BGIOSGA007160

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Revision as of 02:52, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007160| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007160, complete gene.| tag = OsI_057...")
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Gene Name

BGIOSGA007160

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007160, complete gene.

LocusTag

OsI_05787

Ensembl Transcript ID

BGIOSGA007160-TA

Ensembl Protein ID

BGIOSGA007160-PA

Length

5552

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:2304052..2309603

Sequence Coding Region

2309460..2309603,2309160..2309366),complement(2308561..2308650,2308381..2308458),complement(2308014..2308082
,2307562..2307637),complement(2307197..2307291,2307065..2307100),complement(2306908..2306976
,2306042..2306110),complement(2305846..2305899,2305627..2305701),complement(2305332..2305424
,2305145..2305248),complement(2304988..2305036,2304830..2304916),complement(2304601..2304706
,2304404..2304491),complement(2304219..2304312,2304052..2304135

Genome Context

<gbrowseImage1> name=IndicaChromosome02:2304052..2309603 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:2304052..2309603 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCTGGGGCAACGCGCGGGGGACAAGAGCGAGTCCCGCTACTGCGGGGTGGAGGTGCTCGACTTCCCCGCCGGCGAGGAGCTCCCCGCCGTCCTCTCCCACTCCCTCTCCTCCTCCTTCGACTTCCTCCTCGCCCCCCTCGTTGATCCCGACTACCGGCCGACGCCCGGGTCCGTCCTCCCCGTGGCGGCGTCGGACCTCGTCCTCGGCCCGGCCCAGTGGAGCAGCCACATCGTCGGGAAGATCAATGAGTGGATTGATTTGGATGCGGAGGACGAGCAACTCCGGTTGGACTCCGAGATCACTCTGAAGCAGGAGATTGCGTGGGCGTCTCATCTCTCGTTGCAGGCGTGCGTTCTTCCTCCTCCCAAGAGATCTTCTTGTGCCAACTATGCTAGAGTTGTGAATCATATTTTGCAAGGCCTGACCAATTTGCAGTTGTGGCTTAGGATACCTCTGGAGAAGTCTGAACCTATGGATGAAGACCATGATGGAGCAAAAGATAATAGCGACATGGTTGGCTATTCACTTATCAGGAGCACACTGCCATCTATGAATTCACTAGGGCGGTGGTTTGGGGAGCCTGTTATAATATCTGGGAGATCAAATCATAACGTATCCCAAGGAGGAGTGCTCTCAGGTGATGAAAACCACACTGAAGATACTGCTGTTCGGCATGCATTGAGCCCATACCTTGACTACATTGCTTACATATATCAGAGGATGGACCCACTTCCTGAACAGGAACGCTTTGAGATCAATTATAGGGATTTTCTGCAATCTCCTCTCCAGCCTCTAATGGACAATTTGGAAGCTCAGACATACGAGACTTTTGAGAAAGATACCGTGAAATATACCCAGTATCAAAGAGCAATTGCTAAGGCATTGGTTGATAGAGTTTCCGATGATGATGTCTCAACAACAAAAACAGTGCTGATGGTTGTTGGAGCAGGCCGGGGGCCACTAGTGAGAGCGTCGTTACAGGCTGCTGAGGAAACTGGCCGCAAGCTAAAAGTATACGCCGTCGAGAAAAATCCTAATGCTGTTATCACCCTTCACAGTTTGATCAAATTGGAAGGATGGGAAAGCTTGGTTACTATAATTTCAAGTGACATGCGGTGCTGGGAAGCCCCTGAGAAAGCAGATATTTTGGTCAGTGAGTTGCTTGGTTCCTTTGGTGATAATGAACTTTCTCCCGAGTGTCTAGATGGTGCTCAGAGATTCTTGAAGCCAGATGGGATTTCTATTCCTTCATCATACACTAGCTTTATTGAACCTATAACAGCATCAAAACTACACAACGATATCAAAGCACATAAAGATATTGCACATTTTGAAACTGCATATGTTGTCAAACTACACCGAATAGCAAGACTTGCACCAACACAATCGGTTTTTACTTTTGATCATCCAAATCCCTCACCAAATGCTAGTAACCAAAGGTATACCAAGTTGAAATTTGAGATACCACAAGAGACGGGATCATGCCTTGTGCACGGATTTGCTGGATATTTTGATGCCGTATTGTATAAAGATGTTCATCTTGGAATTGAACCAAACACGGCTACACCAAACATGTTTAGCTGGTTCCCGATCTTCTTCCCATTGAGAAAGCCCATCTACGTACCGTCGAAGACGCCTATAGAAGTGCACTTTTGGCGATGCTGCGGTGCAACAAAGGTGTGGTACGAGTGGGCTGTGACGGCACCTTCTCCATCACCAATCCATAACAGCAATGGTCGATCATATTGGGTCGGCCTATAA</cdnaseq>

