BGIOSGA006977

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Revision as of 02:48, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006977| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006977, complete gene.| tag = OsI_061...")
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Gene Name

BGIOSGA006977

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006977, complete gene.

LocusTag

OsI_06188

Ensembl Transcript ID

BGIOSGA006977-TA

Ensembl Protein ID

BGIOSGA006977-PA

Length

2499

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:5899857..5902355

Sequence Coding Region

5901723..5902355,5899857..5901557

Genome Context

<gbrowseImage1> name=IndicaChromosome02:5899857..5902355 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:5899857..5902355 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGAGGCAGCAGTAGTCCTAGCTCTCGGCAAGCTTGTTACCTCTTTTGGAGTATCATCACTAAGGACTTACCTAGAGAAAGAACCCGCACGGCTCCCAGATCTACCATACACTGCAAAGCACATCGAGAGGGAATTAGACATGATCCATCATTTCTTGAGCCAGGTTGGAACAAAAATCTACAGCAATAAAGTTCTTGAAGGCTGGATAGTAAGGGTGCGGAAGGTCGCTTACCGTGTTGAGGACATAACAGATGAGTACAGCTATAACATAGCTCTTGAACATGAAAACCATTTTAAAAGGTTAATACACAAGTTCTTCTATCCAACTGCTTTTCATCGCATCGCTATTGAGCTTAAAGATATCGAGGAAGAGATCAAGCACTTGTCACAGCTGAAAAGGGATTATCGAGAAATGTTCAATGAATTACTTGACAACACTAGTGATAGTGCTCATATTCATCTCCTGTCATCTAATGGTTCTCCTCATGCCGTTAAAGGAGATGACATTGTTGGGATGAAAGAAGACATGGAGCTGCTTGGCAGATGGCTAGATCCCAAGGAGTTAGATCGAACAGTAATATCAATATGGGGTTTTGGTGGATTGGGTAAAACAACCCTAGTCAGGAAGAAAAGCAATATGGAGTGCCCCTCTCATTTGGAGGAATTGTCTAGGCAGATTGTAAATAAGTGTGGAGGCTTGCCGTTGGCAATTAATGCAATAGGAAATGTATTGGCTGTACAGGAATCAAAAGAGATAGTATGGAGAAGAATAAACAATCAATTCAAGTGTGAATTGGAGGACAACCCTGGCCTAGACAAAGTAAGGAGCGCACTGAGCATAAGCTTCATGTACCTGCCAAGGCATCTCAAGAATTGTTTTTTATATTGCAGTATGTTCCCGCAAGATTATATTTTCAAGCGTGAGCTTCTTATCAAGCTATGGATAGTAGAGGGCTTTGTAATACAGCGAGGTCAGAGTACATTGGAGGAGGTTGCAGACGGCTACTTCACTGAGCTGATCCAACAAAGCATGATGCAACTTGTTGAGAACGATGAGATTGGTAGAGTTGTAAGCTGCAGGATGCATGACATTATGAGGGAATTAGCACTCTCCTTTTCTAGGAAGGAAAGATTTGGTCTGGCGGACATAAACCTTGAAACTCAAAAGAAGGATGATGTTCGCCGGCTGTTAGTGTCAAACTTTGATCAGGTGAATCAGCTGATAAAATCAAGCATGGACCTTCCTCGTCTCCGGACATTCATTGCAGCCAACAGAGTTGCTAATTATCAGTTGTTAACCTTACTAATTTCCAGGTGTAAATACCTTGCTGTTCTAGAACTACGAGACTCACCCTTGGACAAGATTCCAGAAAATATTGGGGACTTGTTCAACTTGCGCTATCTTGGCTTAAGGAGGACACGTATTAAGTCCCTACCAATATCAATTAAAAAGCTCACCAATTTGGAAACTCTGGACTTGAAATCAACTAACATTGAAAGGCTCCCAAGAGAGGTAGCTAAATTAAAGAAGCTGAGGCACATCTTTGCAGAGCAATTGTATGACCCAGAAGAGAGGCAATTGCGTTACTTCCGTGGTGTGAAATTGCCTGACTGTGCTTTTGATTTGGCACAGCTGCAGACTCTCCAGACTGTTGAAGCAACCAAGGAATCGGTGAAGCTACTGAAATACTTGCCTGAGCTGAGGCTTCTGTGTGTCGAGAATGTTTGTCGTGCTGACTGTGCAACACTGTTTTCTTCCTTATCAAATATGAACCACCTTTATGACTTGGTCATCAGCGCCAACGATCTGAATGAACCTCTGGATTTTAATGCTTTCAATCCTATATGTACAAAGCTAGAGAAGCTCACAATCAGAGGATGCTGGGACAATGAGACATTCCGAAGACCAGTGTTCTGTGAGTATGGTGCAAATATCAAGTACCTGACACTGACATTTTGCAAAAATGACACCAATCCACTCCCATCAATATCATCAAGCATGCCAAATCTGATATTTTTGAGCATACGCAGGGGATGTTGGGCTGAGGACATAATTCTCCGTGCAGGATGGTTTCCTCAGCTGAGGACTCTTTGGTTGGGAAAATTGGAGGAGTTGAGAAGGCTAGTCATTGAGGAAGGGGCCATTATTAGGCTGGAAGTGCTGCTTCTGCTGTCGCTCCCATCCCTCAGGGAGGTTCCTAAAGGTTTGGAGCTTCTTGCATCCCTCAAGAAGCTCAATGTCACGATGCAACACCATGAACTCAAGGTAGAGTGGGAACGAGACAACTGGAAAACAAAATTGCATCATATCCAAGAAATACGTTTCTAA</cdnaseq>

