BGIOSGA006974

From RiceWiki
Revision as of 02:48, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006974| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006974, complete gene.| tag = OS02G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006974

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006974, complete gene.

LocusTag

OS02G0191700

Ensembl Transcript ID

BGIOSGA006974-TA

Ensembl Protein ID

BGIOSGA006974-PA

Length

3444

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:5925135..5928578

Sequence Coding Region

5928159..5928578,5927921..5928026),complement(5927483..5927582,5927285..5927390),complement(5926955..5927045
,5926722..5926863),complement(5926450..5926597,5926256..5926365),complement(5925593..5925749
,5925381..5925506),complement(5925135..5925275

Genome Context

<gbrowseImage1> name=IndicaChromosome02:5925135..5928578 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:5925135..5928578 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCGGCGGATCTGAGCGCCGCGGCGGAGGCGCTGGCGCTGCAGGTGGACCTGCTGCAGCTGCCGCCTGAGATCCCGGCGCCCGGGGCGCCCGCGCTGAGCGTGGTGCTCGACCGGCTGTTCGCGCACTGGCTGACCCTCCCGGACACCGTCGCGCTGGTCGGGTGCCTGGTGCAGAAGGCGAAGGCGAGCGGCGGGGGCGGGGGCGGCGGCGCGGCGGGCGCCGCCGTCGGCCCCGGGTCCGCGATGCTGCCGTCGATGATGATGCAGGGGGGCGCCGCGGTGCCGCCGCTCTCGCCGAGGTCGCCGCGGCTCTCCAGGAGGCCCAGCGGCGTGGGCACCGGCGGCCAGTCCAACCGCTCCGCCTCCCCGCTCCGGCCGGCCACCGCCCGCGCCGTCAAGGAAGTCATACCCCAGTTCTACTTTCAAGATGGGCGCCCACCCACATACGAGCTGAAGAAGCAATGCATAGCGATTGTTGATCAGCTCTTCGCTGGACACTCCAATGGTCTCCGGATTCAAGAGTTTCGGCTGGTCACTAGGGAACTCTGCAAACTGCCATCATTCTTTACCACTGTTCTTTTTGGGAAGATTGATAAGGAAAACACAGGATTTGTCACAAGGGATGCCTTCATCGATTTCTGGTTAAATAGCAATATGGTGACTATGGACGTTGCAACCCAAGTATTCATAATCTTAAAGCAAAAGAATCAAGATTTTCTCACAAAGGAGGATTTCAAACCAGTTCTTCGAGACCTTCTGGATAACCATCCTGGTCTGGAGTTCCTAAAGAGCACACCTGAATTTCAAGAAAGATATGCTGAGACTGTCGTATATAGGATATTTTATTGCTTGAGTCGAATTGGAGGTGGCCATCTTACACTTAGGGAGCTAAAGCGTGGAAATCTGATTGATGGGCTGCGACATGCGGATGATGAAGAGGATATTAATAAAGTTTTAAAGTATTTCTCATATGAGCATTTTTATGTGATATATTGCAAGTTCTGGGAGCTGGACACAGACCATGATTTCTTCATTGATAAAGAAAATCTTATTAAGTATGGAAATCATGCATTGACATATAGGATTGTAGATAGAATTTTCTCAGAGGTTCCTAGGAAATTTACTAGCAAGGTTGAAGGGAAGATGGGATATGAAGATTTTGTTCATTTCATATTATCTGAAGAGGATAAGTCATCAGAACCAAGCCAGGAATATTGGTTCAGATGTATAGATGTGGATGGCAATGGCATTCTCACACATAATGAACTACAGTTCTTTTTTGAGGAGCAACTTCATCGCATGGAATGCATGGCCCAGGAACCTGTACTGTTTGAAGACATCTTGTGTCAACTAATTGATATGATTGGACCTGAGAATGAGACCTTTTTTACATTAAAAGACTTCCGAAGGTGCAAACTGTCTGGGCATTTCTTCAACATTCTCTTCAACCTGAACAAATTTATGGCCTTTGAAGCTAGAGATCCCTTCCTCATCCGCCAAATGCGTGAAGAGCCATCATTGACAGACTGGGATCGTTTTGCTCGGAGAGAGTATATAAGATTGGCCATGGAAGAAGATGGTGAAGATGCTTCAAACGCAAGTGGAGATGTTTGGGATGAGTCACTTGAATCTCCTTTCTAA</cdnaseq>