Protein Sequence

<aaseq>MPLGQRAGDKSESRYCGVEVLDFPAGEELPAVLSHSLSSSFDFLLAPLVDPDYRPTPGSVLPVAASDLVLGPAQWSSHIVGKINEWIDLDAEDEQLRLDSEITLKQEIAWASHLSLQACVLPPPKRSSCANYARVVNHILQGLTNLQLWLRIPLEKSEPMDEDHDGAKDNSDMVGYSLIRSTLPSMNSLGRWFGEPVIISGRSNHNVSQGGVLSGDENHTEDTAVRHALSPYLDYIAYIYQRMDPLPEQERFEINYRDFLQSPLQPLMDNLEAQTYETFEKDTVKYTQYQRAIAKALVDRVSDDDVSTTKTVLMVVGAGRGPLVRASLQAAEETGRKLKVYAVEKNPNAVITLHSLIKLEGWESLVTIISSDMRCWEAPEKADILVSELLGSFGDNELSPECLDGAQRFLKPDGISIPSSYTSFIEPITASKLHNDIKAHKDIAHFETAYVVKLHRIARLAPTQSVFTFDHPNPSPNASNQRYTKLKFEIPQETGSCLVHGFAGYFDAVLYKDVHLGIEPNTATPNMFSWFPIFFPLRKPIYVPSKTPIEVHFWRCCGATKVWYEWAVTAPSPSPIHNSNGRSYWVGL</aaseq>