Protein Sequence

<aaseq>MAEAAVVLALGKLVTSFGVSSLRTYLEKEPARLPDLPYTAKHIERELDMIHHFLSQVGTKIYSNKVLEGWIVRVRKVAYRVEDITDEYSYNIALEHENHFKRLIHKFFYPTAFHRIAIELKDIEEEIKHLSQLKRDYREMFNELLDNTSDSAHIHLLSSNGSPHAVKGDDIVGMKEDMELLGRWLDPKELDRTVISIWGFGGLGKTTLVRKKSNMECPSHLEELSRQIVNKCGGLPLAINAIGNVLAVQESKEIVWRRINNQFKCELEDNPGLDKVRSALSISFMYLPRHLKNCFLYCSMFPQDYIFKRELLIKLWIVEGFVIQRGQSTLEEVADGYFTELIQQSMMQLVENDEIGRVVSCRMHDIMRELALSFSRKERFGLADINLETQKKDDVRRLLVSNFDQVNQLIKSSMDLPRLRTFIAANRVANYQLLTLLISRCKYLAVLELRDSPLDKIPENIGDLFNLRYLGLRRTRIKSLPISIKKLTNLETLDLKSTNIERLPREVAKLKKLRHIFAEQLYDPEERQLRYFRGVKLPDCAFDLAQLQTLQTVEATKESVKLLKYLPELRLLCVENVCRADCATLFSSLSNMNHLYDLVISANDLNEPLDFNAFNPICTKLEKLTIRGCWDNETFRRPVFCEYGANIKYLTLTFCKNDTNPLPSISSSMPNLIFLSIRRGCWAEDIILRAGWFPQLRTLWLGKLEELRRLVIEEGAIIRLEVLLLLSLPSLREVPKGLELLASLKKLNVTMQHHELKVEWERDNWKTKLHHIQEIRF</aaseq>

