BGIOSGA007000

From RiceWiki
Revision as of 02:49, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007000| Description = Proline rich extension-like receptor kinase-1| Definition = Oryza sativa Indica Group BGIOSGA007000, complete gene.| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA007000

Description

Proline rich extension-like receptor kinase-1

Definition

Oryza sativa Indica Group BGIOSGA007000, complete gene.

LocusTag

OJ1115_B01.27

Ensembl Transcript ID

BGIOSGA007000-TA

Ensembl Protein ID

BGIOSGA007000-PA

Length

8562

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:5626927..5635488

Sequence Coding Region

5635454..5635488,5634617..5634776),complement(5627715..5627977,5626927..5627602

Genome Context

<gbrowseImage1> name=IndicaChromosome02:5626927..5635488 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:5626927..5635488 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGTGGGCTTCCTGCTGCAAGGGGGTGGACGGGGTTCTACCTGGCCGGAGGAAGAAGAAGAAGGAGACGACATGGCGGATCTTCTCGCTGAAGGAGCTACAGTCAGCGACGAACAATTTCAACTATGACAACAAGCTTGGTGAGGGTGGGTTTGGCAGCGTCTACTGGGGCCAGCTCTGGGATGGATCACAGATTGCGGTGAAAAGGCTCAAGAGTTGGAGCAACAAAGCTGAAACTGAATTTGCAATTGAGGTGGAGGTTTTGGCGACAGTGAGACACAAGAGCCTGTTGAGCTTACGTGGCTATTGTGCCGAAGGCCAAGAACGCCTGATAGTCTACGATTATATGCCAAACCTGAGCTTGCACTCCCACCTTCATGGACAGCATGCAGCTGAATGCCATCTTGGTTGGGAACGAAGAATGAAGATCGCTATTGATTCTGCAGAAGGGATTGCATATCTTCATCACCAAGCGACACCACATATCATTCATCGGGATATCAAGTCAAGCAATGTTCTGTTGGACAAGAATTTCCAAGCACGGGTTGCCGATTTTGGTTTTGCAAAGCTCATTCCAGATGGTGCAACCCATGTCACTACAAAGGTGAAGGGTACACTCGGTTATCTTGCACCGGAATACGCCATGCTTGGGAAGGCCTCTGAAAGCTGTGATGTCTTCAGCTTTGGAGTACTGCTGCTAGAGCTTGCCAGTGGAAAGAGGCCAGTTGAGAAGCTAAACCCCACTACGAAGCTAACTATCACGGAGTGGGCACTTCCACTTGCCCGTGACAAAAAGTTCAAGGAAATTGCTGATCCAAAGCTCAAGGATGTCTTCGTCGAGGCTGAACTGAAGCGAATGGTGCTTGTTGGGCTTGCATGCAGTCAGAACAAACAGGAACAGAGGCCGATAATGTCTGAAGTCGTTGAGCTGCTCAAGGGAGAATCTGCTGAGAAGCTTTCCAACTTGGAGAATGATGAGATGTTCAAGCCTGATCTGACCAGCTCCTTCCAGGACTCATCTCATTCGTCTCATCCTGATAGTTCAGACTGCATCACAGAAGAGAAGAACTCAAAAGCAGATACAATAGACGAGGCAGTTGATTCAAGTGAGACAGTACCTTCAGCTAGGTAG</cdnaseq>

Protein Sequence

<aaseq>MGWASCCKGVDGVLPGRRKKKKETTWRIFSLKELQSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKSWSNKAETEFAIEVEVLATVRHKSLLSLRGYCAEGQERLIVYDYMPNLSLHSHLHGQHAAECHLGWERRMKIAIDSAEGIAYLHHQATPHIIHRDIKSSNVLLDKNFQARVADFGFAKLIPDGATHVTTKVKGTLGYLAPEYAMLGKASESCDVFSFGVLLLELASGKRPVEKLNPTTKLTITEWALPLARDKKFKEIADPKLKDVFVEAELKRMVLVGLACSQNKQEQRPIMSEVVELLKGESAEKLSNLENDEMFKPDLTSSFQDSSHSSHPDSSDCITEEKNSKADTIDEAVDSSETVPSAR</aaseq>