Protein Sequence

<aaseq>MEAADLSAAAEALALQVDLLQLPPEIPAPGAPALSVVLDRLFAHWLTLPDTVALVGCLVQKAKASGGGGGGGAAGAAVGPGSAMLPSMMMQGGAAVPPLSPRSPRLSRRPSGVGTGGQSNRSASPLRPATARAVKEVIPQFYFQDGRPPTYELKKQCIAIVDQLFAGHSNGLRIQEFRLVTRELCKLPSFFTTVLFGKIDKENTGFVTRDAFIDFWLNSNMVTMDVATQVFIILKQKNQDFLTKEDFKPVLRDLLDNHPGLEFLKSTPEFQERYAETVVYRIFYCLSRIGGGHLTLRELKRGNLIDGLRHADDEEDINKVLKYFSYEHFYVIYCKFWELDTDHDFFIDKENLIKYGNHALTYRIVDRIFSEVPRKFTSKVEGKMGYEDFVHFILSEEDKSSEPSQEYWFRCIDVDGNGILTHNELQFFFEEQLHRMECMAQEPVLFEDILCQLIDMIGPENETFFTLKDFRRCKLSGHFFNILFNLNKFMAFEARDPFLIRQMREEPSLTDWDRFARREYIRLAMEEDGEDASNASGDVWDESLESPF</aaseq>