Gene Sequence

<dnaseqindica>1..633#799..2499#ATGGCAGAGGCAGCAGTAGTCCTAGCTCTCGGCAAGCTTGTTACCTCTTTTGGAGTATCATCACTAAGGACTTACCTAGAGAAAGAACCCGCACGGCTCCCAGATCTACCATACACTGCAAAGCACATCGAGAGGGAATTAGACATGATCCATCATTTCTTGAGCCAGGTTGGAACAAAAATCTACAGCAATAAAGTTCTTGAAGGCTGGATAGTAAGGGTGCGGAAGGTCGCTTACCGTGTTGAGGACATAACAGATGAGTACAGCTATAACATAGCTCTTGAACATGAAAACCATTTTAAAAGGTTAATACACAAGTTCTTCTATCCAACTGCTTTTCATCGCATCGCTATTGAGCTTAAAGATATCGAGGAAGAGATCAAGCACTTGTCACAGCTGAAAAGGGATTATCGAGAAATGTTCAATGAATTACTTGACAACACTAGTGATAGTGCTCATATTCATCTCCTGTCATCTAATGGTTCTCCTCATGCCGTTAAAGGAGATGACATTGTTGGGATGAAAGAAGACATGGAGCTGCTTGGCAGATGGCTAGATCCCAAGGAGTTAGATCGAACAGTAATATCAATATGGGGTTTTGGTGGATTGGGTAAAACAACCCTAGTCAGGAAGGTTTATGATTGGGAGAAGGGAATGAAGAGCTTTGACTGTTATTCATGGATTGCAGTATCACATAACTATAACATCATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGCATTTGAACTCTTTCATAGAAGGTGCTTCCAGAAAAGCAATATGGAGTGCCCCTCTCATTTGGAGGAATTGTCTAGGCAGATTGTAAATAAGTGTGGAGGCTTGCCGTTGGCAATTAATGCAATAGGAAATGTATTGGCTGTACAGGAATCAAAAGAGATAGTATGGAGAAGAATAAACAATCAATTCAAGTGTGAATTGGAGGACAACCCTGGCCTAGACAAAGTAAGGAGCGCACTGAGCATAAGCTTCATGTACCTGCCAAGGCATCTCAAGAATTGTTTTTTATATTGCAGTATGTTCCCGCAAGATTATATTTTCAAGCGTGAGCTTCTTATCAAGCTATGGATAGTAGAGGGCTTTGTAATACAGCGAGGTCAGAGTACATTGGAGGAGGTTGCAGACGGCTACTTCACTGAGCTGATCCAACAAAGCATGATGCAACTTGTTGAGAACGATGAGATTGGTAGAGTTGTAAGCTGCAGGATGCATGACATTATGAGGGAATTAGCACTCTCCTTTTCTAGGAAGGAAAGATTTGGTCTGGCGGACATAAACCTTGAAACTCAAAAGAAGGATGATGTTCGCCGGCTGTTAGTGTCAAACTTTGATCAGGTGAATCAGCTGATAAAATCAAGCATGGACCTTCCTCGTCTCCGGACATTCATTGCAGCCAACAGAGTTGCTAATTATCAGTTGTTAACCTTACTAATTTCCAGGTGTAAATACCTTGCTGTTCTAGAACTACGAGACTCACCCTTGGACAAGATTCCAGAAAATATTGGGGACTTGTTCAACTTGCGCTATCTTGGCTTAAGGAGGACACGTATTAAGTCCCTACCAATATCAATTAAAAAGCTCACCAATTTGGAAACTCTGGACTTGAAATCAACTAACATTGAAAGGCTCCCAAGAGAGGTAGCTAAATTAAAGAAGCTGAGGCACATCTTTGCAGAGCAATTGTATGACCCAGAAGAGAGGCAATTGCGTTACTTCCGTGGTGTGAAATTGCCTGACTGTGCTTTTGATTTGGCACAGCTGCAGACTCTCCAGACTGTTGAAGCAACCAAGGAATCGGTGAAGCTACTGAAATACTTGCCTGAGCTGAGGCTTCTGTGTGTCGAGAATGTTTGTCGTGCTGACTGTGCAACACTGTTTTCTTCCTTATCAAATATGAACCACCTTTATGACTTGGTCATCAGCGCCAACGATCTGAATGAACCTCTGGATTTTAATGCTTTCAATCCTATATGTACAAAGCTAGAGAAGCTCACAATCAGAGGATGCTGGGACAATGAGACATTCCGAAGACCAGTGTTCTGTGAGTATGGTGCAAATATCAAGTACCTGACACTGACATTTTGCAAAAATGACACCAATCCACTCCCATCAATATCATCAAGCATGCCAAATCTGATATTTTTGAGCATACGCAGGGGATGTTGGGCTGAGGACATAATTCTCCGTGCAGGATGGTTTCCTCAGCTGAGGACTCTTTGGTTGGGAAAATTGGAGGAGTTGAGAAGGCTAGTCATTGAGGAAGGGGCCATTATTAGGCTGGAAGTGCTGCTTCTGCTGTCGCTCCCATCCCTCAGGGAGGTTCCTAAAGGTTTGGAGCTTCTTGCATCCCTCAAGAAGCTCAATGTCACGATGCAACACCATGAACTCAAGGTAGAGTGGGAACGAGACAACTGGAAAACAAAATTGCATCATATCCAAGAAATACGTTTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006977