BGIOSGA006932

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Revision as of 02:48, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006932| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006932, complete gene.| tag = OSRPT4|...")
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Gene Name

BGIOSGA006932

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006932, complete gene.

LocusTag

OSRPT4

Ensembl Transcript ID

BGIOSGA006932-TA

Ensembl Protein ID

BGIOSGA006932-PA

Length

4959

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:6476466..6481424

Sequence Coding Region

6481319..6481424,6479135..6479254),complement(6478741..6478877,6478447..6478608),complement(6478236..6478322
,6478068..6478154),complement(6477645..6477782,6476789..6476980),complement(6476626..6476724
,6476466..6476540

Genome Context

<gbrowseImage1> name=IndicaChromosome02:6476466..6481424 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:6476466..6481424 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGACGGGGAGGACGCCGCCGCCGCCCGCCGCCGCGCCGCCGTGACGGAGTACCGGAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCAGCACCGTGAGGGAAAACCTAAAAAATGCTAAGAAGGACTTTACAAAGACCGAAGATGACTTAAAATCCCTGCAAAGTGTTGGGCAGATCATCGGAGAGGTTCTCCGCCCTCTTGATAATGAACGTTTTATTGTTAAGGCTAGCAGTGGTCCCAGATATGTGGTTGGTTGCCGGAGCAAAGTGGACAAGGAGAAATTGACTTCGGGAACTCGTGTTGTTCTTGACATGACAACACTGACAATCATGCGCACGCTTCCACGTGAGGTGGACCCTGTGGTTTACAACATGCTTCATGAAGACCCCGGTAATGTCAGTTACTCTGCTGTTGGTGGTCTGTCTGATCAGATTAGAGAGCTCAGGGAGTCCATCGAATTGCCCTTAATGAACCCTGAGCTCTTTCTTCGTGTTGGGATCAAGCCCCCCAAGGGTGTTCTACTCTATGGTCCACCAGGAACTGGTAAGACACTATTGGCGAGGGCTATTGCCAGTAACATCGATGCCAACTTTTTGAAGATTGTTTCAAGTGCTATAATTGACAAGTACATTGGAGAGAGTGCCCGCTTGATTAGGGAAATGTTTGGCTATGCACGTGATCATCAACCATGCATAATCTTCATGGACGAAATCGATGCCATTGGTGGGCGGCGGTTCAGTGAAGGAACTAGTGCTGATCGCGAGATCCAGCGCACACTGATGGAACTGCTAAATCAGTTAGATGGATTTGATGAACTTGGAAAGGTGAAAATGATCATGGCTACCAATAGACCTGATGTTCTGGACCCTGCGCTACTGCGTCCTGGACGTCTAGACAGGAAGATTGAGATTCCGCTACCAAATGAGCAAGCAAGAATGGAAGTTCTTAAAATCCATGCTGCTGGTATTGCCAAGCATGGAGAAATTGATTATGAGGCAGTTGTTAAACTGGCTGAGGGCTTCAATGGGGCTGATCTTCGCAACGTCTGCACTGAAGCGGGTATGGCTGCAATTCGTGCTGAACGGGACTACGTTGTCCATGAGGACTTCATGAAGGCTGTCAGGAAGCTGAACGACGCCAAGAAGCTGGAATCCAGCGCCCACTACAGTGCAGACTTCGGCAAAGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MADGEDAAAARRRAAVTEYRKKLLNCRELESRVSTVRENLKNAKKDFTKTEDDLKSLQSVGQIIGEVLRPLDNERFIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQARMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVVHEDFMKAVRKLNDAKKLESSAHYSADFGKE</aaseq>

