BGIOSGA006988

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Revision as of 02:49, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006988| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006988, complete gene.| tag = OsI_061...")
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Gene Name

BGIOSGA006988

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006988, complete gene.

LocusTag

OsI_06171

Ensembl Transcript ID

BGIOSGA006988-TA

Ensembl Protein ID

BGIOSGA006988-PA

Length

4065

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:5776837..5780901

Sequence Coding Region

5780721..5780901,5780517..5780619),complement(5780194..5780293,5779504..5779565),complement(5779197..5779384
,5776837..5777285

Genome Context

<gbrowseImage1> name=IndicaChromosome02:5776837..5780901 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:5776837..5780901 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGTCCCCCGACGCCGCCGCCGGCGATATTGAGAGCGCCCTCGACGACTTCGCCCGCGCCGACGCCGACTGCATCGCCGCCGCCCTCGCCTGCGGCCGCACCAGCTTCTCCTACCGCCGCCTCCCCGAGCCGCGCCGCCTCCGCCTCACCGTCCGCAAGCTCGACGACTCCTACTTCGATGTGCAAATCGCGAGGTCAGCCGCGGTGTGGGAGCTCAAGGCGGCCATCGAGGACGTGTTCGCCGCGCTCTACGATGAAACGGACAACAAGGCCATCTCTTGGCAGCACGTGTGGAGCCACTTTTGCTTATGTTTCAAGGACGAGAAATTGACAGATGACAAGGCAACATTGCGTGCATTTGGTATAAGAGATGGTGATGAGCTTCATTTTGCCCAGCATCTTTCTGTTGAATACAGACCCTGCAAGTCCCTTTCCCTCAGAAGGTCAAGGACTTCATTGGATGATTTCAGTGCTAGGTCAAGGAGTTTGTTGGACGATCTCGGCGAAGATGATGGTGATAAGTTTATCGACACGAGGCATTCTACTAGTGTTTTGGAGGAAGGGCTATATGTTTATCAGCACGATGAGGAGTGCATGGAACAGAGTCGCAAGAAGGGAGGCTTCTTTAGCGCCGTCGCTGTCGCCGCCGCCGGGAAGGACGACATCGACGCCGCCGCCTCCGGGAAGGATGACATCGACGCTGCCGCCGCCGGGAAGGACGACATCGACGCCGCCGCCTCCGGGAAGGACGACATCGACGCCGCCACCGCCGGGAACGACGAGTTCGCTGTTGCCGCCGCCGGGAAGGACGACTTGGACACCGATGCCGCCGCGCGGGAAGGACAACATCGACGCCGCCGCCGCCGGGAACGACGAGTTCGCTACCGCCGCCGCTTGCTTCAACGCCGCCGCCGTTGGGAAGGACGAGTTCGATGCCGCCGCCGTGACCTGCTTCAACACATGCCAAAATCCGCCGCTCGCCGCCACTTGATTGCTTCAACGCATGCCGGTGCCACTCTCTTCCGATCCTATCCATGCCGGAACAAACGGCAGATGTGTACTGGTACTGAGCGGTACTAG</cdnaseq>

Protein Sequence

<aaseq>MPSPDAAAGDIESALDDFARADADCIAAALACGRTSFSYRRLPEPRRLRLTVRKLDDSYFDVQIARSAAVWELKAAIEDVFAALYDETDNKAISWQHVWSHFCLCFKDEKLTDDKATLRAFGIRDGDELHFAQHLSVEYRPCKSLSLRRSRTSLDDFSARSRSLLDDLGEDDGDKFIDTRHSTSVLEEGLYVYQHDEECMEQSRKKGGFFSAVAVAAAGKDDIDAAASGKDDIDAAAAGKDDIDAAASGKDDIDAATAGNDEFAVAAAGKDDLDTDAAAREGQHRRRRRRERRVRYRRRLLQRRRRWEGRVRCRRRDLLQHMPKSAARRHLIASTHAGATLFRSYPCRNKRQMCTGTERY</aaseq>

