BGIOSGA006979

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Revision as of 02:48, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006979| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006979, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA006979

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006979, complete gene.

LocusTag

OSJNBB0031B09.25

Ensembl Transcript ID

BGIOSGA006979-TA

Ensembl Protein ID

BGIOSGA006979-PA

Length

3983

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:5890382..5894364

Sequence Coding Region

5894012..5894364,5893685..5893702),complement(5892073..5892109,5891751..5891987),complement(5891626..5891673
,5890580..5891004),complement(5890382..5890451

Genome Context

<gbrowseImage1> name=IndicaChromosome02:5890382..5894364 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:5890382..5894364 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAGCCGTCACCTCGACGGTCGCGGCCCGCTTCGCCTTCTTCCCGCCGAGCCCGCCGTCGTACGGCGCCGAGGCCCCGCCTCCCCCCGCCGCGGCGGGCGCGGGGGTGGGGGTGGAGAAGGATGGAGGGGGAGGAGGGGTGGTGGTGGAGCTGACGGATGTGCCGAGGAGGGGGAACGTGGAGGCGAGGCGGCTGCGGACGAAGCGGGGGACGGAGGTGGTGGCGATGTACGTGCGGCAGGCCGGGGCGCGGCTCACGCTGCTCTACTCGCACGGCAACGCGGCCGACCTGGGCCAGATGTTCGAGCTCTTCGTCGAGCTCAGCGCCCACCTCAACGTCAACCTCATGGGGATTAGGATTCGCAGGCTCTATGACTATTCTGGTTATGGGCAATCTTCTGGGAAGCCCAGTGAGCACAACACTTACGCTGATATAGAAGCCGTTTACAGATGTCTTGTAGAAACCTATGGAGCCTCCGAGGAGAATATCATTCTTTATGGACAATCAGTGGGTAGTGGTCCTACTTTGGATTTAGCCTCCCGTTTGCCTCATTTGAGGGCAGTTGTTCTGCATAGCCCAATTTTATCTGGCTTAAGAGTGATGTATCCTGTAAAACATACATACTGGTTTGACATATACAAGAATATTGACAAAATTCCATTAGTCAGATGCCCTGTGTTAGTGATTCATGGTACAGCTGATGAAGTTGTCGACTGTTCCCATGGGAGGGCATTGTGGGAGCTTTCCAAAGTAAAGTATGAGCCTCTATGGGTCAAAGGAGGAAACCACTGTAATTTGGAACTGTACCCAGAGTACATTAAGCATCTAAAGAAGTTTGTTGGGGCCATTGAAAAATCGCCACCCCTATATGATGAATCTCCAGAGAGCTCAGGTCCATCAGATAATACTCAAACAAACCCTGAAGGCACAGAGGAATCTAGGAAAAGCACAGACTGCAGGGAGAAAACAAGGTCAAGCATAGATCACAGACAAAGCACAGATCGCCGGGACAAATCAAGGGGCAGCACAGATAGGAGGGATAAAAACAGAAAGAGTGTGGACCAACCACGGGCTAGTGTCGATCAGCCTGATCGGCCAAGGAAAAGTGTTGACCGCTTTGGTGGGGTGATGAAGTCCGTCAGATATATCGACTGTTTCAGAGTAACAACTGCATCTGGGAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MGAVTSTVAARFAFFPPSPPSYGAEAPPPPAAAGAGVGVEKDGGGGGVVVELTDVPRRGNVEARRLRTKRGTEVVAMYVRQAGARLTLLYSHGNAADLGQMFELFVELSAHLNVNLMGIRIRRLYDYSGYGQSSGKPSEHNTYADIEAVYRCLVETYGASEENIILYGQSVGSGPTLDLASRLPHLRAVVLHSPILSGLRVMYPVKHTYWFDIYKNIDKIPLVRCPVLVIHGTADEVVDCSHGRALWELSKVKYEPLWVKGGNHCNLELYPEYIKHLKKFVGAIEKSPPLYDESPESSGPSDNTQTNPEGTEESRKSTDCREKTRSSIDHRQSTDRRDKSRGSTDRRDKNRKSVDQPRASVDQPDRPRKSVDRFGGVMKSVRYIDCFRVTTASGS</aaseq>

