BGIOSGA007130

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Revision as of 02:51, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007130| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007130, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA007130

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007130, complete gene.

LocusTag

OSJNBA0050G13.20

Ensembl Transcript ID

BGIOSGA007130-TA

Ensembl Protein ID

BGIOSGA007130-PA

Length

7024

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:3229510..3236533

Sequence Coding Region

3236359..3236533,3234627..3235182),complement(3233838..3234322,3233489..3233627),complement(3233289..3233360
,3232562..3232633),complement(3232398..3232478,3231605..3231768),complement(3231239..3231459
,3230861..3230987),complement(3230435..3230497,3230116..3230302),complement(3229510..3229972

Genome Context

<gbrowseImage1> name=IndicaChromosome02:3229510..3236533 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:3229510..3236533 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTCATTACTGGCCGTCTCCGGCCAGCGGCCTCATCTGAGCGCCGACTTCGATGCCTCGACGTCGTCGGAGGTGGAAGGGGGACGCCCCCAGCCACGCGACGCGACGGGCCCCTGAGCGGCTGCGCTGGGTCCCCGAAGTCGCCGCGCGCGTCGTCGCCTTCGTCAGGTTCAGGTTTCATAAGCATCGATTGCGGCATTCCAGAGAAATCGTCCTATCAAGATCCCACATCAAGTATAATATATGTTTCGGACTATGGTTTCATCAGCACAGGAGCAAACCATAACATCTCCTCAGCATACATTAAACCATCACTGGCACAGCGCAATTACAATGTCCGATTCTTTCCAGATGGCACACGGAACTGCTACACCCTGAGGTCCTTGCAGGAGGGAAACAAGTACTTTGTTCGAGCTGTCTTCTACTATGCAAATTACGATAGCCTGAACAAGCTTCCTGTCTTTGATCTGTACCTGGGGGCAAACTACTGGCATGAGGTTAAGTTTAGTAATGCCGATGCAGTTAATTGGATGGACATCATAGTTGTGGCTCCTGCTGATTACCTGCAAGTCTGTTTGGTGAACAAAGGGACGGGAACTCCGTTTATATCTGGGCTTGATTTGAGGCCACTGAAGAGTACTCTTTACCCAGAGGCAAATACAACTCAATCTTTGGTGCTGATCAATTCCAATCGGTTCAACATGGGACCCACAGACAATTCAATAACCAGATACCCACTTGATCCCCACGACCGGCTTTGGTCAACATATGATACGATCCCAGACTGGACTGAGATATCTGCAACATCAGTAGTTCAGAATTACCTCACTGATGTCTATGATGTACCATCAGCTGTCATGCAAAGTGCAGCAACAGTTAATAGCTCGAGAATTAATTTCACTTGGGATCCATCTGACCCATCGGTGAACATCAGCTCCAAATACTTCTTTGTGCTCTACTTCTCCGAGTTACAGTCTGTACCGAGCAATGGGCTGAGACAGTTTGATATTATTGTCAATAACAATACATGGAACACACAACCTTATACTCCACCATTCCTATTTGCCGATTCCTTGTCTGGCACCGTACAGGGGCTGGCAAGTTATAGTGTCTCACTTGTTGCTACGAAAAATGCAACTCTTCCACCTATCCTCAATGCCATGGAGATGTACTTGGTGAAACCGCTAACTGAGTTTGCAACTGATCCTAGAGACGCTAGAGCCATGATGGAAGTCCAACAAAATTATGATGTGAAGAAAAACTGGATGGGCGATCCATGTGCTCCAAAAGCTTTTGCATGGGAAGGATTAAACTGTTCCTATCCTCCAGCTGATTCCTCTAAAATAACATCACTAAACTTGTCTTCCAGTGGGTTGGCTGGATCTATTGCTACTTATTTTGGAGATCTCAAATCACTCCAGTACCTGGATTTGTCACACAACAACTTGTCTGGACCAATTCCAAATTTTCTAGGGCAGCTTCCGTTACTAATGTTTCTGGACCTGTCCAGCAATGATCTCAGTGGACCAATTCCTTACAATCTTCTTCAAAAATCACAAAATGGTTCTTTGTCACTAAGGGTTGGTTATAATGCAAAACTATGTGGCAACGATACTGAATGCGGATCAGGTCAAAAGAAAATTAAAGGGTCACTTCTTTCTGCAATAATTATTACAATAGTTGCCACTGTTGCACTAATTGTTGTCTTATTTCTTCTTCTGCGCCGAATGCTCAAGGCAAAAGACAAGAGAAGAGCTGCTGGTCCTACATATGAATCAGCATTACTTGAGAACAGAGAATTCTCTTACAGAGAACTGAAGCATATTACGAATAACTTTAGCCAGCAGGTTGGTAAGGGTGGGTTTGGAGCTGTGTTCCTTGGTTACTTGGAAAATGGTAACCCAGTTGCTGTGAAAGTGCGATCCGAGTCATCTTCACAGGGGGGTAAAGAGTTTCTAGCTGAGGCCCAACATTTGACAAGGATTCATCACAAGAATTTGGTTTCCTTGATTGGTTATTGCAAGGACAAAAATCATTTGGCCCTTGTGTATGAGTACATGCCGGAAGGGAACCTTCAGGATCATCTGAGAGCTACTACTAATAAGCCACTCACTTGGGAGCAGCGTCTTCACATCGCCCTTGATGCTGCACAAGGATTGGAGTATCTGCATGTCGCGTGTAAGCCAGCACTGATTCACAGGGACGTGAAGAGTAGGAACATCCTCTTGACCACAAATCTTGGAGCTAAGATCGCTGATTTTGGACTGACCAAGGTATTCAGTGAATCGAGAACACATATGACCACTGAACCAGCTGGTACATTCGGCTACTTGGATCCTGAGTACTACCGCAATTATCATATCAGCGAGAAGAGCGACGTGTACAGCTTCGGTGTCGTCCTCCTGGAGCTGATCACAGGCCGCCCTCCCGTCATCCCCATCGACGAGAGCGTGAGCATCCACATTGGTGAGTTTGTGCATCAGAGCCTCGACCACGGCAGCATCGAGAGCATTGTGGATGCAAGGATGGGAGGAGGGGGAGGCTACGACATCAACTCGGTCTGGAAAGTCGCTGACTTGGCGCTGCATTGCAAGCGAGAGGTCTCCAGGGAGCGGCCTACGATGACAGAGGTGGTGGCACAGCTTAAGGAGAGCTTGGAGCTCGAGAGCCATGGCGATAGGAAGCACTTGGTGACTGGTGATGATGACGTGAGCGTGAGCAATCTTGGAGAGGAGACTGCACTTGAGGTAGAAGAGCAATCTGGGGAGATATCAAGAGTTTCTCCTGGGCCTGCAGTAAGATGA</cdnaseq>