Gene Sequence

<dnaseqindica>1..181#283..385#609..708#1337..1398#1518..1705#3617..4065#ATGCCGTCCCCCGACGCCGCCGCCGGCGATATTGAGAGCGCCCTCGACGACTTCGCCCGCGCCGACGCCGACTGCATCGCCGCCGCCCTCGCCTGCGGCCGCACCAGCTTCTCCTACCGCCGCCTCCCCGAGCCGCGCCGCCTCCGCCTCACCGTCCGCAAGCTCGACGACTCCTACTTCGGTATACCAAATCGGCTCTCTTCCTTCTTGCCATGGAATCCCCTCCCATTGGATTTGGGGTGACGCGTTGCTGTGTTCGTTCGTTTCTTGCTGCTTGGGTAGATGTGCAAATCGCGAGGTCAGCCGCGGTGTGGGAGCTCAAGGCGGCCATCGAGGACGTGTTCGCCGCGCTCTACGATGAAACGGACAACAAGGCCATCTCTTGGTACGGCTGCATGCACATCAATCTTGATTTGCAAATGTACCAACAAATGCGGCGAAAAAAAAAAGTTTCCCCTCTTTGCATTACATTGTGAATTTCTAATATTCATTATAGTTTCCTATCTTGGTTTGTGAAAATGATTTCGGTGGTTCCTGAGATTTTTTTTAGTTTAGTCTGTGTGTTGGGTTGATATATTGGTAACTAAGCATTGTTTTGCTTGTTTTAGGCAGCACGTGTGGAGCCACTTTTGCTTATGTTTCAAGGACGAGAAATTGACAGATGACAAGGCAACATTGCGTGCATTTGGTATAAGAGATGGTGATGAGGTATATGCATGATCTCTATTTGTGATTGGCTCATGGATGAATCTTTAGTGCCGACTAATTCTCCTATTTTTCTTGAGTATGTGTCATGTTTATGCAATTGTGACACATTAGTACACGATAGATTGCTGAATTTGCAAATAAAAATAGGCATAATTTCTTTGTTCATGCACAAGATATGCCTATGTTATTAGGCAATTTTCAGGATAGACACTATTGCGTGTGGGTAAGCTCTCTAGTCAAGTACTACCATTAATTTGTCTGAATTCCTGTTGACTTTTCATGATGCCATTTGTGGTCCTCTCACATCAAATTATTGTTTCAGTTTTCAGAAATAGGGTAAGAGCAAATCTAATTCAGCAAAATCTTGCACTACTTTTGATCTCTTCTATTTCTTGGTCTTAGAGATTTAGGTGGTTACCGAGATCTTGCATGGTCTGCTTTGTGTAAAGAACGACTAAACTAAGAAAAGGATCCACTCTTACAGCTCACATGGGTTTGACTGGATAAGCACATTCAAGCATGCATGTCCACTAATTACATCTGTTCGAGTCTTAAGAAATCCTTTGTAAATTGAGTCATGTTTCTAAATAACTCTCCTTGTGTTTACCGCCTTCAATCTTTTGTGCAGCTTCATTTTGCCCAGCATCTTTCTGTTGAATACAGACCCTGCAAGTCCCTTTCCCTCAGAAGGTACCCTGAGCTTCAAACGCCCCTGAGGGCTTTTCGTCTATTTGATCTACATCTTCCATTTTGTACAACTTTATTGGATGTTCAGAATTGATGACATTCCTAATGATTTCTTATGTTAGGTCAAGGACTTCATTGGATGATTTCAGTGCTAGGTCAAGGAGTTTGTTGGACGATCTCGGCGAAGATGATGGTGATAAGTTTATCGACACGAGGCATTCTACTAGTGTTTTGGAGGAAGGGCTATATGTTTATCAGCACGATGAGGAGTGCATGGAACAGAGTCGCAAGAAGGGAGGCTTCTTTAGCGGTTGGTTCTCCTATTCTAGATTGAGGGGCAACAGTAGGACACATTCAGAGGATGCCATCCAATCCTCCTGCGAAAAGAGAGATAATCGAACTCGGCCAAAGCTGGGGAGATGGTTGTCTTCCAAAAAAACTAAAGGCACATAGCAATCTAGATTGCCAACTGTATCTCACACGTGTTGCTTTGTTCTTCTGAAATGAAAATCAAAATTACATTCTTGTCAGCATGATATGAATGCTTCTTACTTCAACACGATGAGAAGTGGCTCCTGGCATAACTTGGAATATATACCTTTAACTTAGTCAATATCAGAGTTTTCTCTGTATGTATATATACGTATGTGTACTGTCTGACTCTTGTGCAGCTATGCTTGGTTGAAGAAAAACAATGACAAGTCCTACTATGTGGTGCAACCGTGCAATGAAATATTTCTCCTCTCTACTGAATCTTTCGTTGCATAAGAGATAAGAGACATGCTTGATGCCTAACAGATTTTCACGGAACATTTAGTGAGCCAACTCTCTCAAATTTTGACGCTTTACAACTTACAATTTATTGTCATCCTACACATAGAATGAACCCAAGACAACTTGGGCCAAAAAAAAAAAAAACTATCCATACTAAAATGAACAAATTAAACATTTAAACAGATCAAAGTGTAGAAGCTAACTGAGAAGCAGCAGCAGTAGAAGATCAAAGTGTAGAAGCTAACTGAGAAGAAAGTGTAGAAGCTAACTGAGAAGATCTTGATTATCACACAGAGCTTGAGATCCCCAGGGCTATGTCTCCAGTTCTCCACAACACAAGACTACTAATGCCCAGGGCCTCGTGGACTCGGTCCGGCCCTGGCGACGGCGAACACCGGCAGCCTCCCCACCGAGAACCCGCCGCCGCCGCCAACGTGATCACGCAGAGGCCTCGAGCACTCCACCGCCGTGCAAAGCAGCAACACCACCACCACAAGAACAGCCAGCTGCATCAGCGACAACGACGACGACGACCGAAACCCCATCCCCAACTCCGCCGCGCTGCCAAGAACACTCGAACAAGCTAGCTATCTTGAAGATGAAGAAGATCGCGGTCGTAGGAGCAGGAGTAGTAAGGGTGTTTGATTGGCAGAGGTTGGCCATGGCTGGGAGGAAGAAGAAGATGTGTATATAAATGGAGGAGGCATAGCAGAAGTGCAGGACAAGAGACGTGCGTTGAATTGAACGCGCGGACTTTGGATGGATGAAAAGCGGAGAGGAGTTGACAAAATGGATGGAGGAAAAGTGGTGAAGTAGGCTTGATCTCGTTAACCTTCTTCGGATTCTGAACAAAATCTTCTTCCTTCCCCTCTCCTTTTCATCATCGTCTTTTTCTTTTTCTTGCTGATGTTGCATTTACACCTCCTGTTTGACCACCAGTGCAGTGCAGTGCAAATGCATGGCTAGTTTGGAGGTCTGGTGTTTTAATTTGATTTATTTAACATGATGCAAATCTGCATGCAGTTGGTGCTGGTCTGAATGTTTTGTGCTGGAATGACACATTCAGAGCTTTTGCTTGGTGCTTTGATAATTTAATAGAGGAATTCTAAATGTAGGGGAAAATGGTGTTGCGGTATGTTCAAAGTTTCTTTTTTGAGTCGTTGTTACGGTACAGCGGTCTGTACCAGTACCGCCCGATACCAAAATCCTAGCCGTTGGATCTGGCCCGATCCAACGGCTAGTAGAGTTTGGTACCAGGCGGTACCAATTCTATCCCTATCCAGTACCACACAAAGAACTGAGGTAGAAGGGCAAAAAACGTAACTTCGTATGCAGTAACCAAATCGGGAGGGATGGACGGGCAGCTCGAACCCTAGAAGCGGCGGGATTCTCGATCGCCGTCGCCACCTCGTGGATCGACGCCGCTGACTCCTGGAGGTGAACTCAGCCGTCGCTGTCGCCGCCGCCGGGAAGGACGACATCGACGCCGCCGCCTCCGGGAAGGATGACATCGACGCTGCCGCCGCCGGGAAGGACGACATCGACGCCGCCGCCTCCGGGAAGGACGACATCGACGCCGCCACCGCCGGGAACGACGAGTTCGCTGTTGCCGCCGCCGGGAAGGACGACTTGGACACCGATGCCGCCGCGCGGGAAGGACAACATCGACGCCGCCGCCGCCGGGAACGACGAGTTCGCTACCGCCGCCGCTTGCTTCAACGCCGCCGCCGTTGGGAAGGACGAGTTCGATGCCGCCGCCGTGACCTGCTTCAACACATGCCAAAATCCGCCGCTCGCCGCCACTTGATTGCTTCAACGCATGCCGGTGCCACTCTCTTCCGATCCTATCCATGCCGGAACAAACGGCAGATGTGTACTGGTACTGAGCGGTACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006988