Gene Sequence

<dnaseqindica>1..353#663..680#2256..2292#2378..2614#2692..2739#3361..3785#3914..3983#ATGGGAGCCGTCACCTCGACGGTCGCGGCCCGCTTCGCCTTCTTCCCGCCGAGCCCGCCGTCGTACGGCGCCGAGGCCCCGCCTCCCCCCGCCGCGGCGGGCGCGGGGGTGGGGGTGGAGAAGGATGGAGGGGGAGGAGGGGTGGTGGTGGAGCTGACGGATGTGCCGAGGAGGGGGAACGTGGAGGCGAGGCGGCTGCGGACGAAGCGGGGGACGGAGGTGGTGGCGATGTACGTGCGGCAGGCCGGGGCGCGGCTCACGCTGCTCTACTCGCACGGCAACGCGGCCGACCTGGGCCAGATGTTCGAGCTCTTCGTCGAGCTCAGCGCCCACCTCAACGTCAACCTCATGGGGTACGTGCGCGCGCGCCCCGATTGGGTGGATTGCCTTTTTAGATTGGGAGATGCCGTGCTCTGTCGCCCTCGTGGATTCGAGTTCTATCTCGGATCTTCCGGGTGGGGCGTATTTTCCTGGATCAAAGGCTCGAAGCTACGATTTTCTAGGATTAGTTAGTATTGGGAACGTTAGATTTTCCGGGCGGATCAGTAGGATGGCTGTTTTGTAGTTTCGACGGATGCCGCTAGCTTCTCTTCATCAGGGCTCGTTCGATTAGGTTGATGCTTTGGTGTGATGTTGATGTTGAATAGTGTCCTGTGCTGTAGGATTAGGATTCGCAGGCTGTAAGTCTCTGATTCCATGTGAATTTTTTGACTCATGATCTCGTGTGTTCTGTTGCATCTTGGCATGTATATTTTGTGTTTGCTAATGGGGTTATCTGATCATTTTTCTTTTTCCCTTGAAGCCGATCTTTTTAATGATTGATTGGGATAGCTTCTTGTGTTCGAATTGTTATCTACTCTTGGTGATGTAGATGGTGAAGCATGTCCACTTAGGTGAAATTTTTTGACTTTTTATTGATCTTGGGTAGCAAGAATGATATTGATAAATCGCTATCTGGTTCTGTACGGGTATTTCATGAATCGCTTTTTTCTATGGGAGACGGTGGGGAGCTCGGTGCTTTTGGATACTTGATTTGTTACTATCTCAGGTCATAATTTGAAGCTTTGGATAATTTTCTTCAATTAATTGTTAGATATTAACATTTAGCTGAGTTTAATCTACTGTTTCATTAGATTTGTTAAACAATGGCTGTAGTGAAAAGAAAATGTTTGCAATGAAGGTTTGGTTGAATTATCGTGTACATGAAATTGTACCGTTACTTATTAATAAAGTGTGTTGAGGAAACCAATAGTTAACAAATCTTTTCACTATATTATTACATGCATTCATTTTCTTCCCTCTTGTAGCTCTTATAGAAGAGTTAATGTCAGGGTTGCCATCTGTCTTTGGTAACCTCCATATTGTTCTGCAAATGTCTGGTCATGGCCTTGTGGGTTCTCTGCGAGAACATTCAAACAGTTGAGTAATTTGTGTCAGTACTGCTGGGTACCCAGAGGTAGAGAAGAGATAACACAAATCACCATTCTGTTTGTTTGTTTGCTTCTGTTCTTTGGTCCAAGTTACCTGATACATTGGATGAAGGGACCTTTGCTCTTTTCTTTATTGTGTTTCCTTGCCAGATTACCTTTATTGTGGTGGAAATTATGCTGTGAAGGTTTGGCCTAGTGAATTGTTAGATGATGTGTGGTCTGGTTATTGGCGTTGCTGATGGGAGAACCATTGATTGATTCAGTGGATCTTGCAGCTCTAACTAATTTTATATTTTGTGGTTAGGAGTAATTGGCTTGTCCTTTCCTCCTTTTTTAACTTCGCCTTTTTGTTTGTTTCCTAGCATAGATACTAATATAATCGTTATTTGTTTGTCTGTGTATAGCTATGTCATTTGTCTGTTGAACCTAGTTTTGTGCTTTTTATGTGCTCACTACTTTTTACCAAGACTATGCATGTGTACTAGTTGCTAGTATTTGACTGCGTAATGCAGTTCTAGGCCACCATAGAGGCTCCTGCTAACATGGTCCATGATGACTAAACTAACAACTGATGTAACCATTTATGAGGCTATAGTTTTAGTCTTAAGTGATCAATCCGTTCCTTGCCAGCTTATATGGTTGAGTGTTGCATCTATAACTCCATGTTTTACTCCTAATGTAATATTAGCACCTTGCACAAGGAAAGTTTCACAACCCACAACTGGGAGGATATATCAAATGAAGCCACCTGACATCACTCGATGAGCTTCTTCTTTTAAGGCTTATTGTAGCTCTAAATTAATACCTTCCGTCTTCATTCTGCAGCTATGACTATTCTGGTTATGGGCAATCTTCTGGGAAGGTAAGATTTTTGTATACACATATTTTATGCCGAATCTCTTTGATGTGCATAGTATTAACCTTTTATTTTTTATCTAATACCGCAGCCCAGTGAGCACAACACTTACGCTGATATAGAAGCCGTTTACAGATGTCTTGTAGAAACCTATGGAGCCTCCGAGGAGAATATCATTCTTTATGGACAATCAGTGGGTAGTGGTCCTACTTTGGATTTAGCCTCCCGTTTGCCTCATTTGAGGGCAGTTGTTCTGCATAGCCCAATTTTATCTGGCTTAAGAGTGATGTATCCTGTAAAACATACATACTGGTTTGACATATACAAGGTAATTAATTTGCATTATGTCAACCTTTTTTGACACTTAACTTTAGTTAATTCTGTATTTTATCTCTATTTCTGCAGAATATTGACAAAATTCCATTAGTCAGATGCCCTGTGTTAGTGATTCATGTGAGTACCATTTCATCCTCACAGCAAATCTTATTATTATTATATATATTTGATTCTTTTTGTGCATGGTGTGCATGTGCTCATGCACTTGTTTGTATATTTACATAGTGAATTAAATCATTGGAATATGAAATCAACAACAGTTATATGTATGTTCCTCATATATGCACACTGGTGCATGGTGATAATTGTAATGTTACATAAGTGAAGTTTAATGAAGCAGTTCTGGTGATTTAACTACCAATTGGACCATTCTTTTATTGACCTACACCCTAGCCTTTAGTTTATTTTTTTCCTGTTATTTTTTAGTGCCGTTAGTGTGCTTATGTGACAGAAGCAGTGCTAGCAATGCATTTAAAAAGATGGCATGGAAACTAAATGTGAATGCCTGTAGAAGTTTTTTCAGTTCACTGAGATGAAAAAACTGGCAATTGAGGGCAACATATTCTGAAAACACGGGACAAGTATTCTGTTAGCAGCATCAGCTTTATCATGACTACCGCTTGCTACATTATTTTACTTGGCAACAGATTTATGATGTGAGAAAGAACCTATTCATTCTAATCAAGATGTAGAAGAAAGTTGATGATGCTAAGGTACTAACACAATCTCTTTTCCCAGGGTACAGCTGATGAAGTTGTCGACTGTTCCCATGGGAGGGCATTGTGGGAGCTTTCCAAAGTAAAGTATGAGCCTCTATGGGTCAAAGGAGGAAACCACTGTAATTTGGAACTGTACCCAGAGTACATTAAGCATCTAAAGAAGTTTGTTGGGGCCATTGAAAAATCGCCACCCCTATATGATGAATCTCCAGAGAGCTCAGGTCCATCAGATAATACTCAAACAAACCCTGAAGGCACAGAGGAATCTAGGAAAAGCACAGACTGCAGGGAGAAAACAAGGTCAAGCATAGATCACAGACAAAGCACAGATCGCCGGGACAAATCAAGGGGCAGCACAGATAGGAGGGATAAAAACAGAAAGAGTGTGGACCAACCACGGGCTAGTGTCGATCAGCCTGATCGGCCAAGGAAAAGTGTTGACCGGTATGGTTACCTTGTTGACCTATGATTTTCTTTTTCTTTAAGACCATAATGCTGTGTATGTATCAACTATTTCTACAGGGTTGATATATAACATGTTTTCTTGACTAATTTGATCCATGGTGTAACAGCTTTGGTGGGGTGATGAAGTCCGTCAGATATATCGACTGTTTCAGAGTAACAACTGCATCTGGGAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006979