BGIOSGA006990

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Revision as of 02:49, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006990| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006990, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA006990

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006990, complete gene.

LocusTag

OSJNBB0031B09.7

Ensembl Transcript ID

BGIOSGA006990-TA

Ensembl Protein ID

BGIOSGA006990-PA

Length

5770

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:5764660..5770429

Sequence Coding Region

5770415..5770429,5769148..5769231),complement(5764865..5765708,5764660..5764721

Genome Context

<gbrowseImage1> name=IndicaChromosome02:5764660..5770429 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:5764660..5770429 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCAAGGACAAGCTGCTGCTCCAGATCTTGCGCGTCACTGCCTGCTCACCAGCACGCAGGAGCAAAGCTTCCCATGTGCCTGATGTCGCGCCGGTGGGACAAGGCCCCGTGGTGCCCAAATTCGGATCGTGGGACGCCGAGAACATCGGCTACACCGTCTTCTTCGACAAGGTGCGCGAGAACAAAACCGCGCCCACGCCGGCGACGGCGGCGCCGGCGACGCACGACGACGACTACGAGTTCGATCCCTACGAGCACTACGAGAACCTGAGCAGGAAAGCGGCGTCGCGCCCGCCGAGCTCGCACGGCCACGGGCACGGCCACGCGCCGCCGCCGGCGCACCACCACCACCACCACCGGGCGCCGACGCCGCCGCAGCAGCAGCAGCATCACCACCACTACCCGGCGTCGCAGCGTAGCGGCAATGGCTACCACCGGAGGAGCGGCAGCAACGGCAGCAGCGCGGCGTCCGAGGCCAGCAGCCGCGGCAGCAAGTTCTCGCCGCCCAAGCCGTACCAGCCGCGGTACAGCAGCAACAGCAACAGCGGCGGCGGCGGCGGCGGCTGCTACGGGTACGGCGGCCCCGGCGCCGGCGCGTACGCGGCGCCGCCGCAGATGCATCACCACCACCACCAGCAGCAGCACGCCGCGCAGCCGAGGGTGGCCGCGTCGCCGCCGAGCCACGCGCTGCCGCAGGTGAGCCGCGCCGCGAAGGCGGCATCGGCCGTGCCCAAGTTCGGCGTGTGGGACGAGCAGAACGCGGCGGCGGCGGGGCAGGGCTTCACGGTGCAGTTCGAGAAGGTGAAGCGGCACCGGGAGGTTGCGAAGGCCGCCGCCGCCGCCGGGCCGGACGTCACGCCGCGCATGTCGCCGGCGCAGGCGGCGCCGGCGCGGCATCCTCGGAGAAAAGCCGAGAAGAGGTCCTTCTTATCAAAGGCACGTGTACAGGTGCATGTTCCCAAGGGTGAGGGAGTGAGGCAGAAGCTGGATTTGTATTATTAA</cdnaseq>

Protein Sequence

<aaseq>MGKDKLLLQILRVTACSPARRSKASHVPDVAPVGQGPVVPKFGSWDAENIGYTVFFDKVRENKTAPTPATAAPATHDDDYEFDPYEHYENLSRKAASRPPSSHGHGHGHAPPPAHHHHHHRAPTPPQQQQHHHHYPASQRSGNGYHRRSGSNGSSAASEASSRGSKFSPPKPYQPRYSSNSNSGGGGGGCYGYGGPGAGAYAAPPQMHHHHHQQQHAAQPRVAASPPSHALPQVSRAAKAASAVPKFGVWDEQNAAAAGQGFTVQFEKVKRHREVAKAAAAAGPDVTPRMSPAQAAPARHPRRKAEKRSFLSKARVQVHVPKGEGVRQKLDLYY</aaseq>

