Os12g0560700

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Revision as of 10:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0560700| Description = Similar to PROLIFERA protein| Version = NM_001073552.1 GI:115489065 GeneID:4352514| Length = 5327 bp| Definition = ...")
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Gene Name

Os12g0560700

Description

Similar to PROLIFERA protein

Version

NM_001073552.1 GI:115489065 GeneID:4352514

Length

5327 bp

Definition

Oryza sativa Japonica Group Os12g0560700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23157784..23163110

Sequence Coding Region

23158183..23158287,23158401..23158622,23158709..23158873,23159041..23159245,23159345..23159517
,23159801..23159992,23160098..23160275,23160366..23160508,23160730..23160819
,23160933..23161055,23161455..23161632,23162277..23162506,23162621..23162680
,23162795..23162862,23162972..23163017

Expression

GEO Profiles:Os12g0560700

Genome Context

<gbrowseImage1> name=NC_008405:23157784..23163110 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23157784..23163110 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccaccgcgacgaagaccatcgacttcgccgcggagagagcgctcgccaaggacttcctcgccaacttcgccggcccgcgcggcgagcccaagtacctcaacatcctccaagatgtcgcgaaccggaagatccgcgcggtccagatcgagctggacgacctgttccactacaaggatgcggatgacgagttcttgcagagggtcacggagaacacgaagcgctacatcggcatattcgcggacgccatcgacgagctcatgccggagtccaccgaggcgtacgccgtcgacgaggacagggacatcttgatgacgcagcgcgtcgacgagggagccgatggcggcgcagacggcactgaccccctgcagaggatgccgccggagatcaggcggttctttgaggtgtacatcaaggctttctcaaaggtgactccactcaccattaggcaagtgaaggcatccaacatcgggcagcttgtcaaaatatctggaatcgtgactcgctgctcggatgtgaagcccttgatgcaagttgctgtttatacatgtgaagaatgtggttttgagatataccaggaagtgactgctagagtatttatgcctctctttgaatgcccatctcaaaggtgcaagctgaacaaagccaaagggaatctaatccttcaactgcgagcatcaaaatttctgaaatttcaagaggtgaaactccaagagttagcagaacatgtaccaaagggtcacatcccacgttctctgactgttcatcttagaggagagctgactagaaaggttgcacctggagatgtggttgagatgtcaggcattttcctccccatgccttactatggattccgagccatgcgtgcaggattggttgctgatacctacttggaatcaatgtctatcacccatttcaagaaaaaatatgaagaatatgaacttaaaggtgatgaacaagaacaaattgaccgtttggctgaggatggtgatatctacaataagttggcaaggtctttggcacctgaaatatttggacatgaagatgtcaagaaagcactgctgttgctacttgttggcgcacctcatcggaagcttacagatggcatgaagataagaggagacttgcacatatgcctgatgggagatcctggtgttgcaaagagtcaacttctgaagcatatcatcaatgttgctccaagaggagtgtataccacagggcgtggaagcagtggtgttggtcttactgctgccgtccagaaagatccagttacaaatgagtttgttcttgagggaggagcactggtactggcagatatgggtatttgtgcaatagatgagtttgacaagatggaagagtcagacaggacagcaatccatgaggtgatggagcagcagactgttagtattgcgaaggctggaatcaccacctccctcaatgcaagaacggcagttttggctgctgcaaatccagcatggggaaggtatgatatgaggaggaccccagctgaaaacatcaatctacctccagcacttctgtctcgttttgacctcctttggttgatcctggatcgcgcggacatggaaaccgatcttgaaatggcaagacatgttgttcatgtacatcaaaaccttgaatcaccagctctggggttcacaccacttgaaccaccagttcttagggcatacatatctactgcgagaagagttgttccttctgttcctcgagagcttgaggaatacattgcaactgcctattcgagcatccgccaagaggaagcaaaatcaaatgcaccacactcctacacaactatcaggacacttttgagcatactccggatttctattgccttggcaaggcttagattctcagaaaccgtcgctcagagcgatgtcgatgaagcgcttcggctgatgcagatgtcaaagtactccctatactcagatgaccgccagcggtctggattggacgcgatttctgacatatattccattctgagagatgaagctgcaagaactaacagcatggatgtcagatatgctcatgcccttaacttgatctccagaaagggttacagcgaggctcaactgaaggaatgcttggaggagtatgcttccctgaatgtttggcagatccaccccaacacctttgatatccatttcatcgacgcgtaa</cdnaseq>

