Os12g0560400

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Revision as of 10:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0560400| Description = Similar to DNA-directed RNA polymerase II 14.5 kDa polypeptide (EC 2.7.7.6) (RPB9) (RPB14.5)| Version = NM_001073549....")
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Gene Name

Os12g0560400

Description

Similar to DNA-directed RNA polymerase II 14.5 kDa polypeptide (EC 2.7.7.6) (RPB9) (RPB14.5)

Version

NM_001073549.1 GI:115489059 GeneID:4352511

Length

1046 bp

Definition

Oryza sativa Japonica Group Os12g0560400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23150736..23151781

Sequence Coding Region

23150738..23150812,23151177..23151335,23151434..23151514

Expression

GEO Profiles:Os12g0560400

Genome Context

<gbrowseImage1> name=NC_008405:23150736..23151781 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23150736..23151781 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aacaacatactgtatcccaaggaggatagggaccagaagattctgctctatgcctgcaggaactgtgaccaccaggaggttgcagacaacaactgcgtctaccggaatgtggtgcaccacagcgccggagagttcacccaagtgctccaggatgtcgccggcgatccgactctccctcgcaccaaggcggtccggtgcgcggtctgtggccacggcgaggccgtgttcttccaggccactgccagaggggaggaagggatgaccctgttcttcgtctgctgcaacccgagctgcggtcacagatggagagaatga</cdnaseq>

Protein Sequence

<aaseq>NNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAGE FTQVLQDVAGDPTLPRTKAVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRW RE</aaseq>

Gene Sequence

<dnaseqindica>3..77#442..600#699..779#gcaacaacatactgtatcccaaggaggatagggaccagaagattctgctctatgcctgcaggaactgtgaccaccaggttctttcttgttcatctcctctctctcttcccagcaagatttctctagttagatctctacaacaatattagaagatgagaaataccatagataagctagaagagctaaagagtgtgagcaattcaatctgaagctttaggagtagagtgctatttttgtactgaaagacaattggactgaagctttgagattgatttggatgaagataagctatatttggaagtagagatgaggttcatttaatgaaaaagattatgaaaagaatcttgctttacacccattttgttaggtgattattgtagaacaaaattttgtctttgttctaatgccatggcaaaatgcaatgctgaaaaattctcacaggaggttgcagacaacaactgcgtctaccggaatgtggtgcaccacagcgccggagagttcacccaagtgctccaggatgtcgccggcgatccgactctccctcgcaccaaggcggtccggtgcgcggtctgtggccacggcgaggccgtgttcttccaggtcagttgaagttgcaaacaatcgcagttaaatataattcagaagtcaagtgtgaaattatgaacaaaacctgatcatggcttcatattgttctgcaggccactgccagaggggaggaagggatgaccctgttcttcgtctgctgcaacccgagctgcggtcacagatggagagaatgagatcaatttgtagtcaaccaagtgaagaaagtcattgatgcaaatgatcagagagacatatgattttgatttcatccaagagacattccatagaagcatagactgattgtatgtttaaatttttaaaaacacattcaggcatcggtattttgtgtaacttctgaaggaaaaggatcaagactactaggataaaacattctgtggtctattccttccttataaacaaaggatgggatgaggacagttttcttggtgattcaattctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0560400, RefSeq:Os12g0560400