Gene Sequence

<dnaseqindica>1..15#1199..1282#4722..5565#5709..5770#ATGGGCAAGGACAAGGTGAGGCGAAACAGAAGAAAACACCCCCTGTACTAAGGACTGGTGCAAAGATGTAATATACCTTACGGTTATGAGTTATGACTTAAGTTGTTTGACATGTTGGGCCCCTATTTATATTTGTCTGGCTAAAATGCTAAATATACTTGATTGCCTCCCATTGTATGAATTGTTAGTCACATTTTCTTTGGCCTCTTATTGCAGCATGACTGATTAAAGAAATAGCTCGATGACTATTTTCTGCCATAATATTCCCAGCTATGCTCATCATGGAGTAAATTCATCACTGCATTTGCTGATTTCATTTCTAACCCTGACTGGTTTGATTTTGCTTGGTGACTCTGGGATCCATACGGAGTTACAGTGATATTAGTGCATCAGTTTTGCATGCCTTCTCTTATTTCTCTTGTTGAGATCTGCTTTTCTCCTTTTCACAATCTAAATCTATTGGGGCATTCAATGATTGTTGGTTTCACATGCCCCTGGTTTCTTTATCATTTTAGGTATTATTGGTGGCACTAGTTCCAACAGACCCGGCCACTGACTACCCACTTGTTTATCCAGTAGTAAAATGCAACATGAGCAGATTATGGGGTAACAAGTATGGTAATGACCTATTTGGCTATTTCCCTGTGTGCTTGTCTTATGGCATTATGTATAACACTAGTGATTAGTACCATTTTCTGTTGTACCTTCTTTGTTTTGTTGCAACTTATTTAAATAAAAATGGATATGGTGATTGGTGACCTCTGTTCATTCCTTTAAATGCGTGTATCTGAATGAATGCTGCAGTTTGTTTTCCTCCATACTTTCTCCTGTCCAGTACTACTTTCTTTTTAATATCATCTTGTTAGTTTCTGGAGCTAACCTTGATATTGCTGAACATATATATACCTCACGATGCTATTTGCTGCTAGAAAGCTAAAGAAAACCATGAAGCTAGCCACCAAAGGTGCCGCAAATCTTGCGTGCACAATTCCAGGTTTTTTCCATGATAATCTGGACGCTTGTGCTGTTGTGCAGAGTTAGCTGCGCTAATGGCTATCACTATTATACTAACATTTTATCTTAGCACCTGCTCCGACATTGTTGCCATTAGTTTATTGATGATGATCTGATTAGTTTCTTCTCTTCTTTTTTACACACTGGATTAAACTGACTACTGCTCTCTGCTCCTTTGTTTCAGCTGCTGCTCCAGATCTTGCGCGTCACTGCCTGCTCACCAGCACGCAGGAGCAAAGCTTCCCATGTGCCTGATGTCGCGCCGGTGGTGTGCAATTCCGGCGACAACGACGGCGACGGCTATAATAATCGATCATGGGCGCTCGTAATGAAGCTTCTTTCAGTTATTGGGATCAGGAAACTATTTTAAATTCTCGAGAGGACATCCTCTTGTTATTTGTACTCTCGTTATTTGTATGTCATCTAAATGGTTATAAAAAAATTTAAAAAAATCAACAAAATAAATTAATGTGTGATAAATCACTTCAGAAACATGCAAGGTCAAATTTAAATTCTACAAGTTGCAAAAAAAAAACAAATTTAACGGTGGATATACATTAAATAGCAATAGTTTAATTTGTTTTTTTGTTGCAACTTGTAGAAGTTGAATTTTAACTTCTATGCTTGTGGAGTGATCTATCACATATTAATATATCTAGTTGATTTTGTTTTAAAAAAAAATTCATAACCATTTGGATGACATGCAAATAACGATGGAATGTCCACTCCCTATTGAGGTCGCCATTTCAAGATTTTTTTTTTCTTTCTTTTGCATCATCATCAAGCCACAGGCGGTGCGTCGGCTTGCTTCTCTTAAATTTCTCTTGCAATTTGGTCGCTTTCCGGTTTGTGTTGATATCTTAAATGCATCAGCTATTTGATGAAATGTGTGAGCCAGCTAATGTGGCCTGTACTGCCAGTGCTTTTGATGTGCCGGAATGGGTACAAATTGCTGCTTGCTTTCATATGGCACCAACAACATGAGAGCATTGCTGAAAGATGTGTACTCGAAGTACGACAGACCGTGCAAGATTGCACGATATGTATTTGCTCTTTTTTCTCTTTTTGGTGAATGTGAACATGTGATTATCTGAAATGTACAGCAGAAGAATACGTGAAGTTTGTGTGAAAACAATAGAAAAAGATCACTGGATCAAGACTTGTGAGGCTCTGAGATCTTGAATTTCTTGCCCTAGTTTTGTTATTTTGAGCAAAGGCTCGGTTCAGTTTACTCTTCGTTTTCATCCAATGGCTGAGAAACATGCTCCCAATTCGTGCCGGAACGGGTACGAATTGCTGCTGGCTTTCGTATGGCACCAACAACATGAGAGCATTGCTGAAAGATGTACTCCTTTTGTCCATAAAAAAACAATTTCTGGCTACAAATCTGGATGAAGAATGAGTATACTCGAAGTATGAGAGACCATGCAAAATTGCACGATATGTGTTTGCTCTTTTTTCCTTTTTGGCGGATGTGGTCATCTGAAATGCACAGCAGAAGAAGAATACGCACAGTTTGTGTAAAAACAATCAACAAAGATCATTGGATCCTGACTTGAGAAAATCTGAACTCTTGAATTCTCGCCCTCATTTTGATATCTTTGAACAAGGCACGTTCACTCTTCTTTTTCATCCAATGGCTGAGAAATACTCCCAATTGGGGTAGAAAAAGGTTTGTTCAGTCTGAACAAACAACCCTATCTGACAGAGATCTTGACATTGCATACAGCACACAGGAACAAAAAGAAAGATATGCTATGCATGAGTAGCTCAAGTTCAGTCCAGTAAAACAAACCTGTTGCCCTAGGACAAAACCAGGTGCTGTTCATACCTTGCAACTTGCCAAAGATACAACTCCTTATGAACATGATTGCATTACCAAAAGCCTAAAATACTGCACTTTGCATGTTCATATGCTGCAAGGACCAGGTGAGAAGAGAGAGAGAGAGAGGAGGGTTGCAAAAGCAGAAGCCAACTCAAGAAACAAACAACCACCATGTCCTTGGGTAGGTAGGTAGAAGGTTAAAGGCTTGAGCTGTTCTTCTTCTCTCTTTTGCCTTTCCAGTTTCCTTCACCTGCAACTCTGTTATTGTTACACCTCTCTATCTCCATAAAGGCAGTGGTACATACACTGGCAGGCAGGGCAAGGGCAGCACATTCTCTCTTCCAGCTGCCACCCTGTTGAGTTTTGCTTGCACAGAGTCACACAGCTGGGTGATCTCCTTTAATTAGGAATTTAGGGAGGCTGTCAGTTCTGAACCCCAATCATAAAACCATCCCTGGTTTCTCTGTCCTGTCCTGCCATCATTCCTGCCTGCTTCTGCTTTCTCTCTCTTCTCTTCTCTCCTTTCCTCTTGAGAAAGAGGAAAGGGAGAGAGAAAGAGGAGAAGAGCAATTCAGCCCAAGAAGGAGAGGCCTTCATCTTCACCTGATCGGTTCTTCTTCTTCAGCAGGCAGCATAGTACTTCATGGCTGTGAGTACAATTAACTGATTAATTTTACATCTTCATCTTCTTGTTTGTTGATTGCATTTGCATATGCTTGTCTCTGCATCTAGAATCGTTCAATTGCTTCCAAACATGAAAATGGTACTCCCAATCCATTCTTGCTTGATCATGTGAGATGTTCTTCTTTCTCTGCTCCAATTACGGTGTGCCCATGATTGCTGCACATAATATCACCATCACCATCATTTTTCTTTAAATTACTCGATTAAAAAAAGCAAATATTAGGGAATGATTTAATATCAAATAATTAGAAGGGGTTAGGCTTCGAACCCAGATCGTCTAGTCCACCACCTTGTGGAGCTAGCCGGAAGATCTACGAGTGTTTCTCAAATTACTCGATTAGTGTCGCTGTGTTCAAGCCAATTACTATCAAATTAGGCTCATGAGTTGGGCGAGGCTACTACTACCACCCCCATGTGCAAGATGCAAGTTGGTAACATGCATAACTGCACAACAGTCACGGCAATGGATTATGGACGGACAGATGGATGGGTTAGGCAGAGTTGGACTGACGGATCTGAACATGCGATGCTCTGAGCCGGCTGCACTGCACATGCATGCGTGACACTATGAATCTATGACAGCATGATCCGTGCTAAGATCTTCATGGCAAAGAGAGAGGAAAAAGAAATTTGGCTGGCCTTTGCTTGGTTTAGACGATTAGTAGACGTCAAGGAGACTCATGCTGGAAATGACAACGACATAATAGGGTCATTTGTACAGATTGGAGTTGGCTGGATGTTGGACTAGTAGTTGGCTTTTCGTGTTTATTCTCCCTTTTTTTTCACCTGACTTAGCATATGAGACGCGTATTCGTACATTTATATGGTGATTGTTCTTAATTAGGAGAGGTCGGAAGTTATGCTCCCTTCGTTTTTTTTAATAACTGATCATTTTCTTTTGCTTTCTCATTTATACTTTGACTATTACTTACCCTTAAATTGGTAAACCAGAGTACACATATTTATGTTCACATATAGGACATACCTCACTTTAGTAACATGACACCAATTTTTTAGTGTATGTAATATTTTTTAAAAGTTCCAAAATGAATATTGTCTAGTGCCAGCTATTATAAAACGGACCGAGTTAGTTTCTTTGGATTTTGTAAACAAAGTTAGAGTAAAAAAAAAATTCTCATGGTGAAATTAAATTACGTTGTTATATGGCATGGTTAATCTCATCTCGAGATTCGTGCAGGGACAAGGCCCCGTGGTGCCCAAATTCGGATCGTGGGACGCCGAGAACATCGGCTACACCGTCTTCTTCGACAAGGTGCGCGAGAACAAAACCGCGCCCACGCCGGCGACGGCGGCGCCGGCGACGCACGACGACGACTACGAGTTCGATCCCTACGAGCACTACGAGAACCTGAGCAGGAAAGCGGCGTCGCGCCCGCCGAGCTCGCACGGCCACGGGCACGGCCACGCGCCGCCGCCGGCGCACCACCACCACCACCACCGGGCGCCGACGCCGCCGCAGCAGCAGCAGCATCACCACCACTACCCGGCGTCGCAGCGTAGCGGCAATGGCTACCACCGGAGGAGCGGCAGCAACGGCAGCAGCGCGGCGTCCGAGGCCAGCAGCCGCGGCAGCAAGTTCTCGCCGCCCAAGCCGTACCAGCCGCGGTACAGCAGCAACAGCAACAGCGGCGGCGGCGGCGGCGGCTGCTACGGGTACGGCGGCCCCGGCGCCGGCGCGTACGCGGCGCCGCCGCAGATGCATCACCACCACCACCAGCAGCAGCACGCCGCGCAGCCGAGGGTGGCCGCGTCGCCGCCGAGCCACGCGCTGCCGCAGGTGAGCCGCGCCGCGAAGGCGGCATCGGCCGTGCCCAAGTTCGGCGTGTGGGACGAGCAGAACGCGGCGGCGGCGGGGCAGGGCTTCACGGTGCAGTTCGAGAAGGTGAAGCGGCACCGGGAGGTTGCGAAGGCCGCCGCCGCCGCCGGGCCGGACGTCACGCCGCGCATGTCGCCGGCGCAGGCGGCGCCGGCGCGGCATCCTCGGAGAAAAGCCGAGAAGAGGTCCTTCTTATCAAAGGCACGTAACTTTAGTTAGTTAATTGATTATTATCTAATTTAATAATTCATTTGCAACTTTAGTTAATTAATTATTTAATTATGTAATTCATTTGCTTCTTCGAGTTCAATTTTTTTTAAAAAAAATTGCATGCTTTGTGAATTGCAGGTGTACAGGTGCATGTTCCCAAGGGTGAGGGAGTGAGGCAGAAGCTGGATTTGTATTATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006990