BGIOSGA007030

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Revision as of 02:50, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007030| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007030, complete gene.| tag = P0504A0...")
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Gene Name

BGIOSGA007030

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007030, complete gene.

LocusTag

P0504A05.26

Ensembl Transcript ID

BGIOSGA007030-TA

Ensembl Protein ID

BGIOSGA007030-PA

Length

5517

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:5004012..5009528

Sequence Coding Region

5009409..5009528,5009212..5009315),complement(5008222..5008297,5007982..5008040),complement(5007152..5007645
,5006912..5007072),complement(5006629..5006832,5005047..5005248),complement(5004012..5004601

Genome Context

<gbrowseImage1> name=IndicaChromosome02:5004012..5009528 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:5004012..5009528 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTATCTCTATCTCTCTTCTTGCAAAGAATCCTGCCTCCCCCGCCGACGCCTCCTCCCCTCCCCCGCGATCCCTCCGCCGCCGCCACCGCCGAATCCGGCGTCCCCAGCCGAGGCGAGATTTGGGGGCGCGCGATGAAGGAGAAGCGCGGGCTGGAAGCCGCGGCGGCCGGTGGCGACGGCCGCCCCGAGGCCAAGCGCGCGCGGCCTCCCGCACTGGCCAGTGTTATTGTTGAAGCATTAAAGGTGGATAGTCTGCAGAGGCTTTGCTCATCACTGGAACCAATTCTTCGTAGAGTGGTTAGTGAAGAAGTGGAGCGTGCGTTGGGCAGACTGGGTCCTGCAACAATAACTGGAAGGTCTTCCCCGAAGCGAATTGAAGGTCCTGATGGAAGAAATCTGCAACTCCAGTTCAGGACAAGACTGTCTCTTCCTCTTTTTACTGGAGGAAAAGTTGAAGGGGAGCAGGGAGCCGCAATTCATGTTGTTTTGCTTGATGCTGGAACTGGTTGTGTTGTATCTTCTGGACCCGAGTCATGTGCCAAACTTGACATTGTTGTTCTAGAAGGTGATTTCAACAATGAAGATGAGGAGGGATGGTCGGGAGAAGAGTTTGAAAGTCATGTAGTGAAAGAGCGTGAAGGAAAGCGCCCTCTTTTAACTGGTGATGTACAAGTCACACTAAAAGAAGGTGTTGGCACTGTAGGGGAGCTTACATTCACAGATAACTCTAGCTGGATAAGGAGTCGGAAGTTCCGACTTGGTTTGAAAATTTCCTCAGGATTTTGTGAGGGTATTCGCATCCGCGAGGCAAAAACTGAAGCTTTCATGGTTAAGGACCACAGAGGAGAATTGTATAAGAAGCACTACCCACCTGCGTTGAAAGATGAGGTCTGGAGGTTAGAAAAGATAGGGAAGGATGGATCTTTCCATAAGAGACTGAACAAAGCTGGAATTTCTACAGTTGAAGACTTCCTTAGGCTTGTGGTTCGAGATCCTCAGAAGTTGCGCAGTATCCTTGGAAGTGGTATGTCTAATAAGATGTGGGATATTCTTGTCGAACATGCAAAGACTTGTGTCTTAAGTGGAAAATATTACATATATTATTCAGACGAGAATAGATCTATTGGTGCTATTTTCAACAACATCTATGCATTCTGTGGGTTGATTTCTGGCGAGCAGTTCTATTCATCTGAAAGTCTTGATGATAGCCAAAAGCTCTTTGCTGATGCATTGGTTAAGAAGGCATATGATAATTGGATGTATGCCATTGAATATGATGGTAAAGCTCTCTTGAACTCTAAACCGAAGAAAAAGGCTGCACCCACTGGACAAGTTGAGACACATCCTCCTCTGAGTCAACCTGCTTCATACGAACAACGCATCTCATCAGCGAGCATGACAGGACCATCTCCAGCAGGTGGAAGTGGAACTGGAACTGATTCCATAGGGTATGATGGCAACCAAGCAGCTACACAGCCATCTCAACTTCAAAGTACATCTGCCAATGTCCCTGTGCCATACGATGACACCTTTTCATTTTTACCGCCTAGTATGTTGATGGGGTCTGATAATCAAGAAACCGGAAATGATGGCATGGGCCTGGAACTAGGCCAATTGCAACAAGCAATTTCACAGAGTCAGTCGATTCAGCCAGCAAATGTTGGCTATGATGATTGGACTCGAAGTCAAAACGGTCAGTTCGCTGATGACTTCACCGAAGATATTCGCATGAAAAGCCACCAAATGCTCGAGAGCGAAGACATGCAGCAGCTGCTCAGGGTCTTCAGCATGGGTGGAGCGTCTACCAGTTTGCAGGAAGACGCCTTCGGCTTCCCGACGTACATGCCATCTCCATTACCAAACCTTGGGTTCGAAGGTGAGCGCACCCGTTCATCTGGGAAAGCTGTTGTTGGGTGGCTCAAGATAAAGGCCGCCATGAGATGGGGGATTTTCGTCAGGAAGAAAGCTGCCGAAAGAAGGGCGCAGCTTGTTGAGCTGGATGATTAA</cdnaseq>

