Os12g0562000

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Revision as of 10:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0562000| Description = Hypothetical protein| Version = NM_001073557.1 GI:115489075 GeneID:4352521| Length = 2707 bp| Definition = Oryza sa...")
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Gene Name

Os12g0562000

Description

Hypothetical protein

Version

NM_001073557.1 GI:115489075 GeneID:4352521

Length

2707 bp

Definition

Oryza sativa Japonica Group Os12g0562000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23229062..23231768

Sequence Coding Region

23229262..23229515,23230529..23230615,23231560..23231572

Expression

GEO Profiles:Os12g0562000

Genome Context

<gbrowseImage1> name=NC_008405:23229062..23231768 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23229062..23231768 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggccggaggtaagcacttgccgccgccgttccggcctcttccctcactccctttgccatacgactgcctccttgggtgcgcgtctctcgggaacatgtttccccgtcaacgtcgtcgttccccgccaactagagcaccggcgcccctcctctccctcttctctgtgttcggctggaagaagaagcagaaggagagaggatacgggaggaagaagaagagaaaaagaaaagaaaagaatctccctgacagagtctattttattctggatggcaacatgtggcatttcgagcatcggataatcaggttgcctatctcggatttatttgcgttggagcaagagtccatttga</cdnaseq>

Protein Sequence

<aaseq>MSAGGKHLPPPFRPLPSLPLPYDCLLGCASLGNMFPRQRRRSPP TRAPAPLLSLFSVFGWKKKQKERGYGRKKKRKRKEKNLPDRVYFILDGNMWHFEHRII RLPISDLFALEQESI</aaseq>

Gene Sequence

<dnaseqindica>201..454#1468..1554#2499..2511#tccatccatccgagctctctctctctctctgtcttctctctaccatgaccggccaccaccattgccaccggccgatctcctcttccacagccctacatcccaaaaccttgcgccattagctcggcctcgatgaggtgaatccattttgcccctttcccccttctctccccctttgaatcaagccatcaccaccaccatccatgtcggccggaggtaagcacttgccgccgccgttccggcctcttccctcactccctttgccatacgactgcctccttgggtgcgcgtctctcgggaacatgtttccccgtcaacgtcgtcgttccccgccaactagagcaccggcgcccctcctctccctcttctctgtgttcggctggaagaagaagcagaaggagagaggatacgggaggaagaagaagagaaaaagaaaagaaaagaatctccctgacaggtgggcccatcaacagtagcctttcatacttttctagatttaattcaaatcccaatctttagaagcccatatctcctaaaccgtagatccgattccgatgaaacttggacctaaattcatctaaattcaaaagctacattttgatatcaaatttgctattttactatttgaaattccttaatgccatttgaatttatatttgactttcaaatatttcctttttacccaaaattactctttagccactaaacaaccaccgtttggaactttacgccttccatgaggacgttcgcatggtctactgacctcaacgtcgaactgttggttgtaaagttcgacaaaactcaaacctaaggtcgaagtgttgcttctgacaccttacgcctcaatgcgtataactgagcagagcttcactattccctcgacctcagctgtacaccgcacagttagcttttaagctctgtgtgatcctagccgctccgtcgccacccacggttgtcggagtaacacttccaccccgctaaacctacacaaacttcctatccctctagccgttatattgtctgttgacatcggctagacatcaaacctagtcatcatactacccaattctaatgacgactagcaaacacccaaatcccagccgatattcatcctacctcgatattggcttaatcaaatgaaactctagccagccagcctgctatccaaactccataccagccatttaccctccaactacctatagcttaaacatgaaatacgagccgatatgctatcctattttagcatcgactcgagaacaactaaaccctagccactattccaccaaagcctaatcttgatcccctctccaacctagcctccaaccccttagagcctacacataaaatactagctcaataacccatcaaggagatagttataccccaaacctagcctttctcgcgcttcatcgttttcttgctattttatggcatttattcaatttggttcttccttttctttaatagagtctattttattctggatggcaacatgtggcatttcgagcatcggataatcaggttgcctatctcggatttatttgcgttggagcaaggcaagttattattcctccccttgagcataattaccctatattctatatctcttttctatgcattagtcattcatgattttgaatgcataacctgaacatatagcaaaccagatatgctagcttttgcttagccctgcctagttagattatgcataaaatttaatgaacttagattgggacagtacggtagaaacggttgatttccgggtggctagtaatgttccaaccgacataagactgccaagtacatgtgaagaacatacgagtacgaccgcaatcctcgtatgggcatagacctagctgattaagttatctagcaaagatggtacctctgtatagtggttcttcttaagtcctcgcgcaggaggcaaatttatgccgcgaagggcaattgtgatatttaccgaggcgcaagtaaatatatgagatttattgacgtcaacttgtttgtgaaccctgattgcgatgacatggtgtcatacaatcagttctctctaaagaccccgggaacgccagaactcctctcgctgctgataacgttacgttcagagcacatggggattatagttcatggaacaggtaccactgatgttagtaaccaaaaagctttgccatgacaaggctaatgtgtttggcacgtcatggattgcgggtaaagcgtacatctactgcagtatgaatattctcaaaactattcgaatagccgtgctcgcggttatcgggcattgggactcacaatggcatcttggttagaaacttaattccaaactttattaaatattgttgcatttaaaacattacaggctttctccctctatattctttgctttctgcaagtaaacctagctctacacaaatattaccatttcatctattcattgttgattaatataatagcttgctgagtacgttgtactcacccttgcttcaacctcctttttcagagtccatttgatgttcttgccgaagtcaggagttcaatcacataagttaattcccttttaacttaatcttcaagtttaggttatttagatggtttaagtctatagtaaaacagcagagttaggtcattctaaagcttctgttgtaatagttagccacaatctcgtaaacaccctattactttatgtaataatatctccttcaaagct</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0562000, RefSeq:Os12g0562000