Protein Sequence

<aaseq>MVITGRLRPAASSERRLRCLDVVGGGRGTPPATRRDGPLSGCAGSPKSPRASSPSSGSGFISIDCGIPEKSSYQDPTSSIIYVSDYGFISTGANHNISSAYIKPSLAQRNYNVRFFPDGTRNCYTLRSLQEGNKYFVRAVFYYANYDSLNKLPVFDLYLGANYWHEVKFSNADAVNWMDIIVVAPADYLQVCLVNKGTGTPFISGLDLRPLKSTLYPEANTTQSLVLINSNRFNMGPTDNSITRYPLDPHDRLWSTYDTIPDWTEISATSVVQNYLTDVYDVPSAVMQSAATVNSSRINFTWDPSDPSVNISSKYFFVLYFSELQSVPSNGLRQFDIIVNNNTWNTQPYTPPFLFADSLSGTVQGLASYSVSLVATKNATLPPILNAMEMYLVKPLTEFATDPRDARAMMEVQQNYDVKKNWMGDPCAPKAFAWEGLNCSYPPADSSKITSLNLSSSGLAGSIATYFGDLKSLQYLDLSHNNLSGPIPNFLGQLPLLMFLDLSSNDLSGPIPYNLLQKSQNGSLSLRVGYNAKLCGNDTECGSGQKKIKGSLLSAIIITIVATVALIVVLFLLLRRMLKAKDKRRAAGPTYESALLENREFSYRELKHITNNFSQQVGKGGFGAVFLGYLENGNPVAVKVRSESSSQGGKEFLAEAQHLTRIHHKNLVSLIGYCKDKNHLALVYEYMPEGNLQDHLRATTNKPLTWEQRLHIALDAAQGLEYLHVACKPALIHRDVKSRNILLTTNLGAKIADFGLTKVFSESRTHMTTEPAGTFGYLDPEYYRNYHISEKSDVYSFGVVLLELITGRPPVIPIDESVSIHIGEFVHQSLDHGSIESIVDARMGGGGGYDINSVWKVADLALHCKREVSRERPTMTEVVAQLKESLELESHGDRKHLVTGDDDVSVSNLGEETALEVEEQSGEISRVSPGPAVR</aaseq>