Protein Sequence

<aaseq>MAATATKTIDFAAERALAKDFLANFAGPRGEPKYLNILQDVANR KIRAVQIELDDLFHYKDADDEFLQRVTENTKRYIGIFADAIDELMPESTEAYAVDEDR DILMTQRVDEGADGGADGTDPLQRMPPEIRRFFEVYIKAFSKVTPLTIRQVKASNIGQ LVKISGIVTRCSDVKPLMQVAVYTCEECGFEIYQEVTARVFMPLFECPSQRCKLNKAK GNLILQLRASKFLKFQEVKLQELAEHVPKGHIPRSLTVHLRGELTRKVAPGDVVEMSG IFLPMPYYGFRAMRAGLVADTYLESMSITHFKKKYEEYELKGDEQEQIDRLAEDGDIY NKLARSLAPEIFGHEDVKKALLLLLVGAPHRKLTDGMKIRGDLHICLMGDPGVAKSQL LKHIINVAPRGVYTTGRGSSGVGLTAAVQKDPVTNEFVLEGGALVLADMGICAIDEFD KMEESDRTAIHEVMEQQTVSIAKAGITTSLNARTAVLAAANPAWGRYDMRRTPAENIN LPPALLSRFDLLWLILDRADMETDLEMARHVVHVHQNLESPALGFTPLEPPVLRAYIS TARRVVPSVPRELEEYIATAYSSIRQEEAKSNAPHSYTTIRTLLSILRISIALARLRF SETVAQSDVDEALRLMQMSKYSLYSDDRQRSGLDAISDIYSILRDEAARTNSMDVRYA HALNLISRKGYSEAQLKECLEEYASLNVWQIHPNTFDIHFIDA</aaseq>