Protein Sequence

<aaseq>MVSLSLFLQRILPPPPTPPPLPRDPSAAATAESGVPSRGEIWGRAMKEKRGLEAAAAGGDGRPEAKRARPPALASVIVEALKVDSLQRLCSSLEPILRRVVSEEVERALGRLGPATITGRSSPKRIEGPDGRNLQLQFRTRLSLPLFTGGKVEGEQGAAIHVVLLDAGTGCVVSSGPESCAKLDIVVLEGDFNNEDEEGWSGEEFESHVVKEREGKRPLLTGDVQVTLKEGVGTVGELTFTDNSSWIRSRKFRLGLKISSGFCEGIRIREAKTEAFMVKDHRGELYKKHYPPALKDEVWRLEKIGKDGSFHKRLNKAGISTVEDFLRLVVRDPQKLRSILGSGMSNKMWDILVEHAKTCVLSGKYYIYYSDENRSIGAIFNNIYAFCGLISGEQFYSSESLDDSQKLFADALVKKAYDNWMYAIEYDGKALLNSKPKKKAAPTGQVETHPPLSQPASYEQRISSASMTGPSPAGGSGTGTDSIGYDGNQAATQPSQLQSTSANVPVPYDDTFSFLPPSMLMGSDNQETGNDGMGLELGQLQQAISQSQSIQPANVGYDDWTRSQNGQFADDFTEDIRMKSHQMLESEDMQQLLRVFSMGGASTSLQEDAFGFPTYMPSPLPNLGFEGERTRSSGKAVVGWLKIKAAMRWGIFVRKKAAERRAQLVELDD</aaseq>