Gene Sequence

<dnaseqindica>1..175#1352..1907#2212..2696#2907..3045#3174..3245#3901..3972#4056..4136#4766..4929#5075..5295#5547..5673#6037..6099#6232..6418#6562..7024#ATGGTCATTACTGGCCGTCTCCGGCCAGCGGCCTCATCTGAGCGCCGACTTCGATGCCTCGACGTCGTCGGAGGTGGAAGGGGGACGCCCCCAGCCACGCGACGCGACGGGCCCCTGAGCGGCTGCGCTGGGTCCCCGAAGTCGCCGCGCGCGTCGTCGCCTTCGTCAGGTTCAGGTACGCAATTTCCGCACCTTGTGGATCGATATCGCCTGAACAATGTTGCTGGGGGAAGGCTCCAACTGCGCAGCTCACGTCGTTTCCTTTGGATTCAGAAGTTGTCGTGGACATGGATGTTGTTAAAGGATTATGAAATTTTTGGTAGAATTGCCAGGGTTCATCGCTCGTTTATTAATTGGGGAATTTGTAATTTGTAAACTCGTACCTAGCAATTATAGTGGCTAGTTTTTCCTTGTTTTTTCCTCGATGTGCCACTTGTAAGATTCGTCAGGATCGTCTCGTTAGTTTATTGTATGAGATTACTTACTAGGTTGATGATAGATGGTGACTAGCTAGCTATGTATGCATTGCAAGATAACATTGAATATTATGGGGAGAAAATTAAAGTTATGGAGTGTCAAGAGCTGAGTTGGACTTGGAATGGAATTAGTTTTTGCTCAGGTTCAGGTCAGTTCCACTCTGGAGAAGCTCTAGCTTAATAGTTAACTAGATGCTATGCCTTTTCTTTTCTTTTAGCTATTTTTTTGGATGATTTCCCTAGATTTGTTGCCAATTCTAATAATAACCGTGCCAGGTGGGCCAGGTCCATTCCATTGTGTTAATAACGATCATGAGAGTTGAAACCCAGTGAACAGATAATGAGACAGCCTTCAAATAATGTAAACAAGACATTCACATAATTACAAAGGTTTCAAGAAAATTGTCATATCTGCATCCTTTCTATCAGCGTGGCATAATTAAGTAGCATGTCAAGTAATTTGTTTATTGTATCGTAGTTGACCTAGTGGTTTCTTGTACCTTGACTACCTATAAAAATAGCAGAGTAGGACACCTGAGTATAATATGAATGCATCAGTTAGTCCCATGGATATATATGCATAGTCTCTGTCCTTCTGTTAGCTTCAGTGCTCTGGTTATGCAGTTATGTTCACAAGAGTGAGCAGGAAGGATGAACATATGTGCGGCAATTCTCCTGTTCTACATCTTGCAATTTGTCCATGGCCAGCCTGATAGTCAAGGTGTGCTGCTCCTAATTTGTTCAACTCTTTATGTTCAGGCAGTACACAATGGAAAGCAACTGCGGACTCACAATGTTCACATGTATCATTCAGAGGTATGTTTCTTGATCATGGTGGATTTACTGAGAATTTTGGATTGGTGTTTTCTATCCAGGTTTCATAAGCATCGATTGCGGCATTCCAGAGAAATCGTCCTATCAAGATCCCACATCAAGTATAATATATGTTTCGGACTATGGTTTCATCAGCACAGGAGCAAACCATAACATCTCCTCAGCATACATTAAACCATCACTGGCACAGCGCAATTACAATGTCCGATTCTTTCCAGATGGCACACGGAACTGCTACACCCTGAGGTCCTTGCAGGAGGGAAACAAGTACTTTGTTCGAGCTGTCTTCTACTATGCAAATTACGATAGCCTGAACAAGCTTCCTGTCTTTGATCTGTACCTGGGGGCAAACTACTGGCATGAGGTTAAGTTTAGTAATGCCGATGCAGTTAATTGGATGGACATCATAGTTGTGGCTCCTGCTGATTACCTGCAAGTCTGTTTGGTGAACAAAGGGACGGGAACTCCGTTTATATCTGGGCTTGATTTGAGGCCACTGAAGAGTACTCTTTACCCAGAGGCAAATACAACTCAATCTTTGGTGCTGATCAATTCCAATCGGTTCAACATGGGACCCACAGACAATTCAATAACCAGGTTAGTTTTAGATTTTGTTCTGTCTGAACTCTGATTTGAATTTAACTAACCAAGTTGGTTCTCTTACCATCTTGGTTAAAAACTGAAATATTGCCAACATTTGGGAGTACCTATGATGGCTGGGTATCTTGCGGACTTGTTGAAATATCTCTATGAACTAATGCAGATGTATCAGTTTTAGTCACACCTTGCATGAATTGTGTTTCTTTAAGCTTTACTTTTCAACGATAGTATGGTCGTTTTGACTAAATTCAGTGAACTAGTATACTAGATCACACAAATAATTTTTCTTTTGTCCAAACAGATACCCACTTGATCCCCACGACCGGCTTTGGTCAACATATGATACGATCCCAGACTGGACTGAGATATCTGCAACATCAGTAGTTCAGAATTACCTCACTGATGTCTATGATGTACCATCAGCTGTCATGCAAAGTGCAGCAACAGTTAATAGCTCGAGAATTAATTTCACTTGGGATCCATCTGACCCATCGGTGAACATCAGCTCCAAATACTTCTTTGTGCTCTACTTCTCCGAGTTACAGTCTGTACCGAGCAATGGGCTGAGACAGTTTGATATTATTGTCAATAACAATACATGGAACACACAACCTTATACTCCACCATTCCTATTTGCCGATTCCTTGTCTGGCACCGTACAGGGGCTGGCAAGTTATAGTGTCTCACTTGTTGCTACGAAAAATGCAACTCTTCCACCTATCCTCAATGCCATGGAGATGTACTTGGTGAAACCGCTAACTGAGTTTGCAACTGATCCTAGAGACGGTATGAATTTACTGGCGCAATTTTATGTTCATTATCATCAAATTCTATTATATTTTAACTTCACATGCAATTTGCACCATAAGAGGTAGTACACTGACAATGCTACAGCTTTTGTTTATCACATTTGACATGCAATAGTATCTCAAAAGTTTTCTTTGCTGATTGTTCATTTCGTATGAGCTTGATCATTTCCTTGTTCTTGCAAACCAGCTAGAGCCATGATGGAAGTCCAACAAAATTATGATGTGAAGAAAAACTGGATGGGCGATCCATGTGCTCCAAAAGCTTTTGCATGGGAAGGATTAAACTGTTCCTATCCTCCAGCTGATTCCTCTAAAATAACATCACTGTAAGTTTCATGGTCATGTTTGAAAGATAAAGAATATCCATTGCTATAGGTGGCATATTTTGGTATTCACCTTACAACATTTCAATAGGAGAACTAATTGTTCTTGATTATTATTTTTATTTGGACAGAAACTTGTCTTCCAGTGGGTTGGCTGGATCTATTGCTACTTATTTTGGAGATCTCAAATCACTCCAGTACCTGTAGGTTCTCACCATCACGTCTCATAACAGAACTTTTAATGCACCGCAATCCTTCATAATGAATTATGTAGTGTCCCCGATTTCTTTGTTTTTGAAGTACTAGTGATTGCTCTAATCAAAAATAAAACACTCATTTCTTGTTGAAACTGAATTGTGTATTTAGTATTTACCAAGGAATTTGCAAAACTATTAGCAAAATTCCAACACATGAGGATTAAGGACTCATTGGGCATATATTCCTAAGATGATTGGGAGTGTTACATATGGAGCCCAATTACTCATCAATATGTTAAAAAAATACACGGTTGTTTAGGGACTGTCTTTTTGGATTTTTCGAGTTCACACTTCACAGTAGATCACAGTATTTCTCTTGAAAGAATTGTATGTACTGCATATTTTTCAACAAAAAAAAGGAGAGAATTGCTTGTTTGTCCATGTAGTCGGGAAATGATACTTCAATAGTGCTCTTGTTTGGCGATATATATTGACAGAGTTAACCTGGTGAAATAGAGAAGTTTTATTGTTTACACGCAATGAATAGTTGCATATTTTTCTGTATCCTGTCATGATGAAGTCTGATAAATAGCATTTCTGAAACATTGAATTTCTTTATTCCTTTCTAGATATAATACACAAGTATTGTTACTTATTCCAGGGATTTGTCACACAACAACTTGTCTGGACCAATTCCAAATTTTCTAGGGCAGCTTCCGTTACTAATGTTTCTGTAAGTTTTATTGTTTTGATTTTGGAATTCTGACATAATAGTCTTTCTTTTTTGGTATATCATGAGATATTTTTCCTTTGTAGGGACCTGTCCAGCAATGATCTCAGTGGACCAATTCCTTACAATCTTCTTCAAAAATCACAAAATGGTTCTTTGTCACTAAGGTATGTTCTATGTTACAAAAATATAGAATGCACGGATAACTGAACTTAAATTATGCTTTGAAGAAAATATTCCATAATAACTTTATTACTTAAACTTTCAACGTGATTGAAGGATGCAGTTAATTACGAAAGTACTTAACAATTAAAATCATATATTATTTTTTCAATTTATTCTATAAATTTATTCTTTTTTGGCTGTGTGCATTTTATGCAGAGGCCGGGGGTGACTCAGTTTGATTATTCTATTATTTGGCTTTCTATGTTCTTCAATAGTTCAGTTTATTTGAATTACTTTTAGTATAATATTTTTGGCAATGAAGCAGTAAAAGAAAATCCATGGTCATGCTTCACTTTCTCAAATGTAGTAGGAAAGCATGGAAAGATTTCAGATATCAATTTACTCTTTCCCAATAATTTTAAGGGTACTTTAGTTTTTTTCCTGGACAATTTGTTGTTGAAGGAACTCTAAAAAGGTTCAGTATTAACCTAGTTAATAGTTAGATCTGATTTACGTATATAGAGAAAAAGTTTTCTTCTATAGCCTTTTCAATTGAGCATACTCTCTTCATTTTGAATACCATGGAAGCATATTCCTAATGACAATCACTGCTTTCTTTTGATACTGTCAGGGTTGGTTATAATGCAAAACTATGTGGCAACGATACTGAATGCGGATCAGGTCAAAAGAAAATTAAAGGGTCACTTCTTTCTGCAATAATTATTACAATAGTTGCCACTGTTGCACTAATTGTTGTCTTATTTCTTCTTCTGCGCCGAATGCTCAAGGCAAAAGGTAATAAAGTCAGGAGGACAGTAGGAGATATCTGCTTAGTGCATTACAGATTGTTTGCTGTTTTTCTTGCCTTGTTCTAACAATAGCATTTCTTGCATTTAACTATGTTCCTGATATTTGCTAAAATGTGTTACTGACATGTCAGACAAGAGAAGAGCTGCTGGTCCTACATATGAATCAGCATTACTTGAGAACAGAGAATTCTCTTACAGAGAACTGAAGCATATTACGAATAACTTTAGCCAGCAGGTTGGTAAGGGTGGGTTTGGAGCTGTGTTCCTTGGTTACTTGGAAAATGGTAACCCAGTTGCTGTGAAAGTGCGATCCGAGTCATCTTCACAGGGGGGTAAAGAGTTTCTAGCTGAGGTATTAGTAATTTTTAATTTGGAGAAGTTGTATGTATCACAGCTCTTTCATAACTCGTACCATTTTGTCTACAATATACTGTCAAAAATGCAGTTTGTTTTCCTTACACATGTTTTTTCTGTGTAACCATCTGTTTCTGAATTCTGATGAACGAACAATTTCAATATTTGGTGGTTTTGTAGATAAATTATGCTACTTACTAATCACTCTCATATCTGCTATGCTTGAATTTTCTGAATTTTATATTTCAGGCCCAACATTTGACAAGGATTCATCACAAGAATTTGGTTTCCTTGATTGGTTATTGCAAGGACAAAAATCATTTGGCCCTTGTGTATGAGTACATGCCGGAAGGGAACCTTCAGGATCATCTGAGAGGTTATCCATCTTATTATCCAAATATAGATGCTTATGTAGAGCTTTGACCCTTTGTTTGTGTCATGCTAGTAAAAGATAAAGTTGGTTTATCATGAAAATACTGTTAATGGCTAATATAAATACAATTATACGAACATAAGTTGTTCTGAGGCCTGAATGGAGGGAGATTAGCTGTCTGTTATATCTTTAGAATCAGATTATAGAGTAATCCTACATTTTTCTCAAAGGAGAATTGCAAAGACACAAGAACAGCCACGGTTGCTAAATGAAAACCACATAGATATATTAGAAAGTATCATTTCCATGGATTTCTCCAAAATCTGCAATAAACTGATTATGTTCATTTTCTGTTGATATGTGAAGCTACTACTAATAAGCCACTCACTTGGGAGCAGCGTCTTCACATCGCCCTTGATGCTGCACAAGGTTAAAACTTAACTAGCTACTACTATTAATTTTCACCCGGCAAAATACTACTATTAGTTTTCTGATATTTCATTCATACCCGCGCATTATTAGTTTATTACCTAATAAAAGTTTAATATCTGTGTATCTCAGGATTGGAGTATCTGCATGTCGCGTGTAAGCCAGCACTGATTCACAGGGACGTGAAGAGTAGGAACATCCTCTTGACCACAAATCTTGGAGCTAAGATCGCTGATTTTGGACTGACCAAGGTATTCAGTGAATCGAGAACACATATGACCACTGAACCAGCTGGTACATTCGGCTACTTGGATCCTGAGTAACTCCTCTAACTCTCGTATACTGAACTTTCCTTTTCAATATTGCGCGTGAACAATCGCATTGTTTTTCTTTCAAAATGAAATATCTTCAGTTCTACCAAGTAACTGAACTTCCATGTCATATTCTGCCCATCTTGTTCAGGTACTACCGCAATTATCATATCAGCGAGAAGAGCGACGTGTACAGCTTCGGTGTCGTCCTCCTGGAGCTGATCACAGGCCGCCCTCCCGTCATCCCCATCGACGAGAGCGTGAGCATCCACATTGGTGAGTTTGTGCATCAGAGCCTCGACCACGGCAGCATCGAGAGCATTGTGGATGCAAGGATGGGAGGAGGGGGAGGCTACGACATCAACTCGGTCTGGAAAGTCGCTGACTTGGCGCTGCATTGCAAGCGAGAGGTCTCCAGGGAGCGGCCTACGATGACAGAGGTGGTGGCACAGCTTAAGGAGAGCTTGGAGCTCGAGAGCCATGGCGATAGGAAGCACTTGGTGACTGGTGATGATGACGTGAGCGTGAGCAATCTTGGAGAGGAGACTGCACTTGAGGTAGAAGAGCAATCTGGGGAGATATCAAGAGTTTCTCCTGGGCCTGCAGTAAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007130

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