Gene Sequence

<dnaseqindica>1..35#713..872#7512..7774#7887..8562#ATGGGGTGGGCTTCCTGCTGCAAGGGGGTGGACGGGTGAGTGCATATCTGGCGATTTGAGGATTGATTTGTGTGTGCTGTTTGCCTGTTTGGTGTGTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGAGAGGGGAGATTTGCTCATTTGGGTGGGTTATGACTTACGAGGGTGGGCGTGGTTTTGACTTGTTGGGTGGAATCGTCGGTAAACATTTGCAATTTTGTTTGTGATTAGTTCTGTTGGTGGATTCGATGGGTTTGCTCAAAACAGATTACTCGATTGATTAGCTAAGAAGAACTTTTTTTTTCTGGGGAGAATTTTTTCTGCTGGGAGCTGAGAAGTGTCTTGAAGCAGAAAATGGTTTTTGTTTGGGGAAATGGTGAGTTGCTGATCAAGTTTTGTGGTTTTGTGTGTGATTTGCTGATTAATCATGCGAGCATACAACACCGCAACATTCACCTGTTTTCATTGGATGGATGAACCAAATGATGCGTGGAATTTTCTCTGCTTGTATTGGGGAATTTTTCTGTTCGCTCTCGGATTGCAGTTGTTGGTCAGCAAGCTGAAATAGAATGACATAGTGGAAACTTATATCTAATTAATCCGTTAAAAATGTGCCAATTCTTTTTTTTGGGAAGAAGAGTCCGTACTTGAGAGTTTGAAGAGAAATGAAGCTCGTTTGTTGATCTGTTTGCTTGTTCTATACTCAGGGTTCTACCTGGCCGGAGGAAGAAGAAGAAGGAGACGACATGGCGGATCTTCTCGCTGAAGGAGCTACAGTCAGCGACGAACAATTTCAACTATGACAACAAGCTTGGTGAGGGTGGGTTTGGCAGCGTCTACTGGGGCCAGCTCTGGGATGGATCACAGGTGAGGTGTTCCTCTTTCAATCTTGAAAAAGAAAAAAAGAACAGGAAGAAATCTGAGAATCATGCAGTCCACACTGCACAAACTTTAGTTTGTTGTCTTTTTTTTTTTTCTAATTGATTAGAAAAATGGCAAAGCATTGGAGGGACCCAGTGATGTTGATGATTGTTGTTTAACTGACTTCCACTTCTAGCGTTGTTCATGGTCTAGTGGTAACCTTGTAATTTTTTCCTGCTATATCAATAGAAACTTTTTTGTCTTGTGTAGGTCGTCTTGAAAAAAAAAAGTCTAGTGGTATTAATTAGCAGTATAAAATGGTTGCCGTTTTTTAAAAGCTACCTTCAGATATTCTTTGAACATGATGGCCATCCAAACTGGACCTGCGTGCGGTTTAAGGCCGTGTCTAATGGGGATTTGGTCTGAGTAGACAACTGACTTATTCTTAGCTTCAGTTATCAATTTTTTTCGCTTATACCAATAGTCTTGTCAAGGATTGCATGATTACAAGCTAGAAAAAATCATAATTGGAAGGTATGAACACAAAAGAAAGCATACAGCCGGAATATGAGGCTATTGAAAATCACATTGTCTTCACAAAGACATATGACTATTGTGCTTCTCTTCAGTGTATTTGTCCCACCTAGTCTACTAGGAGCCAGAAAAAATAAGTAGCATGCTGATAGTGATATTTGGGTGAAAGATGAGGCAAGATTTTGTCCTGTAACGTGTAAAATACTTGATAGCTATAGTCTTTTTTATGGATTAATCTTGTTTACGTGATTAAACACATGAAAGAAAAATATACTAAATACTATTATAATGATAGTGTTAGTAACAGAATCCTTACTATTATTGAGAGGATGGCGCTAGGAGAGTTGGGACAATTTTCTGTTTATTTCTCACAAATGCCATACCATCCGGGGGGTTGGGATACATATTTACAGCTGGCTTGCTAATCTAAAAAGTGAAAGGAGATGCTGTCCTAAGGGCACCCACAATGGTTATCTATAGGCTCTCTACAAGAGATCCATGTCAGCATATTTTCCTACTTGGAATGTATTAAATGAAGAGAGAGAGCAAAGCTATCTACTAACTAAGAGATAGTCTATAGAGAAAAACGAGGCAATGCATGAGAGAGCTATAGATACCAATGTAGACATACTATTAAGGTGGTTTACTATTAATCGAGTCTATTGCTGAGATGTACATGTTTTATAGATAGCACCTTACTTTACCATTGCGGGTGCTCTAACAGGCATCCCAAACTGAAAGATGCTAATCCTGTCCTAAAAGCTGAAAAGCAAAAAGAACACAAAACCAATCAGCACAAGAAGATCAACAGCGCAAGACTTGTTTCATCATTCTCCTCCTAAGTCTTGTGCGTCGTCTTGTGGGAAAGTTGGGCCATCCCGATCCTAGAACAAAGCTCAAGGAACTTGATCCTCCTAAGGGGCTTGGTGAGCAGGTCCGCAAGCTAGTCCTTGGTGTGGTGTTGATGTAGCTCGCCTTGATGCTTCCTTCCTCCAAACAGCCTCGGATGAAGTGGTACCTCACCCGGATGTGCTTGCTCCGTTCGTGAAAAATGGGGTTCTTTGCTAGGGCCAGAGCGAACTTGCTGTCCACCCTAAGCTCCACCGCTCCAGTGTCTCTGCAGAAGAGATCACCAAGCAGTCGCGCAAGCCAGAGCGAGCGGGTCGAAGCGCTGGAGGCCACTATGTACTCGCTTCGTAGCTGGACAGGGTCACCACCTGCTGCTTGACCGAATGCCAGTTAACGAGGCACTTGCCGAGGAAGAGGAGACTCTCGCTTGTGCTCTTGCTGGTGTCGATGTCGCCGGCGTGGTCGCTGTCGATGTCACCGGCATGGTCGCTGTTGCTATACCCGACGAAGTGTGCCTTTCTAGGACACCTCGGGTAGTAGAGACCGTGGTCGAGAGTCCCCGCAACGTAGCGGATGATTCTCTTCACAGCCTGCTAGTGCTCCATCGTCGGTCGCTGCATGAACCGACTAACGTAGCCGATGAAGACACCCATACTGCATAGAGTCCACCTCCTCTGTCATGCTGTCGCGGCTCAGCTTCAGTCTCTCCTCCATCGGAGTAAGAGCTGGGTTGCAATCGGTGAGCCAGCCAGCTCAACAATGCGCTTGGCGTAGGCGGTCTATCGAAACGTGATCCCGGAGTCGTCCTGGTGCACCTCGATCCCTAGGTAGAAGAAGAGAGGCCCTAGGTCACTCATCTGGAAGGTGGCCTTCATCTCTTCCTTGAACGCCGCCACCTCCGCATCCTTGGTGCCGGTAATTACCAAGTTGTCGACGTAGACACCCACCAGCAGGACATTTCCTCCATTGCCCTGCCGGTAGATGGCTGCCTCGTGCGGGCTTTGCTCGAAGCCCATCCCCTTGAGCGTGGAATCCAACTTGGCATTCCACGCCCTCGGTGCCTGCCGCAAGCCATAGAGAGCCATGTGCAGGAGTAGCACCTTGCCCTCCTTGTCGGGGATCGCAAATCCTGGCGGCTGGTGTACGTAGACCTCCTCCTTCAAGTCGTCATTCAGAAACGCCGACTTGACGTCCATGTGATGAACGCACCAGCTTTCCTGAGCAGCCAGCGCAAGGAGGAGCACCTTGCCCTCCTTGCCGGGGATCGCACCACGGGGGTGAAGGCATCCCCTCCTGCTACACGAAACCGCGTGCCACCAAGCGAGCCTTGTGCACCCACTTAAGGGTGATCGCGCGGTGACCACGAGGGAGGTTAACAAGCTCCTAGGTGCGGTTTTCCTCAACCGCGTCCATCTCCGACTACATCACGACACGCTATGCTGCGTGTCTCTCGGCCTCTGCGAAAGACTTAGGCTCCCGTCGTACGGTACCGCAACGGCTCGCTGTCGTGGTATGCGTCGATGCGCTCCTCGTCGTGAGAGAGCGGAGTAGCGAACTCCACCGGGCTGTGCTTGACACAACCTGGCGTCGGAGTGGATGTGCCCGGAGGGGTGGCTGTTGGTGCTGGAGTGCGTGGGGTCGCCGGCTGTGATGGTGTCAGCGAAGAACTCATTGCAGCTGAAGTCGTAGCTCGAGAGCGTGTCGCTGCTGGAGTCGGTGGAGGCTCGGGGGCTGGGTAGGCACGCTCAGTGAATAAGAGCTACCTACTCCCCCAGCTCCCTCGAAGTGGACGTACTCACCAGTGAAGTCGTACGTTGGAGTCGAGCCATCGTCCACCGCCTTGTCCCATGCCCACCCTCGTCCTTCGTCGAACACTACGTCACACGCCGTGCGCATACGCTGTGTCTCTGGGTCGAGAATACGGTAGGCCTTCGAGCCCTCTGCTTAGCCGATGAACAGCCCTGGGGTGCTCCTGTCGTCGAGCTTGCCGATGTGGCCGATCTCCTTGGTGAACGTGAGGCAGCCGAAAAACTGCAGGTGGGAGACCGCCGGCTTGCGCCCATGCCAAGCCTCGTACGGGCCTTGGTAGTCGAGCGGCTGAGGATGTAGACAGCCGTCACCACCGCCTCTCCCCAGAAAACGGCCGGCATCCCCCTCTACTTGAGGAGTGCTCGAGCCATCCCTACAACCGTCTGGTTGCGCCGCTTGACGACGCCGTACTGCTGTGGGCTGTACGGCGCGAAGTAGTGGTGCTGAATGCCCTCATCAGCGCAGTACGATGCGAATTCAGCCGCCGTGAATTCGCCGCCGCAGTCCGCCTCCGCAGCAGCCTGCGCGCGCCTAATGGCGTCCGCAACCTCTCCCTTGCTGCCGAGAACCATCACCCACATGAAGCGGGAGAGGTCGTCGACGAGCAGCATGAAGTAACGTCGTCCTCCTGGTGTGGCCAGTGTCACTGGGCCACACAAGTCCCCGTGCACGAGCTCGAGCCGCTCCTTGGCTCGGAAGCTTATTTGCTGGGGAAAGGGGAGCCGCCTCTGCTTCGTTAACACGCAGACGTCGCAGAGCTGCTTCACGTGGTCAAGGCACGGCAGGCCTCGCACCATCTCCTTGGCACTGAGCCGCTTCAGGGCCTCGAAGTGGAGGCAGGCCGGTTGTGCCACCTGCACGTTGAAGACGTAGAGTCGATTGGTGCCTTAGGTTACCTTGGCAAGAAGGCAACGACGGCAATCCCAAATCCTCATGACTTCGTGCTCGACCAACAAGCATGAATCTTTCTCATCCAGCTGTCCCACGCTGATGATAGAGTTCCTCAAAGCGGGGATGTAGTAGACTCCGGTGAGCACAGGGATTTGGCGGTGAAGGTGATGGAGCCGACCCCCAAACTTGACGGAACCTCAGATGCTGGAGTCAAGCTTGATGAAGAACTCCCGTCGGTCAGTCATGTGATAGGTGGTGCCGGTATCGAGGTACCACTCATCAGTCTTGTCGTTGCTGGAGCCATCGCCGAGGAAGGCACGTACCTTCGGCTCATCAAGTTGGAGGAAAGCCGCTGCGGCCGGTGCCGCTGGAGATAGCTCGATGCTTGCGTGTGCCAGGAGCAGAGCCGACTCTTCCTCCTCCTCCACCTGTGCGACGTTGACCTGGCCGTGTCGTGGCTATCGGCAGTCTTTGGCCCAATGGCCAAACTTGCCATAGTTGCGGCAGGCGTCATCTCGCGCCGGCCTAGGCGCCTCCGCGGGCGCCACCCTGGGTGCGTCCTCGTAGGACGCGTCCCTTGCCGTGCTTGCGGCCTGTTGAGGAAGAGAACTCCCTCTTCTTCCCGTCACCCTGGCAGGCCTCCCACTGCTCTCGAGTGAGATGAAGCTTCCCGCCAATGGTGATAAGCCTCGAGAGAGGCTGTGGCTCGTCGCTGTCGACGACTCGCCTCCTTGATCGACATCGTGGAGAGGTCCAACAGAGACTCGATCGAGCGAGCAATCTGCTTGTACTTCTCTGGGATGCAGCGGAAGAGCTTCTTGACGGCTCTCTCCTCATCGTAGGTGTCGTCGCCATACTACACCAACTTCTACAGCAGAGTGTTGAGACGGAGGGCAAAGTCATCAACATCCTCACCTGGCTTGAAGGCCAGGTTCTCCCACTCCTTGCGAAGTGCCTGCAATGTGGACTTGCGAGCGCGGTCGCTGCCGATGCGTGCCGCAGCGATGGCGTCCCAGGCCTCCTTGGCAGTCCGCTTCTGGGCGCCCGTTGATCCTCGTCATAGTTGACGTCGTCGTGCCGAACTGGCTCCTACATGTGTCGCACCTGGAGCCTTATCCTCATCACCACGGCCCACTCGACGTAGTTGGTCTTGGTGAAGGTAGGGTTTAGGCCACACACCGCCAGGGGCCGACTTCCCTGATGACGGCCTAAATCCTGTGGTGACCATGGTACCGGTCCGGTGAGGGAGAGCCATGCCACCTGCAACGGCTGCGATCTCCGTCGACCCAACCGTTGCCGCCGGGGGGTCCGCCGGCGCGTCCACGCCCGTCTGGGCTGCCGCCGCGTCGCCCGTCTGGGCTGCCGCCGCCACATGCAATCCCGCTAGTCTAAGCTGCCGCCATTACGCTCGTGGGGTTGCGCAGCTGCCCACTGCTCCGCCCGCTCACGAGCTGCCTCCCTCGTCAGCTCATCATCGGAGCTGCCGTAGGCGGAGACAGAGCTGTTGGTGCTACTGTCGTGCCGCCGCCGCCGCTTCCACTTCCGCCCTTGCCGTTGCCAATTTTGCTGCCGCCAGCCTTGACGCCCTCGCTGCCGTCGCAGCGGTCTCTACCACCACTCGCTCGCGTTCCTCTGCCGCGGCGAACTCGGCCTCCTGCCGGAGCCGCGCGCTCGAGGCGACCAAGCGCTGAGACTGTCCTGCGGACATGGCACGCCACTAGGGGCTGCTGCGTGGGGAAGAGACTGCCTTTGAGGAGCTGCTGCTCGTCAGCGCAGGGGAAGAGGGATAAGTAGGAACAGCCGGTGTTCCTGCTGCCGACTGAGGACAGAGGGGAGCTCAAGAAGGAGAGAGTTGGGGCAATTTTCTGTTTATTTCTCACAAGTGCCATACCATCACGCAGGGGAGGGGGGTTGGGATATATATTTATAGCTGGCTTGCTACTCTAAAAAGTAAAAGTGAAAGGAGATGCTGTCATAAAAGAAAGATGCACTGAAAAGCAAAAAGAACACAAAGACCAATTAGCACAAGAAGACCAACAGCGTAAGACTTATTCCATCAGACAGTTGCACATTTATTATGAAGATGATGAAACTGTTCTACTTTGGTACTTGTTAGTTTGTTGCATGGTGATATAACCCCCAAACTGCTACATCCCGGTGAGTTGTGTTTCATTTTGGGTTGAAAAAAAAATACGGGCCTATTCAGATTGTAGCCAAAATTTTAGCAAGATGGCAATGTTGCCAAAATTTAAGATGGCAATATTGCTAAAATTTTGGCAGGATTTCTTATGTATTTACCAAATTTGACAACAAACTAAACATAGATATTTTTTTGGCAGCTTTACCAAAAAAATGGTATGGTTGAAAATAGCATCAATCTGAACAGCCCCTACAATATCAAATTCAAACTATCGTTTTGACAAGTATGTTTTTGAACATCATTTCATAAATCATAAGTATTATGTTGGAACTATTTACCTTCTACTGTTTAATCCAAAATCAGGAAAAAGTAGTTCACTTTAACCAGAACCTAACGCTTCTTCTGTTAACTACATGGGACAGATTGCGGTGAAAAGGCTCAAGAGTTGGAGCAACAAAGCTGAAACTGAATTTGCAATTGAGGTGGAGGTTTTGGCGACAGTGAGACACAAGAGCCTGTTGAGCTTACGTGGCTATTGTGCCGAAGGCCAAGAACGCCTGATAGTCTACGATTATATGCCAAACCTGAGCTTGCACTCCCACCTTCATGGACAGCATGCAGCTGAATGCCATCTTGGTTGGGAACGAAGAATGAAGATCGCTATTGATTCTGCAGAAGGGATTGCGTAAGCATGTTTTACATCCTTATGAAATATTCATTATGCTGTAACAGTATGACAACTTTCAGTACATGCAGAAGAAGTAATCTTACATCTGAAATCTCTCTCTACCATGCAGATATCTTCATCACCAAGCGACACCACATATCATTCATCGGGATATCAAGTCAAGCAATGTTCTGTTGGACAAGAATTTCCAAGCACGGGTTGCCGATTTTGGTTTTGCAAAGCTCATTCCAGATGGTGCAACCCATGTCACTACAAAGGTGAAGGGTACACTCGGTTATCTTGCACCGGAATACGCCATGCTTGGGAAGGCCTCTGAAAGCTGTGATGTCTTCAGCTTTGGAGTACTGCTGCTAGAGCTTGCCAGTGGAAAGAGGCCAGTTGAGAAGCTAAACCCCACTACGAAGCTAACTATCACGGAGTGGGCACTTCCACTTGCCCGTGACAAAAAGTTCAAGGAAATTGCTGATCCAAAGCTCAAGGATGTCTTCGTCGAGGCTGAACTGAAGCGAATGGTGCTTGTTGGGCTTGCATGCAGTCAGAACAAACAGGAACAGAGGCCGATAATGTCTGAAGTCGTTGAGCTGCTCAAGGGAGAATCTGCTGAGAAGCTTTCCAACTTGGAGAATGATGAGATGTTCAAGCCTGATCTGACCAGCTCCTTCCAGGACTCATCTCATTCGTCTCATCCTGATAGTTCAGACTGCATCACAGAAGAGAAGAACTCAAAAGCAGATACAATAGACGAGGCAGTTGATTCAAGTGAGACAGTACCTTCAGCTAGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007000