Gene Sequence

<dnaseqindica>4824..4928#4489..4710#4238..4402#3866..4070#3594..3766#3119..3310#2836..3013#2603..2745#2292..2381#2056..2178#1479..1656#605..834#431..490#249..316#94..139#gccatttcccccaacccctctgaatttccctccctttccctctcctcccctcctcctcctcccgcctccgccgccgccgccgccgactacgccatggccgccaccgcgacgaagaccatcgacttcgccgcggagagaggtacgcgacgcgcccccctcccctcccctccagaaccttccggaacatctcttcttggaaccttccagaacaaatcccaactcacgttgtgatttgttcgtctccgcagcgctcgccaaggacttcctcgccaacttcgccggcccgcgcggcgagcccaagtacctcaacatcctcgtaatgatctccacctcgcgttctaccgattgaggatctgaatttctttattttccaccgatttgttactgtaattactgaatttactgttcttttgttgtgtcccaactccagcaagatgtcgcgaaccggaagatccgcgcggtccagatcgagctggacgacctgttccacgtacggaatctctgaatcctccatctcctccagatctacaattattttgagatgcaaaaagtctgatattgtttttggggcgtggaattttttttttcttgtgtgtttgtgtagtacaaggatgcggatgacgagttcttgcagagggtcacggagaacacgaagcgctacatcggcatattcgcggacgccatcgacgagctcatgccggagtccaccgaggcgtacgccgtcgacgaggacagggacatcttgatgacgcagcgcgtcgacgagggagccgatggcggcgcagacggcactgaccccctgcagaggatgccgccggagatcaggcggttcttgtgagtgtgctgcctctgaatttctcatgaaaatgtgatttccctttttggagaatgaatagtagtagctgtgattagggatgcaagcgggcaatcctactacccgtataagaacccgcttaatagttcatttcgtacttgctagcacaaaaatttggaagaaaaaaatgaagtagaattatgataagcaggcaaaaaaaaaaaaactgtgcccgccccacttgtagaaggaaaatagtgtcgcgagagttacgaagttgtgcaaacagatttttagatggtcttggttggtgagattacataatttagatggtcctaggattgccatgtcccaccttgacctaggaactgaacagtgaacactacctaaaagatgctattgagcacagtttggtatgttaacaacagttggtgcatgttctgcaattatttgtgcttccatggattatgtgataatgtaatgtgacagattcttgaatgccaccggaacgtttgcccatcttatattgaaagctaaaattgtctgtgctcatgcattgcttattatttttgtccttaaaaaatcattgcttgtttttgtactatgattttgttggttttgtgttgagcttttatctgaataccaagtggttttgacattgcagtgaggtgtacatcaaggctttctcaaaggtgactccactcaccattaggcaagtgaaggcatccaacatcgggcagcttgtcaaaatatctggaatcgtgactcgctgctcggatgtgaagcccttgatgcaagttgctgtttatacatgtgaagaatgtggttttgagatataccaggtattcatctcttccaggttcctttttccataagtagttttgatgaagtgatgactatgtgttgactgtatcgattatttgcccccctcaaggattagcgctttaatgattttccactccactccatgtgttaatctttagcctataatcctagaccactttagcctataattcattggatactctactccatgtgtcaggcatattgtccttaacttttagcctatattcctagactagtttaacgtctaattcatcggatgctatttttcactttgtgctaaatttaattgagctgtggagctagtggttttcacttgctgagatatatttatatgtgccttctggaagaaaaattctagaatgactattaacattgtattgttctgaatttgacaggaagtgactgctagagtatttatgcctctctttgaatgcccatctcaaaggtgcaagctgaacaaagccaaagggaatctaatccttcaactgcgagcatcaaaatttctgaaatttcaagaggtaataacccttctccacaatctgtgaaagtttaccttcaacaggcaaaactattcttacttaggcatattccaaattgtactcaatcgtagaactgcaacactttcttgtaggtgaaactccaagagttagcagaacatgtaccaaagggtcacatcccacgttctctgactgttcatcttagaggagagctgactagaaaggtacatcaacttgcaactttccctttgcttttgttctctgtgttgctttgtgagtgggaccacaaaattgatgtttttccataggatccacctctgaatttgagaagaggctgctataagatttctggttttcatttactaaatatccattatcttaatgctgccacataagcaggaaatattcattaatggctccaagtactaaatgctgttattaccaggttgcacctggagatgtggttgagatgtcaggcattttcctccccatgccttactatggattccgagccatgcgtgcaggattggttgctgatacctacttggaatcaatgtctatcacccatttcaagaaaaaatatgaagagtaaaccatctcagcctagccatccagtctattcagcttgtctctcagcgccatttgacattacaaatttgttgcaaaaaatcattgcagatatgaacttaaaggtgatgaacaagaacaaattgaccgtttggctgaggatggtgatatctacaataagttggcaaggtctttggcacctgaaatatttggacatgaagatgtcaagaaagcactgctgttgctacttgttggcgcacctcatcggaagcttacagatggcatgaaggtatgcatgttgtgttgccaggacttgtgatcacttgtattcagtaataaaactttaatatctccaactgcttgtatacttaatgttaaccctcttaatgtgcagataagaggagacttgcacatatgcctgatgggagatcctggtgttgcaaagagtcaacttctgaagcatatcatcaatgttgctccaagaggagtgtataccacagggcgtggaagcagtggtgttggtcttactgctgccgtccagaaagatccagttacaaatgagtttgttcttgagggaggagcactggtacgattcagatcacactttacttctttttgctgctggttaactgtacaaaagtttggttgtatcaagtgtttatatgaaactatgttcaagtcctgacttgggatgttaagagaatatgtcaatgaaagttgctttgacatcaattaagatttttcatacttaagtttcactgatgcaaatattttgtttcactcatgcgaactgaagcattttatttgagagcatggcacagcctgtaatcctcaatggttaatctctattgcgaattcttgggtttcaggtactggcagatatgggtatttgtgcaatagatgagtttgacaagatggaagagtcagacaggacagcaatccatgaggtgatggagcagcagactgttagtattgcgaaggctggaatcaccacctccctcaatgcaagaacggcagttttggctgctgcaaatccagcatggtaagatttgatctcaacatttttcttcttgctagactctagaggataacaagaaagataccagagttgtaacaattgcaattgcttttaaccattcaggggaaggtatgatatgaggaggaccccagctgaaaacatcaatctacctccagcacttctgtctcgttttgacctcctttggttgatcctggatcgcgcggacatggaaaccgatcttgaaatggcaagacatgttgttcatgtacatcaaaaccttgaatcaccagctctggggttcacaccacttgaaccaccagttcttaggcaagtacactttccctagggtcttgttactttgtcctgattttatgtaaaaaaatgtgcattacaatttacaaatagctaaaagtttttccttgaaagcaatcttgtaaataggctgaactagaatattttaggagtttgtgttaacaatcttgatctgatcacagggcatacatatctactgcgagaagagttgttccttctgttcctcgagagcttgaggaatacattgcaactgcctattcgagcatccgccaagaggaagcaaaatcaaatgcaccacactcctacacaactatcaggacacttttgagcatactccggatttctattgtaagcaaacttcatactttgtcttttgttaactgcaagcatatgaatctcttctcacaaaacacaatggtacctgtttctttcaggccttggcaaggcttagattctcagaaaccgtcgctcagagcgatgtcgatgaagcgcttcggctgatgcagatgtcaaagtactccctatactcagatgaccgccagcggtctggattggacgcgatttctgacatatattccattctgagagatgaagctgcaagaactaacagcatggatgtcagatatgctcatgcccttaacttgatctccagaaaggtacagttcctgcatttcatacatcaatcagctggtgccattgctaaagctcaatgtggcctaaattctaacaaaagcaatcttcttctgcctgtatggatgtaacaaaacagggttacagcgaggctcaactgaaggaatgcttggaggagtatgcttccctgaatgtttggcagatccaccccaacacctttgatatccatttcatcgacgcgtaatgcaggaagaattgatcgatcgatctcctctccttcaaagttctaacatacccatgatgagctcatgatggaaaatctagagtttgaagctccaggaagttgtgaccatggctagggaagccattgatcaaggtctaacaaggctgtaaaagtactagggatcttagataaactataattttcaatgatgttattctgggtagatgtagcctgtgagaaatgtattagtagagggagccattgctatcattgtccaccttgtgagaagcattgtggttttttcagccatattcttgactcttgttcaacacttgatactgaagtgtatgtatcatgttgtgtttagttgctggcatttatgttctcagacagcagcgattaaaaaaaacagaaaatttc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0560700, RefSeq:Os12g0560700