSTSKGRKQLTKKVIEYCYEPEMEETYRSSMLNAFKKTLDEGNFTFVIVDDRNLRVADFAQFWASAKKSGYEVYLLEAPYKDPTGCAARNVHGFTVDDVNKMAADWEEAPSLYLRLDIHSLFNDDNLREHSIQEVDMETEDTDGASNTATSTEAENTQKAVSESLDNGHDQDISEAGKKWDSSEEDDLDGYKELGQSKWSKDFDEDTEKSDHAEGSTHALSGLAQTYSTHRKTVTWGDRLEKGGFSIGAAKRRLTSSLIIGPGSGYNLVSNPLAEDNSKQAKGVINTDTKKRFSEQLRDEGESFRAVFDKRRQRVGVFGNGDGE</aaseq>

Gene Sequence

<dnaseqindica>1..42#143..323#1037..1149#1282..1386#1820..1889#2353..2408#3668..3718#3986..4090#4195..4239#4320..4431#4925..5127#5651..5737#6594..6764#ATGCCTAATGCAAATCGTTACAATGGACCTATCCACAATGAGGTTTATCTTCTTCTCTCTGTGAACTTGTGTTCACTGATTATGATTCAATACTTTCCTGGGCACTCAGAAAGCAGTACTTGTTGTTGTACGAATGTTTCAGGTACCAGGTTTGGCATATCAACCACACTTAGAGCAACATTTAGGAGGTGGAAGGCAAACCCAAGCTCAGCATTCCATCAACAATGCTAAAATCAGTGTAATTAGTGCCTGTGACTTGTTCAAGCAGCCACTTCGTGGGTCACGGCCTGATCATATTGTTATCATCCTCCGTGGGCTGCCAGGTTTTCTCACAACCGCTTTTATGTCCCATATGGCTGATTAAGCATTCCAAAGAACATTGCCGACACTGTTGACAGTTTTGTTGCTAGCCAGTGGCCACAGCGCTTGGTTAGACTAATTTTGTTAGACTATGCCTCAAAAAGCGTTCATCTTTTGTGTGGTAGCTTTACTGTACCTGTTGTTTGTTGAGATTGATCTGGCCTTCTCTGCATATAACACCTGGGAGTTGCTGATGTTTCTTTTATACTTATCAAATGCCTATTTTTTCAGTTCACAAAACAATACACATGATAAGCTCTTTTACTACTCTTCCATTCATAAATATATGTTGTTTCTAGAAATGCACACTGCTTCATCTGACTTCAATCATGATCTTAATAGAGGCATTTATATTGATCAAACTACTAAAATAACATCAATAATAAACCAATGGTTGAAATACTTTCATAGTGCTATTATTCTTGTAACATTTTACAAGCATATCATGGTAGACGATCAGAAACTTGTGGTCAAATTGGACCATGAAGATTGTAGACATTGTCTACTGTCAAGAGTGCTTGTAACATTTTTTTATCTGATTTTGATACATAACTTTTTTTCCTCTTATTGCACGCAAGCATTATGATCATGATTTAATAGTCTGCAAGACTGTCAATATTTTTTACTCTGGGAATTTATTCATATATATCTGTGTTACCGCTGTTACAATTTATAGGTAGTGGAAAGAGCTATCTTGCAAAGGCATTGCGTGACCTTGAAGTTGAGAATGGTGGGAATGCACCTAGAATTCATTCGATGGATGACTATTTCATGATTGAGGTTGAGAAGGTCAGTTGAAGAATAGCAGAACCTATCATGAACCCTGTACACTAATTTGTCACACTATACTCAGAATTGCTTATTACATTTCTGTTTTATTTGATGGGTATTCTGTCTTGTAACTTGGTTTAATGCTCTTAGAAAGTTGAAGACAACGAAGGATCAAAATCTTCTAGTACATCCAAAGGAAGAAAGCAGCTGACCAAGAAAGTGATCGAGTACTGTTATGAGCCTGAGATGGAGGAGGTGATGAAATAGTTTTTGTTTGACTTCATTCCTTTATCTCATTTATTATGAATGCTATTGCCAATTATTAGAGCTATGTTATGGCAAACTGTTTCATTTGCCTGAAAAATTAGTCTTTACTCATTAGAACTAATGTAAACCTTTAGAAATGTCACATTCCCCAGGTTTACTTTAAATAACAATATCAGAGCACATCGCCTAGAAGTTGCAGCACTGGGCATTTTGATGTTGAAAGGATGTGATCTCCCAGACTGCAGTATACTTCATAACCCACGTAGATGTGTTTCTGTTGTGGAATCTGTATACTGTACATGGGAGTATTTCCATCATTCACATTTTCGATAATTGCAGCATGAGTTATTGTTTTTTTCATGTATTTCACTATTTATCATTTGATGTAGTAATTTTGCTAAATTTCTTCTTTATTGGACAGACGTACAGATCAAGCATGTTGAACGCATTTAAGAAGACCCTTGATGAAGGGAATTTTACATTTGTGATTGGTATGAGTCATTTTAAATATTGTTGCTTTAGGATGAATTAATGATTTAATTCATGGTGGTGGTAATTACTTTGGTGGTTATGATTATGTTCTGCCTCATTATTTATCATAAATTTCATTGAGTACGGAAAAAGTCCTATGCAAACTTTATCATATATTCATTGACATCATATTATTTCAATCTATTGGCTTTTCTTCATGATTGGATCTTTGTCTTATTAAGTTCAATGTTTGGTGGTCATTTTCTGGGATTAGGACATAGGCAATGGGTTCCCTAGACATTGGGAGGATGACAGGACATCCATTTGTACTAGTGGTTTATGTTTTGTACTGTTTGAAACATTCAATTAAGCAACAGGCCTACAATGGCATTGTACCGGGTGATGCCTTCATTCTTAGCAATGGCTGATGCTGGATTTGTGGTAACTGACTTGTTTATTGCTGGTATCCCTGCCCGTTTTTAGTGGATGACCGCAATCTGCGGGTAGCTGATTTTGCTCAATTTTGGGCAAGTGCGAAGGTAAACTCTCAGTCTCTGTTGCGTCAACTGTGAGAATTTACATTGCTTGTTGGAGCTTTTTGTTAAGGTTTTGAATCCTCAAGAGGGGTTCTGCTTTTTCTCCCCTTAGAACAAGAGGTGGCCTGCACTTGAAAAGCATACTTTACTGCAAATTATAAGGCTGGAAAACACTCTTAACTTATCTTGGATACACTACGAATCTTCTATTTTCTCTTTCCTTTTTTATTAATGGTCTCTCAATACTACTCCCTCTGTTTCAAAATATAAGGTATATTTTTTTTGCCAGCACAAGACTTTGACCAACAATTACTCTATTAGGATATAATTTTTGTGACACGAAATTGAATTTGTTAGATTCGTATTCAAAAGCACTTAATTATGATTATGCTTCTGTATCACATAAATAATATCCTAATAGAGCAATTGTGGGTCACAGCCTTGTCCTAACGAAACAAAACACGCCTTATATTTTGAAAAGGAGGGAATATTATAGTTATCCTCCTAGCACCCCCTTGACATATATGTAGTGGATAGTATGAGAGGCATAGCATTAAGTAATTGTCATAAATTAATGCCCTGTTTGGAAACCATTTTTTTCTTTATTCCTGCTGGAATTGATAATTCCTACAAGAATTCGCGTCCCAAAGCCTTAATTAATAGCACTGTGCATTTATTACCGCTAAGACACTAAGGCAGTCCAGTTTATTGGACCCTTCTCTCCCTTCTTTGCTGCAATTGAATGTACCTATACACCAGAGGGGTTATTTGGTTGTTTCTTAGTGCAGACTTATCGCTAGCTGTATTTCTGGTTTCTGTATGCAATTAACTGCATATATGTGCTTTCTTTCAATATTACATGGTTTGCCCAATAATATAAACCTTTTGCTCATTTATTTTCAAGGGTTTTTGGTTTTCTGCTTGTTTTACATGCCCTGAATCAACTATCGAGTTGCTAAAATGAATTCGGTATTTGTGTATCCGTGTGGTTCTTGATGCTTCAGTTGGTCCAAAGCATCTTTGACTTCCACTTTAATGGCACTATTGACTTCTTAGAATTTAGATGATATGCCCATATGACAAGTGACCGTTTCATATGATTGTAACTTCTAATCTGTGCAAATTTTGTTGGATTATACCTTGCCATTTCAGGAGGCACTCTGTTCCTATACCTTCTTCTTTGGAATTTTATTCTCTGAATCATTTTATCTTGTTGGTAGTCATTTGAAAGTAAGTTCACTGTTCTTCTATTCCTTTTGTAGAAATCAGGCTATGAAGTGTACCTGCTGGAGGCACCATACAAGGATCCAACAGTAAGTTTTCTTAACTATAAGCTATCTAGGCAGTCCTGGGAAAATCATATTGAATTTATTTGATTCATATATGTATCAGGCTGTAAAAAATCTTGTTTGCATTCCCATTAGTTATATTACCAATATTTACACCATATATTATAAACATCTGAGAATGTATTTCAGTTCCAGTAAGTACATGGGTTTACAGTAGATGATGTGAACAAGATGGCAGCTAGGAATGTGCATGGGTTTACAGTAGATGATGTGATATCTTGTGAACAACAGGGCTGTGCTGCTAGGAATGTGCATGGGTTTACAGTAGATGATGTGAACAAGATGGCAGCAGACTGGGAAGAGGCTCCATCACTATATCTTCGACTAGACATCCATGTATGTTTTCTGATAGTATTCATATGATTGGCGGTTAAGACTTAAGACATGCTATTAGATACATGATTAATCGTGTTTTTCATGTTTTGTATTAATATTTTTAGTCATTATTCAACGATGACAATCTACGCGAGCATTCCATTCAAGAGGTATCCCATATCAGTATATCACTACCCTACCAGTCACTTAAAGAGATCTATGTGCTCAAAATCTATTGTACTTCAAATAGGTGGATATGGAGACAGAAGACACTGATGGGGCCAGTAACACAGCAACTAGTACTGAAGCTGAAAACACACAGAAGGCTGTGTCTGAATCACTAGATAATGGACATGATCAAGGTACAGATTCCTATTATTCTTCAGTGATTAGTGTTGGCATTCCTTTGCCACAATTTATTGTAACATTTAAACCTTCAAAACTATGAGGAAATACTGTAAGTTACTTTACACATAAATGTAGAAAGCCTTTTTCTTGTTCTGTTGTGTCAGTTAGTACTTATAATACAACCAAATACTTATTTGGCAATACTGATGAAATGTGGAGAGATCAAATCCCCTGCAAAACATGCACTGTGGGTTTGAAATAGATGGTTAAATAAGTGCAACAGACACCCTGCCATTGTGAATATCAATAATAGTAAACTTGTACTATTCACTGTACCCTGAATGTGGACCCACTGTTCTGATATTGTAGTGCATGCATCAGTAGTAGCAGACTGTTAGTTTGATTTGGAAGTTATCCTTAAGCATTAAAATTATAAGAAACACTATAACGGATTCTTAGTGAAAGTCTTAAGGACATGTTAAGTCAGACCTGTAAAATTCTGTTTAGACATCTCAGAAGCAGGGAAGAAGTGGGACTCGTCAGAAGAAGACGACCTGGATGGCTACAAAGAGCTAGGACAGAGTAAATGGTCAAAAGATTTTGATGAGGATACCGAGAAGTCTGACCATGCAGAAGGAAGTACACATGCTCTTTCTGGATTGGCTCAAACCTACAGCACGCATCGAAAAACAGTTACCTGGGGAGATCGGGTATGCCTTTTTGCTTCAAGGGAAAAAATGCATTGTTTTCTTGCATTTTGTTAATATCAAATGTTAGCGGCCTATATTTCTGTCATTGCAATAAACCAATCACTATTAAACAACTACCTTGTATTTCTAGGGAATTAAGGACAGATTAGTAGGATAGACAAATGACCACAATAACCTTATTTAATGAACACAATACATGCACACATTCCATATATAAACTTAATTAAAAGGAACGTTGAGAGTTGAAACAACAAGTTAGAGATGTGATGGAAGGAATGGAGATTACAAGGAAATATATTTTGATGTAATCAATTTGCTTGGTCCTGCATTAGTAGAAATACAATTTTTATGGGATGGAGTACATAACTAATCGTATTTGATTGCTCACTTAGTATTACAAACACATATTTGATGATACTTATAAAAAGAAGAGGACAAGTGATGCCCTTATTGTCCTTCTGCAACTTCTTATTGGTATTCATCATTTAACTAGCCTCCCATATTTTCTGTTCTTTCCTTGCAGCTAGAAAAGGGTGGTTTTTCTATTGGTGCAGCTAAAAGAAGACTCACTTCTTCATTAATCATAGGACCCGGATCAGGGTACAATTTGGTCAGTGGTCTAATTGACTTATTACTAAAGTTTGGTACTTTCGCAGTCTTTGATCTTTCTGCATGCCCTACGTAGTTTCATAACTTGATCCTCTATCCTTGTATCTCTTTGCCATCTTATCCTAGTTCTTGCAGAAAACGTGGGTCATAAGTCATTAATAATGGATCAGACAATGTTCTAAAAGGGTCTGCGATGTAGAGAAAACAATTATATGCTTTGATTTTAACACTTTTAACTTTAGAAATTTCTTCATCTGCATACTCAATAAAAAAATTACAATCATTCTCCAAGTGCTAATGTTATGAAAATTGATTCTTGTCAGTGCTTACAGTTGAGGGCTTGGGGCAGCACGTTGGCTCTTAAAAACTTGTAAGCATAGATGATGTAGTAGAGGCCTTTTTGTGCGCGGTGAAGCTGCTGTAGAAGTAGAACCCATGCTAGTAAATAACAAGGCTTAAGCAAATTCTTTTCGTCTACTGGGCACTGGCACTTGCTTATAGTGGGCACGCTTTTGAAACTGCTAAATGGTGTGATTTGTGCAAAAGTTTCTGTAAATAAATATATTTTTCAATTTTATAATATTTAATACTTACCTAAACATATCCTAATGACTTGTCTCGTTTTTTATGCCGCACAAGCCCTAACATCTAATTCGAACATAGCCTCAGACTCATCTTTCTTAGTTTGCAAGTTAGAAGATCCTCATGCTCATATTTGGTTAGGATTCTGAAAGGTTTATTAGATGGTTGTTTTTCCTGCTTTAGCCACATGGTACAGGAAGACCCATAGATAATGCATGCAGGAAGCCCCTCCCTTGACAGTAGGGCAGTTCAATTTATTTTCCCATTGCTTGCAGGTTTCCAACCCCTTGGCTGAAGATAATTCCAAGCAGGCAAAGGGGGTAATCAACACCGATACAAAGAAGCGATTCAGCGAACAACTTCGTGACGAAGGTGAATCCTTCAGGGCAGTTTTCGACAAGAGGAGGCAGCGCGTCGGAGTTTTTGGCAACGGAGATGGCGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006872