BGIOSGA006908

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Revision as of 02:47, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006908| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006908, complete gene.| tag = OSRPT6|...")
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Gene Name

BGIOSGA006908

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006908, complete gene.

LocusTag

OSRPT6

Ensembl Transcript ID

BGIOSGA006908-TA

Ensembl Protein ID

BGIOSGA006908-PA

Length

4227

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:6829155..6833381

Sequence Coding Region

6833165..6833381,6831921..6832018),complement(6831036..6831260,6830900..6830962),complement(6830657..6830820
,6830369..6830525),complement(6830186..6830284,6829988..6830098),complement(6829155..6829295

Genome Context

<gbrowseImage1> name=IndicaChromosome02:6829155..6833381 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:6829155..6833381 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACGGTGGCGATGGACATCTCCAAGCCCCCTCCCGCGGCGGGCGGCGACGAGGCTGCGGCGGCGAAGGGGAGGGGCGGCGCCGGAGGAGGAGGTGGGGAGGGGCTGCGGCAGTACTACCTGCAGCACATCCACGACCTGCAGCTCCAGATCCGGCAGAAGACGCACAACCTCAACCGCCTCGAGGCCCAGCGCAACGACCTCAACTCCCGAGTTAGAATGCTCAGGGAAGAGCTGCAGTTGCTTCAAGAACCTGGCTCGTATGTTGGTGAGGTGGTGAAGGTCATGGGTAAATCAAAGGTTCTAGTGAAGGTACATCCAGAAGGCAAATATGTGGTGGATATTGATAAAAGCATTGATATTACAAAGATCACACCTTCAACAAGAGTTGCTCTTCGAAATGATAGCTATATGCTTCATTTGATCCTGCCAAGCAAAGTTGATCCTTTGGTCAATCTTATGAAAGTTGAGAAGGTTCCTGATTCTACTTATGATATGATTGGAGGTCTTGATCAGCAAATCAAAGAGATCAAAGAGGTCATTGAACTTCCTATCAAACATCCAGAGCTATTTGAGAGTCTTGGAATTGCCCAACCAAAGGGTGTCCTTCTCTATGGCCCTCCAGGCACAGGAAAAACATTGTTGGCACGTGCAGTTGCTCATCACACTGACTGCACCTTCATCAGGGTGTCTGGTTCCGAGTTAGTTCAGAAGTACATTGGTGAGGGTTCTCGGATGGTCCGTGAACTCTTTGTTATGGCCAGGGAACATGCACCATCCATTATTTTCATGGATGAAATAGACTCCATTGGATCTGCTAGGATGGAGTCTGGAACTGGCAACGGTGACAGTGAAGTCCAGCGAACCATGCTTGAGCTTCTGAACCAACTTGATGGTTTTGAAGCATCAAACAAAATAAAGGTTCTGATGGCAACAAATAGGATAGACATCTTGGATCAGGCCCTTCTGAGGCCTGGTCGCATAGACAGGAAAATTGAATTTCCTAATCCTAATGAGGATTCACGCTTTGATATCTTGAAGATTCATTCAAGAAAAATGAACTTGATGCGTGGTATTGATCTGAAAAAGATCGCTGAAAAGATGAATGGGGCTTCAGGAGCCGAGCTCAAGGCGGTCTGCACAGAAGCTGGAATGTTTGCTCTTCGTGAGAGAAGGGTGCATGTAACACAAGAGGACTTTGAGATGGCAGTGGCGAAGGTGATGAAGAAAGACACGGAAAAGAACATGTCCCTACGGAAGCTCTGGAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MATVAMDISKPPPAAGGDEAAAAKGRGGAGGGGGEGLRQYYLQHIHDLQLQIRQKTHNLNRLEAQRNDLNSRVRMLREELQLLQEPGSYVGEVVKVMGKSKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYMLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGTGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKDTEKNMSLRKLWK</aaseq>

Gene Sequence

<dnaseqindica>1..217#1364..1461#2122..2346#2420..2482#2562..2725#2857..3013#3098..3196#3284..3394#4087..4227#ATGGCCACGGTGGCGATGGACATCTCCAAGCCCCCTCCCGCGGCGGGCGGCGACGAGGCTGCGGCGGCGAAGGGGAGGGGCGGCGCCGGAGGAGGAGGTGGGGAGGGGCTGCGGCAGTACTACCTGCAGCACATCCACGACCTGCAGCTCCAGATCCGGCAGAAGACGCACAACCTCAACCGCCTCGAGGCCCAGCGCAACGACCTCAACTCCCGAGGTGACGTAACCCTAGCTGTATCACCGTGTGGGTGCGATGCTGTCCGCGGCTTGATGTGGCCGAATTGGATCGGCGCGTGCGTTGGTGGAAAACCTAGGTTTACTCCGTGGGTGTGTGTGCGGATCGTAGCCAAAGGCGCGATCTTTAGTTGCGATGTTTGGGCAAGAACTCTCGGGGCCAAACCCGTTAGGCAATTAGGGAACCCTAGCGTACTTGTATGACACGCATTTGTAGCCACAGGCATGATTTTTTTTAGTTAGTTGAGCTGCTGGTTGGCCATATGCTGATCTTTAGAACTTCCGTCAAATTTTGGTGGCCCCCATTTTGATCAATTATGTAGTATTTTGCAGGATATTTTTTCTTGATTTGCATTAGATGTAGCTATTATCTGCTTTAGTTGTGCATCTCTAGATCAGTTAGTTTATGTGCGCTTGGATGCCAAATCTAGTTGCGCTATAGTTGGCCATTTGCTTATCTTGACAACTTTTTGTCAGATTTCGATTGTTCCCTTTTCCTCCATTGTCTAGTATTTTACAGGATAGTTGATTTTGCATCAAATGGAGCCATCTGCTTTAGTCGTGTATTGATGTTTAAACGGCAGACTGTCTATTGCCGTAGTCAGTTTGAGTTGGAAACTATATACATGCGATAGTTTTGTTTAGCTGCGCTTGGGCACCACTTAGGCAGCAAATTTGAACATCGTCAGTTTCTTGATTGCATTGAATGTCTATTGCCTACTGGTATACACCGATGTTCTCGAGTTGTGAGTAAATAAACTGCAGTTCTGCCTTTCAAGCATTTCTTTTATTTGGTTGCAAAAATGTTCTTAGTTTTTCAGAAATTGTTCCATGTTGCCTTTCAGATGAGGATTTTGTGTTACTTTTAACTTTCTAATGCATCGTTTCATATTGAGAATCCGAAACTGAACTCCCTCTATACGAACATGATTAAGTGGGGTTCCTGTACTCCTTATTTTCCATTTCAGTGTGATTTCTAGCAATATAGAACTATACCTATATTAGGAATCTCTGTAAAGTGTGAATATTCTATCCTTGATTTGTGGAGTTCTACTTGATGCATGTGAAATGTTATCTTTTTCTTCTTTACTATTTCCCTCTAAATATGTTGTGCAATTTCATCTTGCAGTTAGAATGCTCAGGGAAGAGCTGCAGTTGCTTCAAGAACCTGGCTCGTATGTTGGTGAGGTGGTGAAGGTCATGGGTAAATCAAAGGTTCTAGTGAAGGTACATTCTCTTTATTCTTTTACATGATCTTTTCTATGATCAATACTTTAGGTGTGCCAATTTTATTACTTGTCCATGGACTTATTACTTAATTTTGATTGGTTGAAGCATCAAACCTAGCATTTGATCCATCTCTTGTGGTTGTCTATCATTCACTCTCTGTTGTAAATTTTTCCATGTGCTGTGACAATAACAATCTTCTAGTTCACCATACATAGTCAACTTTGCTTAACTACCTTATTAATCCTGATTGACTTCAGCTTGTCATATTTAATAGCCCATAAATGAGCATTATTTCTGCTCTTATAGACAACTCTGCAGTTATGCATAAAAAGGGTGATCCAGAACTCACAGAACTCCATACATGAAACTCATGTTATTACTCTGGCAAGCCCATAAGTGCTTCTGAATCTCAAGTACTCCTATCTTGTTATTGTAAAAATGTGAATGCTTAGGCCTATGGCTGTGACTATATGTGGAAGTGCAAATTTCTTGGTTTCTTGTTTGGCTTTTTAGATTTATTTATTAATAGCTTGATGTGACTGTATTGACATGCTCACGATCTGTCACATTGTCATTTGGTTCTGTTAGCCCTTTTTGTAATGGAAATCCTAAATTTCTGTTTACCAGTGCTATTAACTTCTCAGTATAATTATTCAGGTACATCCAGAAGGCAAATATGTGGTGGATATTGATAAAAGCATTGATATTACAAAGATCACACCTTCAACAAGAGTTGCTCTTCGAAATGATAGCTATATGCTTCATTTGATCCTGCCAAGCAAAGTTGATCCTTTGGTCAATCTTATGAAAGTTGAGAAGGTTCCTGATTCTACTTATGATATGATTGGAGGTCTTGATCAGCAAATCAAAGAGATCAAAGAGGTTTGTATATAATTTCAATGTACTATTGATGCATCGCATATAGCACATTCTAACTCATGAACTCAACTTTTAGGTCATTGAACTTCCTATCAAACATCCAGAGCTATTTGAGAGTCTTGGAATTGCCCAACCAAAGGTTTGAACTTCTTAACAATATCATCTTAAACGATCCTATTTTTAAGTATTAGCAGAAAATATTAACTCTCTTTTTTCAGGGTGTCCTTCTCTATGGCCCTCCAGGCACAGGAAAAACATTGTTGGCACGTGCAGTTGCTCATCACACTGACTGCACCTTCATCAGGGTGTCTGGTTCCGAGTTAGTTCAGAAGTACATTGGTGAGGGTTCTCGGATGGTCCGTGAACTCTTTGTTATGGCCAGGTAAACTGAGCAAAAATACCCTGAGTTCTTCTATTATAGTGAAAGCATTATTGGCTTGCAATCTGAACTATAGTTCTACATATGCACTCTGTTGTCAGTGTAGGCTTAATTGTTTGGTTAACATATTACAGGGAACATGCACCATCCATTATTTTCATGGATGAAATAGACTCCATTGGATCTGCTAGGATGGAGTCTGGAACTGGCAACGGTGACAGTGAAGTCCAGCGAACCATGCTTGAGCTTCTGAACCAACTTGATGGTTTTGAAGCATCAAACAAAATAAAGGTGTGCCACTGCTTTGCATATGTTATATGTGCCGATTAATAACCGTGAAGGAGTTTATTGTGACACGTTAAATGTTCCATGCAGGTTCTGATGGCAACAAATAGGATAGACATCTTGGATCAGGCCCTTCTGAGGCCTGGTCGCATAGACAGGAAAATTGAATTTCCTAATCCTAATGAGGATGTAAGTGCTGATAACTTACTGTATATTGTTTGTGTTAATTTTTCCATGATTTCTTGTGTTGATGATGCGCTTATCTTTTGCTTTCAGTCACGCTTTGATATCTTGAAGATTCATTCAAGAAAAATGAACTTGATGCGTGGTATTGATCTGAAAAAGATCGCTGAAAAGATGAATGGGGCTTCAGGAGCCGAGCTCAAGGTTTGTTTAGTCTTTACTTTCATCTGTTATAAAACATTGTACTGTGTATTTGTCTCACACGAGTGATTATTGCGAGATTAGTTTAAATCCCTCCGCTACTTCCGTTTGTCATGCGCCATGCGCGGGCTACCGAACCAACACTGTGACATTGCCACTTTGATCGATGCTATTGCTACATGATTTATTTGTCCCTTGGTATCGCTGCACATGCCTAATATGATGATCAATTGTGAATGGAGGGAGCATTGAAAAATTATTATTGTGCTTACATAGAAGGCTCCTGACGAGACTTTTCTATTACCCCTAAGTGCATCTATACATGTTTCCCGTTCCATTTTTTTCTCTTGTAGTTCAAGTTTCCGTTAAGATGTCCAAGGATTAACAAGGTTCATTGACTCTGGATTTAATTGAGCTAACGTGGTGATGTATTGTGGCAGCAACACCGAAGTTCGAATTACATTGTGCTGGTCTAACGCTACCAGTAGTGTCATGACATCAAAATGTTTAACTAGTGTCTCTGGAAAATTGAGCAGAATCTTCTATGCAGAATTTCACTGCATGTGCACTTATGAAGAGTTCCATTTAATTTAGTTTCAAAACAATGTGCATATATACACAGCACTATAGAACGTCATAGCTCCTATACCTTGTGATCATGCAACTTTATTCACTTTCTCTTTCATCATCTTCAGGCGGTCTGCACAGAAGCTGGAATGTTTGCTCTTCGTGAGAGAAGGGTGCATGTAACACAAGAGGACTTTGAGATGGCAGTGGCGAAGGTGATGAAGAAAGACACGGAAAAGAACATGTCCCTACGGAAGCTCTGGAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006908