Gene Sequence

<dnaseqindica>1..120#214..317#1232..1307#1489..1547#1884..2377#2457..2617#2697..2900#4281..4482#4928..5517#ATGGTATCTCTATCTCTCTTCTTGCAAAGAATCCTGCCTCCCCCGCCGACGCCTCCTCCCCTCCCCCGCGATCCCTCCGCCGCCGCCACCGCCGAATCCGGCGTCCCCAGCCGAGGCGAGGTGACCGGATCCCTCTTCGCTTTCCTTCACGCGTGTCAAATTGCGGAAAAGGGTGGCGGAATCTGACGCGGGTTGTGCTCGTTTCGGTTGCAGATTTGGGGGCGCGCGATGAAGGAGAAGCGCGGGCTGGAAGCCGCGGCGGCCGGTGGCGACGGCCGCCCCGAGGCCAAGCGCGCGCGGCCTCCCGCACTGGCCAGGTGAGGGGAAAATTTTCCGCGGTTTTGATCTTTCTTTCCGTTTCTAACCTCGAGATATGTTTGGGATGCTAGCCATAGTAGGGTTAGGGTTACTCCTGCAGTAGTGCTCGATCGAGAATTGGGAGTGGTTTGATTTAGTTTACTGCTTAGTTGCGGTGTGTAATTTGAGCATATGTAGACATGATGCTGCAAATTTCTTTTAGAAAGGTGGTGTGTGATCTGTCAGGGAAATGCCAGAAATCTTAGTAAGTTTGTACTCTGACCCATCAGTAGAATTTTTATCCTTCTGTGACAAATTTTGGTCTTAGGTCGGCACTCGGCACTGTTAGTGTTACTAATAGTGATACTGTTGACCAACCCCTATCTGTATGTTATAGGATGGATCCAAATGACTGTTTCAGGATTTGGGGTTGTACTACCTTTTAGAGATAGCTTTTCCCAACTGTTCTTTTCTGTGCTAATGTGCTTGTGCAGAAGTCAGCAGGTGTGAAACACATTTCCACTATCTAACAAAATAATCCTCATCTATGGTCTCTGCAATAATAGTGTTAGTATTTTTGTAACAACCAGCATCTGTGACTTATTTGCATTTGTTTTTAATCATGGATCTGTTCGCAAATGCTAGTACAGTAGATGGCTATGAAGTGTACTGATCTTTTGATGCTGATTTATGGTCTGTCAGTTGTCAAATTTGACTACCATGGTTTTAATGAATGTCTTTATAGGTTTTTTCTTTTATTTCTGCACATCATTTAATAATGGTCAATTACTTATTTCTGGTAGTTTTGATTACAGTTTTTTTCAAACATGTTTCCCTTGCGTGTTCATTACTGTAAAGCTCAACATGTGAGAAGGTGAATTGCGTCTTTTGTTCTTCTGTCATGATTTTTTCCGCTTCGCCTCTTTCTCTGCAGTGTTATTGTTGAAGCATTAAAGGTGGATAGTCTGCAGAGGCTTTGCTCATCACTGGAACCAATTCTTCGTAGAGTGGTAAGAACAAAGCAATTCTCTTTTAAGCGGAATTCTATTATCATGTCGCTTTACTCTCTTTTTTTTTGCATAGGTTTATTCTAGCATGCTACTGTCTACATTTATATGTTCCTTCACTACTGTTAATTATTTCTTGCACTTAGTTACATTCGCTTATATATATTCTCTGTATACATACTAGGTTAGTGAAGAAGTGGAGCGTGCGTTGGGCAGACTGGGTCCTGCAACAATAACTGGAAGGTACTCTGTTCTATCGCTTAGTTGACTATGAATTTATTGTTACACACACTTCCTTGTATAATATAATCCAGCAGTACATCGAACTAACCGTTGAAGTTATATTGCTGCAACTCCTACCATCAAATTGCATATGATACAAAATAACCTTTTGTTAGCTGTGCTTGTTCATGATGCTTGTTGCTAGTTCTTTTCACAAGTAACCTATTGCTTGTTTTAGGATATCTGGGCTAGATTATAACTGTTAAAATGAAGCACGTAAACCTACAACAACCTTTGGTAGAACCCACATTGATATATATATATATATATATTTTTGCTACTGTTGGAATAATTCAGGTCTTCCCCGAAGCGAATTGAAGGTCCTGATGGAAGAAATCTGCAACTCCAGTTCAGGACAAGACTGTCTCTTCCTCTTTTTACTGGAGGAAAAGTTGAAGGGGAGCAGGGAGCCGCAATTCATGTTGTTTTGCTTGATGCTGGAACTGGTTGTGTTGTATCTTCTGGACCCGAGTCATGTGCCAAACTTGACATTGTTGTTCTAGAAGGTGATTTCAACAATGAAGATGAGGAGGGATGGTCGGGAGAAGAGTTTGAAAGTCATGTAGTGAAAGAGCGTGAAGGAAAGCGCCCTCTTTTAACTGGTGATGTACAAGTCACACTAAAAGAAGGTGTTGGCACTGTAGGGGAGCTTACATTCACAGATAACTCTAGCTGGATAAGGAGTCGGAAGTTCCGACTTGGTTTGAAAATTTCCTCAGGATTTTGTGAGGGTATTCGCATCCGCGAGGCAAAAACTGAAGCTTTCATGGTTAAGGACCACAGAGGAGAATGTAAGTCCTCTGAAGCAACCATGATATGATACGATTCTTCATGATATTTCTATTAACTGTTTGAATTTCATTTGATTAGTGTATAAGAAGCACTACCCACCTGCGTTGAAAGATGAGGTCTGGAGGTTAGAAAAGATAGGGAAGGATGGATCTTTCCATAAGAGACTGAACAAAGCTGGAATTTCTACAGTTGAAGACTTCCTTAGGCTTGTGGTTCGAGATCCTCAGAAGTTGCGCAGTGTAAGATTATTTCCTATTCAGCATTTTTCTTCTTTTTTTCTTTTGTTTGAGTTCTAACATATATGCTATTCCGTCCCAGATCCTTGGAAGTGGTATGTCTAATAAGATGTGGGATATTCTTGTCGAACATGCAAAGACTTGTGTCTTAAGTGGAAAATATTACATATATTATTCAGACGAGAATAGATCTATTGGTGCTATTTTCAACAACATCTATGCATTCTGTGGGTTGATTTCTGGCGAGCAGTTCTATTCATCTGAAAGTCTTGATGATAGCCAAAAGGTTGGTTATAGTAGTGCACATTGATAACGATGCATATATTATGTTGGCTGTTTTTGGAAGACATAATTCATACCAAAATTTTCTTATGGAAACTTGTCTAACATGCCTGTCTACATGGCTATATCCAAGAATGAAACCACGGCAACCAAAACTACATGTGCCACCAATAAAATGACAATCGTACCCTTACGTGGTCATGACATATGTGATTTTGCTCTTCGTTCTCCATTCACATGCATAATTATAAGATGATACATTAGTTAGTTAATCTGTTTGACTCTGTAAGGCTTCTAGACTGATAAAGATTAAAGCATTTAACCATGCTAATGAATGCATGTGGACAGCAAACTGAATGAGCCATGGTCACAGAAACAAGTCAGGAAACCATAAAACTTTTGAAATTTTCATTTGCAATGCCATGGGATTTCGTTGGGATTTCTGCTAAACCACGCATTGTTGTAATCCTTTTTGTTGTGTGTGTATGTCGTGGTCCTTAAGTTGTCTTCTAATATCAAACTTGAATGGTATTTCCATTCATTTAAAGATGCACTCATGTAACACAAAAGCAATAAAAAATGCTTGGTTGCATAGCTTTCCTTTTGTCACATTTTATTCTGGACAGCGAACCCTTTTAGGCATGGCCACCAACATAGTGGCAGTGTTGTTTTGCTACGTGGCGTGGTTAAAGGTTTCATTTATTAATAAAAAGTGAGAACTGTTGGCGTATCAATGTTCATTTGCTACACCTGACTGGTTGCATACTAGCATGGCCGGACAGCCTAAAGGGTTATTTTTGTAAATAAGTTAGGGAGGGGTGATAATAATGTGTACTTTGAACTTTATATTATGTTAGTGCGTTGATGTAGGTCACGCACACACCCCTTCTCTTATATTGTAGCGCATGCTATGAACTGGAATAAGGTGTATCAAGTGTTTTGTGCTATGATGACCCAAGAATACTTGGGTTAGTTGCATTGGTGCCTCATCATGTGTCAGCTGTTCTTTTGTTCCTAAGGTCTTCTGACCTCCTGTCTGCCAATCGATTGTTGCAGTAAACTTCCTTTGGCACTTAGTGAATAGAGAGTGCCCCTGTAGTCCTGCCATTTTTATTTTTTAAAGGATGTGTCACTGTACAACTCCCCAAACATCAGTACAGAAGACATTGATAAATCATTAAGAATAACCACTATTTAATGAAATAAAACTCAGCCTTATATTCACTGTATTCTTCTGTGTAAAATCTAAGCTTGTAGCACTACACTTGCATGTTTAAGAATTAAGAGCTATGCTTTATTTATTCTCTGCATGAGCTTTTGAGAACTTTAAGCTATTCGTTTTTAATACCATATTGACTGATTGGGATGGTATTGTTCATTACAGCTCTTTGCTGATGCATTGGTTAAGAAGGCATATGATAATTGGATGTATGCCATTGAATATGATGGTAAAGCTCTCTTGAACTCTAAACCGAAGAAAAAGGCTGCACCCACTGGACAAGTTGAGACACATCCTCCTCTGAGTCAACCTGCTTCATACGAACAACGCATCTCATCAGCGAGCATGACAGGACCATCTCCAGCAGGTTAGAAGCATGAGTTATTATCTACCATTTCTATGTTAGTACCTCTTTGTTATTTTAGTTGACAGCTAGAAATATACTCTCTCCGTCCCCAAATATAAGACATCGAATAATTCAAATTTTGTCCCCGAATATAAGGGATTTTGTAGTACTACCTGTCCCATCCAATCACCCCTCATTTAATTTTCACCCAATCCTACCTTAACCACCCTCCCGCTCCCCAACTCCCCCTCATTTATTGAGGGGCATCATCGTCTTTTTCTCTCATCCTTAATCTCTCCAAAAGACTCTAGAATCCCTTATATTTGGGGATGGGGTGGTAGTAATTAATATGGTTGAAACCCTAAAACGTTGCTTACACTTTTAGAATAAACAGATGAACTATAGGGCGTGTGATTTGTCACTATAGAAGAGTCTCTGAACACCATGCTAGTTTCATTCATTTCAGGTGGAAGTGGAACTGGAACTGATTCCATAGGGTATGATGGCAACCAAGCAGCTACACAGCCATCTCAACTTCAAAGTACATCTGCCAATGTCCCTGTGCCATACGATGACACCTTTTCATTTTTACCGCCTAGTATGTTGATGGGGTCTGATAATCAAGAAACCGGAAATGATGGCATGGGCCTGGAACTAGGCCAATTGCAACAAGCAATTTCACAGAGTCAGTCGATTCAGCCAGCAAATGTTGGCTATGATGATTGGACTCGAAGTCAAAACGGTCAGTTCGCTGATGACTTCACCGAAGATATTCGCATGAAAAGCCACCAAATGCTCGAGAGCGAAGACATGCAGCAGCTGCTCAGGGTCTTCAGCATGGGTGGAGCGTCTACCAGTTTGCAGGAAGACGCCTTCGGCTTCCCGACGTACATGCCATCTCCATTACCAAACCTTGGGTTCGAAGGTGAGCGCACCCGTTCATCTGGGAAAGCTGTTGTTGGGTGGCTCAAGATAAAGGCCGCCATGAGATGGGGGATTTTCGTCAGGAAGAAAGCTGCCGAAAGAAGGGCGCAGCTTGTTGAGCTGGATGATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007030

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA007030&oldid=60582"