Gene Sequence

<dnaseqindica>1..420#553..658#997..1096#1189..1294#1534..1624#1716..1857#1982..2129#2214..2323#2830..2986#3073..3198#3304..3444#ATGGAGGCGGCGGATCTGAGCGCCGCGGCGGAGGCGCTGGCGCTGCAGGTGGACCTGCTGCAGCTGCCGCCTGAGATCCCGGCGCCCGGGGCGCCCGCGCTGAGCGTGGTGCTCGACCGGCTGTTCGCGCACTGGCTGACCCTCCCGGACACCGTCGCGCTGGTCGGGTGCCTGGTGCAGAAGGCGAAGGCGAGCGGCGGGGGCGGGGGCGGCGGCGCGGCGGGCGCCGCCGTCGGCCCCGGGTCCGCGATGCTGCCGTCGATGATGATGCAGGGGGGCGCCGCGGTGCCGCCGCTCTCGCCGAGGTCGCCGCGGCTCTCCAGGAGGCCCAGCGGCGTGGGCACCGGCGGCCAGTCCAACCGCTCCGCCTCCCCGCTCCGGCCGGCCACCGCCCGCGCCGTCAAGGAAGTCATACCCCAGGTACGCGTCCTCGATCCCCATCGATCAAATCCACGCAACAATCTCTCGCCGATGGAATCGCCATTGCCGTTGTTGAAATGAGCCAATTCTAATTATTTCAAAATAAATGTTAATGTTGATTTTGATTGGCAGTTCTACTTTCAAGATGGGCGCCCACCCACATACGAGCTGAAGAAGCAATGCATAGCGATTGTTGATCAGCTCTTCGCTGGACACTCCAATGGTCTCCGGATTCAAGGTCTGCTCCAAATCCAATCTGAGACATTCTTTTCGTTCTAGCCTTGATTCTTTTCGTTCTAACAATGGATTGATTCTTGGAATTGATCATAATTAAATAATTTAATGGTGTCTGGATGCTGGAGCTAGCATATCCTGATTTAGTCATTGGGTGTTTTCATCCGACCGTATTCGCTTTCATTTTCATAACATGTTCTGTTAATTATTTGTGATGTTGTATAGTCTTGTAGAAGACAAAAAAATGAATTTGTGCCAAGATGTCAACTATCTTGATCAGATCAGTTTGTGAGTGATGCTGTCAACTAATATTCTTTTCTGTCTCCTTTTGTTCTATAATAGAGTTTCGGCTGGTCACTAGGGAACTCTGCAAACTGCCATCATTCTTTACCACTGTTCTTTTTGGGAAGATTGATAAGGAAAACACAGGATTTGTCACAAGGTAGTTGACTACTTGGCTACTTGCACTAGTTTGCAGGGTGCAAAAAAAAAAAAAAATCTGGTTAAATCCTGTTTTATGTTATTTGTTTTCAGGGATGCCTTCATCGATTTCTGGTTAAATAGCAATATGGTGACTATGGACGTTGCAACCCAAGTATTCATAATCTTAAAGCAAAAGAATCAAGATTTTCTCACAAAGGTATGCCTCATTCATCAAAATATAGGTCTATGGTAAAATATTTCAGAGATGGATTAATTCAGGAAATCAAGGTGTGGGCTTATACACCCCACTGCCTAGGTTTGAGTCCTGTTCAATTCGAAATTGGGTGCCTATTATTCTTATATATAACTAAATTTATACTGTGTCGCTCTTTGGTGTCCCGCACATATAGTTCATCGCTGATGTCCTTGTCTTACTATTGTTCCACAATAACTTAGGAGGATTTCAAACCAGTTCTTCGAGACCTTCTGGATAACCATCCTGGTCTGGAGTTCCTAAAGAGCACACCTGAATTTCAAGAAAGATATGGTAAACTATCGATGACATACTGAAATCATGCAACTGAAATATTAAATCCAATCTTGTATTTTTCTTCTACTTATACAGCATTGTTTGCCAGCTGAGACTGTCGTATATAGGATATTTTATTGCTTGAGTCGAATTGGAGGTGGCCATCTTACACTTAGGGAGCTAAAGCGTGGAAATCTGATTGATGGGCTGCGACATGCGGATGATGAAGAGGATATTAATAAAGTTTTAAAGTGAGACATTAAAGCATTTGGTTTCACATTATCTTTGTTGCTTCTCTCCTCTCTTATAGTTGTTATTCTCTTTTTTTGGGGCTCTACAACAAGTGCGGCACTAAAGTTTCTCATTTTTGTATAGGTATTTCTCATATGAGCATTTTTATGTGATATATTGCAAGTTCTGGGAGCTGGACACAGACCATGATTTCTTCATTGATAAAGAAAATCTTATTAAGTATGGAAATCATGCATTGACATATAGGATTGTAGATAGAATTTTCTCAGAGGTTGGTATTATTTTTTTTCTAACCAACTTCAGATTAACTATAACATTGAGTTTGTTTTGACCAATTTGATTTGATATACAATAGGTTCCTAGGAAATTTACTAGCAAGGTTGAAGGGAAGATGGGATATGAAGATTTTGTTCATTTCATATTATCTGAAGAGGATAAGTCATCAGAACCAAGCCAGGAATATTGGTAGGTCACGTTGATTTTACTACTATTTGTTATTATTCCTTAACCGTGCGATGCTCAAACTTCAATTATTGTCACTAGTATTAGAGTGTTCATTTATCTGTCTCAGTTCCTGTTGTATATCACATAGGAACGGAATCTAAATTGTTTCAAGTTTATGCATCTTCTATGCTGTTTTGATTTTCAAGTTTATGCCCCTTATGTAAGCATCAGAAACATTTCTGTGCAACTTGGGCATGCTATTAGACCTCAGGCTAAAAAGTAGTCACAGGACAAACCCCCCAAAGTAACCTTCATCAAAAGAATCTTCATGTTCCTATGGTACTTGTTTCACTGCCAATTTAAGATGGCATACTTCTTATTAATGGTCCCTTCACCAAAGTTCCCTTCATGCTAATCATTCAAATGACAAATGAATGTCACTTCTCTTATTTGTCACTTCTTTTGAGCTTGAGTGTTGAATATTCTAACAATTTCTCTTATTTGTGCTGCACATAATCTCTCTTCAGGTTCAGATGTATAGATGTGGATGGCAATGGCATTCTCACACATAATGAACTACAGTTCTTTTTTGAGGAGCAACTTCATCGCATGGAATGCATGGCCCAGGAACCTGTACTGTTTGAAGACATCTTGTGTCAACTAATTGATATGATTGGACCTGAGGTAACCAAACATTTTTCTGTATTTCTATTCTGTTACTAGGTTCTTAGGCTTTTTAAGCTGATATATTTAATTTGTTCTTGTTTCAGAATGAGACCTTTTTTACATTAAAAGACTTCCGAAGGTGCAAACTGTCTGGGCATTTCTTCAACATTCTCTTCAACCTGAACAAATTTATGGCCTTTGAAGCTAGAGATCCCTTCCTCATCCGCCAAGTAAGTCAATTGCCCACTCATATTCTGATAAAATTCAAACAATATTAGCAGATTATGTCATGCTGATAAGTGTTTATGATATATTATTTCCTGATGCAACTGCAGATGCGTGAAGAGCCATCATTGACAGACTGGGATCGTTTTGCTCGGAGAGAGTATATAAGATTGGCCATGGAAGAAGATGGTGAAGATGCTTCAAACGCAAGTGGAGATGTTTGGGATGAGTCACTTGAATCTCCTTTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006974