Gene Sequence

<dnaseqindica>1..106#2171..2290#2548..2684#2817..2978#3103..3189#3271..3357#3643..3780#4445..4636#4701..4799#4885..4959#ATGGCCGACGGGGAGGACGCCGCCGCCGCCCGCCGCCGCGCCGCCGTGACGGAGTACCGGAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCAGCACCGGTGAGCCGCCCGCTCCCCACCCCTCTACTTCCCCCCTGCTTGACTTCCGATCTCCCTAGGGTTCGGAGGCGATGGGTTCCGATGTTACCCTAGCCGCCGCGTGGCCTGCGCGCGCGGTAGATCTCGTCCGCGTCTGCGGATGACTTGGATGAAGAGTGGCTCGTGTGTAGATTCGGTCGGCAGGGTGGCTTAGTACTGGTGATTTCGGGGATTTACTAGGGGAATCACTTGTTCCGCGACGTGTTCGGGGTGCTAGATCGCGGTCTGGGGCGCTGGGCGTTGGGTTACGAGGTTGATTAGGTCGGTTTGGTCTTTCGAGCGCTAAATCTGATGATTTGGGCACTTTTTGCTCGATTTGGATCTGAAGTCTGTAGTGTGATTAGACTTAGGATTTTTGTATTAGTCAACCCTGACCATTTGGGTGAGTGATAACCAACCTCTCATAAATTCGGGATCAAGGAGGAGTATTTCCTGATCCTTCAGTAGTTTTTCTTCCTTTTCAACTGTTTGATTATGGAGGTGCTAGCTCCTCTTAGTGCGTCATTTAGGTCTCTAATTATGGTTTGAACTTTAAATTGCTTCCTGTGAGAATGTCTAAAGAATTTATTTAACTTGTTTGAGATTTTGGTACTGTGGGGGTGCGATTTTCATGGAACTCAAGCATTATCTGCTTCTTCAACAGTAGTTTCCATGCTTCAAGTAGGCTGCAGCACTCTAGCCTGTGGTGGTCATTAGTCTCTTAGAGCAGCCACATTGTTTAAAACGTGGATTGATTATTCTAGTTAAGTGAGAGCTGTATAGTACACCATAGGTGTCTATATCTAGACCTATTTAAGCCTGAATCAATATACTAGTATCCTTGAGAACTCTTTCATATATACTATGCTTCTGGTGGACTGTAGTTTCATAGGTTATACTTTTGCTGCTGGCAGTCAATGAGTTAAGGCTTAGGTACAATGCTCGTAATCTTTAGTCATGGGATTATGGCTCATCCCAGTTAATGTCAACTAACAAATGGGCTTTGTGATGCATATACTCATTACCACGTGTAGTTTGAGGAAAAAATGTGGCAACCAGGGTTATATGGCTTAGAGCAAGTCTTATAGAAGAGGTAGATGCCACCTCTGTCCATGTAGGCTATTCATTAATGAAGAGGTGGCATGTACAATATATCACCTCTATATACTAACTCTAGTGCACTAACCCTAATAATTTTGTTTTATTTGTTCGTCCATCTACTCTTCTCTTTTCTCTCCTTTCTCTTGGAGTTTGTGTGGAGGCTACCCCTTGCATGAGTGGTGGCTCCTCCTCTCTCTCTTCTTGTCTCTTCTCTCCTCCACCTCATCATATGATGCTATGTGGCATCTTGTGGCAAGTGATCCTATGTGGATCTTGGGGCAAGTGTTTAGGGGCTTATAGTACTTGCTCTTGGCAATACTCAGCCTGGAGGGACCCATGCGATGATAGCAGTCATTTATCTGCTTTGATAATTTTGTATTATACTAGGATATTCAGCCAAATTTCCTTCCAAGGAAGTAGCGTTATTTGTGGAGTCAAAACACATTCCTCTTTAGTTTAATGATCGTGAAAACACACTTCAGCTGCATGAAATCGTGGCTTGTTATTGTTAGTAAAGTAGCAACTGTTAGCTATTGTAGGATTGTGCATCATTTCTTTCCCATATTTTTTTTGTTTGGTTTAGTTGTAACAGCTTGTTTGTTCACATGCCAACCTTTGGTTTCTTCTCTTTTAGTCTTATACTCCCTGTTATTATAGATAAACAACAGGAGGAGAAGATTAGTTTTTTAACTATGGGATGATTCCCATACTGAAGTTTCTTTGCATCCATAAACTTTGCTACTATAGTTCATTTGGAACTCAAGTCAAACCTTTTTCTTGGGCAACTGAACAACATCTAGTCATGTCTTTGCCGTTTTGTTTTGTTTTTTGGGAACAATACAAGTAAATTTAAAACACATGTTTGCTTGCTTTTAGAACTTTTTGGAGCCTGTTTCATTTTTATTTGCTTGATCTTGCTTTGATGCATGGTTCATCTATATGCAGTGAGGGAAAACCTAAAAAATGCTAAGAAGGACTTTACAAAGACCGAAGATGACTTAAAATCCCTGCAAAGTGTTGGGCAGATCATCGGAGAGGTTCTCCGCCCTCTTGATAATGAACGTTGTAAGTAAAGAGCATTTCCTTTTTGTGTTGAATTTACATCCTTTACTTTGGCCACTCCTTATCACTACAGAAAAATCACAAGTATTTGCTTTTGCCATTTCTTTCCTTCAATGATGGAAAATGACTACAATACTGTTAATTAACTTGATAGAGTTATTACTTATAGCATTTTTATATGAAGCTATTGCTTGCATTTTAGATTTTTTTTTATCAACAGAATTTTAGAACTAAACAACTGAAACGCCTATTTCTTCAAGTTATTGTTAAGGCTAGCAGTGGTCCCAGATATGTGGTTGGTTGCCGGAGCAAAGTGGACAAGGAGAAATTGACTTCGGGAACTCGTGTTGTTCTTGACATGACAACACTGACAATCATGCGCACGCTTCCACGTGAGGTATATTTAGTTTTTAAAAATCATCTTCCTTTTTCATTGGAGCATTTTTGTCGAACCTTTTACTGTAGGAGCAATTTTTTTAAACAAAAATCGATGATCTGGGATTTAAAACTGCTTTTTTCCCCCCTTCAGGTGGACCCTGTGGTTTACAACATGCTTCATGAAGACCCCGGTAATGTCAGTTACTCTGCTGTTGGTGGTCTGTCTGATCAGATTAGAGAGCTCAGGGAGTCCATCGAATTGCCCTTAATGAACCCTGAGCTCTTTCTTCGTGTTGGGATCAAGCCCCCCAAGGTAAATCCTACATTATTTGTACTTAGATCCCTAATAGTGCATGTAATGTGACTATGAGATCACAGAGACATATATATGGATATTGCAACCATGGAAGTTATTATATTTTACTTACTCATTGCAGGGTGTTCTACTCTATGGTCCACCAGGAACTGGTAAGACACTATTGGCGAGGGCTATTGCCAGTAACATCGATGCCAACTTTTTGAAGGTGTGTCGTTTGCTCACTTAATAGGTAGTAGCCATCTTTTACAAACTAATTATTCTTTGTACTGATAATTTGGCTAAACAGATTGTTTCAAGTGCTATAATTGACAAGTACATTGGAGAGAGTGCCCGCTTGATTAGGGAAATGTTTGGCTATGCACGTGATCATCAAGTAAGTCTTAATCTCTCTCTACTTTTTTCTGGAAAGCTAGTTGGACCTAAATTGGCATCCTCATTTCTGCAAGACCTACTCTGACATTTACATGATCTAACCATAATCATATCCACATTGTGGAAGTTATTGTTGGTTCTAAAGTTAAAACAATCCTTACGCTATAATCTTCCTTTACATTTAAGTTGCTATGTGGACACTAGCGGTGCATTTCTCCAATCACTTTAACTCACATTCATTTAGTTTCCATCACTCAGTTTTGCCTCCCAAATTTTCTTTACCTAGCCATGCATAATCTTCATGGACGAAATCGATGCCATTGGTGGGCGGCGGTTCAGTGAAGGAACTAGTGCTGATCGCGAGATCCAGCGCACACTGATGGAACTGCTAAATCAGTTAGATGGATTTGATGAACTTGGAAAGGTAACTTATTCATCAGACATATAATTTGGCTATACTGCATTTTATTTTGGTATCATACTGCAGTATGTAAATGCAAGTGAGTTTGATTAAAGTAGTTTACTTGCTAGCATGTTTGCATGTCTACATTCTGGTCTAGCTTTCTTGGGTAAAAGTACACTGATGAGGGAAAATATATTCTAATTTACCTTTCTTTTAACAACCTCCATTGTACAAGATTAGCTGATCTGTACAGTGTAGTATTAAGCAAAGGTATGCATACCTTAAGATCAGTCCTTGGTGGAATCCTGAAAATCATACCATTGACATGATGATTCGTTTATAATCCCTGTTGTAGTATTGTGAGTTGTGGCATGTTGGTGGCTTGACCTTTTGCCAATTATTCCCACTGGCAACAAATATTAGAATCTAGATTTATGATGAAATGACTTTTGGCTCTTCCAATTGATTGAATTGATCATCTTACCAATCTAGGTTTTTTGACTGCTCAATTGTCCATCTATGTCTATGTTCCTAGTTTGTTCAGAATCAAATTGGGTGTGTTCAGAATCAAATTGGAGATACAGTTGGTTACTCTTGTTTGTATGGTTTTTTTGGTACCATGTACAATGATTGCTGCTTGATGATGCATGATTTCATCTTGACAAGAACTTTTTTGCTTAAACAGGTGAAAATGATCATGGCTACCAATAGACCTGATGTTCTGGACCCTGCGCTACTGCGTCCTGGACGTCTAGACAGGAAGATTGAGATTCCGCTACCAAATGAGCAAGCAAGAATGGAAGTTCTTAAAATCCATGCTGCTGGTATTGCCAAGCATGGAGAAATTGATTATGAGGCAGTTGTTAAACTGGCTGAGGTGAGTTTGTCTTATTTAACTTCCTTATCAACTTGGGCAACCTTCCTGACTCTGGTGGTTTTAGGGCTTCAATGGGGCTGATCTTCGCAACGTCTGCACTGAAGCGGGTATGGCTGCAATTCGTGCTGAACGGGACTACGTTGTCCATGAGGACTTCATGAAGGTGCGCCGCATTATACTGTCTTCTATCTACCAACACACCAGCTGTTAGACATTATCTCACAGTTTACATGCGAATTGTACTTCAGGCTGTCAGGAAGCTGAACGACGCCAAGAAGCTGGAATCCAGCGCCCACTACAGTGCAGACTTCGGCAAAGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006932

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA006932&oldid=60484"