Gene Sequence

<dnaseqindica>1..144#238..444#954..1043#1146..1223#1522..1590#1967..2042#2313..2407#2504..2539#2628..2696#3494..3562#3705..3758#3903..3977#4180..4272#4356..4459#4568..4616#4688..4774#4898..5003#5113..5200#5292..5385#5469..5552#ATGCCGCTGGGGCAACGCGCGGGGGACAAGAGCGAGTCCCGCTACTGCGGGGTGGAGGTGCTCGACTTCCCCGCCGGCGAGGAGCTCCCCGCCGTCCTCTCCCACTCCCTCTCCTCCTCCTTCGACTTCCTCCTCGCCCCCCTCGTGAGTACTACTCCACTAGCGCCTCCGCCCTTACTCGATTCCGCCTCCTCTCTGAGACTACTAGCTCACTTGGTGGTGGTGGCGCTGCTGCAGGTTGATCCCGACTACCGGCCGACGCCCGGGTCCGTCCTCCCCGTGGCGGCGTCGGACCTCGTCCTCGGCCCGGCCCAGTGGAGCAGCCACATCGTCGGGAAGATCAATGAGTGGATTGATTTGGATGCGGAGGACGAGCAACTCCGGTTGGACTCCGAGATCACTCTGAAGCAGGAGATTGCGTGGGCGTCTCATCTCTCGTTGCAGGTCCGTTGGATTCAGTGAATTTCACAAAATTATTAAATGTTTAATGGGAGTTTCTAATTGCGCATCAAGGAAATCGCTCTGGAGAGTTCATCACTTTTGCAATTTTGCAACCAGGAAGTGCTAGAGATAATTTTGATAGTGTTGATGGGCGATTGTCATGTATAAGAGTTCTCCACCATTTATGCATATTTTCAAGCTTGTCAGTGTGTAAATTAGTTATGCTTCCGAAGTCCATAACTAGAAACTAGAATAATTCCTACTTCCTCTGTTTCACAATGTAAGTCATTCTAGCATTTCCCACATTCGTATTGATCTAATGAATCTAGATAGATATACATGTTTAGATTCATTAGCATCAATATGAATGTGGGAAATGCTAGAATGACTTACATTGTGAAACGGAGGGAGTATAAGATTTCCTTACTTGGCGTGTTTGGGAGCTAGACTGACCCATATGCATTCTTGAAAACATGGTCTGAATCCTAGAAATTGCATGCATTTTCTTTCAGGCGTGCGTTCTTCCTCCTCCCAAGAGATCTTCTTGTGCCAACTATGCTAGAGTTGTGAATCATATTTTGCAAGGCCTGACCAATTTGCAGGTATCTTCCTCCATTTTCAATTACATATGTTGTGTATTGTGCATGTCATAAATGTTTCAATTTGATGAACATTTAGCTTTTGTTTGTTCTCTCTTTCTTAAGTTGTGGCTTAGGATACCTCTGGAGAAGTCTGAACCTATGGATGAAGACCATGATGGAGCAAAAGATAATAGCGACATGGTAAATTTCTGATAATTCTAGACTGGCCTGGACTGTTAAGCAGCAGACTGTTATATATCTGCATGTGCGGGGTAAATCTCACTCTTGAGTGCCCTTTTAAATTGCAGAGTGATACCGTAGACTCTTGGGAATGGTGGAATTCATTTAGACTATTATGTGAGCATAGCAGTCAACTGTGTGTGGCGCTTGATGTTTTGTAAGTGATGTTCTTGCATTGTTGCACCAAGTGCTTTCTTCCAAGTGAAGATGTCACTGATAATAAATCTATCATGTTATAGTTTTGGTTTTCATTACAAAGGTTGGCTATTCACTTATCAGGAGCACACTGCCATCTATGAATTCACTAGGGCGGTGGTTTGGGGAGCCTGTAAGAGCTGCAATTCTTCAAACAAATGTAACTGTACTACTTATTCAATTAAAGATGACATGCGATCTCCTTTCTTTGGAGATAAGAATAACCCTTCATGGTTCTGATCACTAAACGATTTTTCGTCTCCCAGGCTTTTCTGACAAATGCCAGAGGTTATCCTTGCCTGTCAAAGCGCCACCAGAAGCTGGCTTACTGGATTTTTTAACCATTCGGTTCAGGTGTGTTCCTTGTGCTTCCTTCTATCAAGCCTTTCCTCTCTTATCTTTTCTGCTAAGAACCCAATGCACAGGGTGCCTCCATTTCCATTCCAAATTTCAAAGGGCATCTTACTGTACCTTTTCTCTCGGATTTTTCACCCTCTGTTTTTCTTTAGGTTATAATATCTGGGAGATCAAATCATAACGTATCCCAAGGAGGAGTGCTCTCAGGTGATGAAAACCACACTGAAGGTAATTCTTGCAAAATTTGAGATTTATAATTTATTGGTTTTGTTATGTATTTCAACCACACATGAACTGGATTTATACATGAACTGAAAATTTCTTTTCAATATGTTTTAAGTAATAGTGGTGCTCTACAAACTTAACTTTGAAACAAATTCAGAGAGCAAAAGTCAGGACTTGAAATGAAATTAGCTGCTTGAATTTCTGAGGCGCACTGCAAAATGTATATTTTTTCTTTAGCACATGACTTATCTGTTGCCTAAACTGTTGTTTTAGATACTGCTGTTCGGCATGCATTGAGCCCATACCTTGACTACATTGCTTACATATATCAGAGGATGGACCCACTTCCTGAACAGGAACGCTTTGAGGTATTTAGTTTATCAGACTATCTCTCTGATTTGGCCCATGAGCTGATTCATTTAAGCGAGAGCTTTCTTGACCTTGAATTTATTTGCTTTATTCAGATCAATTATAGGGATTTTCTGCAATCTCCTCTCCAGGTAATTCCTATTCTGTAGCCCCCCCTTCTTTCTCCTCCCCTCATCATTTTGTTTTAATCTTTCCTCACAACATTACATTTTCTTGCAGCCTCTAATGGACAATTTGGAAGCTCAGACATACGAGACTTTTGAGAAAGATACCGTGAAATATACCCAGGTTTCTGCTAGATGTTTTGAATATCTTTAAATGTTACTGTGAAAATCACTAATTTAAAGCGACAGCAAATTTATCTTTCGAATCGGGCATTCTGATTATCGCTTCTCATTTTTTTTTAGAGAAAATCGAGCAATTCCCATTCCAAACATTGCCACTAAGAAAAAAATGACACTTTAAAGGCTGTAATTGTTCCGGTGCATCTCCAAAGACCGTTTTTTTTTTTTTTTGCCAATATGGCCATAGAAATAATTTACAGCTAGGTCCACCACATCACTTGACATTTTCCCCTGTCTGCATGGTATAAGCCATCTTGGGTTTCCCCAGGTTATCTTGAGCAAAGAAACCACAATGCAGGCATGTTCCATTCATACTAGCTTGCAGGTCTTGAGACTTGACTCTGTCCTTAAGATCAGCAAAGTGCTGGTTTGTCATGACACAGAAATAGTAGTCGCAGTATGCTTGTAGCCCCGTTATCTGTGTAGGCCAGCACCAGTCATGGGGCTGTATGCATCTGCACTGGATCACACTGATAGTAACTAGACTCCGTGCTTATCGTGGTTTCCCGGCAATGATTTAACTATGAATTAGAGGCAATGCTACCTAGAGACATGAGTGTGGGTAAAACTCGTTCTTTTTTTTTTTTGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGCATGTGTGTGTGTTTGGGGGGGGGGGGTACTTGGGTTCCCCTTAATTTTTTTCCTGTTCAACATAAACTCTAATACCAGTGTTGGCTGTATTAATGTTTTTCTGTTTTTCATCATATGAACAGTATCAAAGAGCAATTGCTAAGGCATTGGTTGATAGAGTTTCCGATGATGATGTCTCAACAACAAAAACAGTAAGATTGGACCTGCCATATTTTATCTTCCTCGCCAAATCATGTCTTGTTTCTGTATTGCCTATTGTTACTTGTTACTCTATTTTCTTATTATCTTACCTTTAGAATTCTATGATTTAACTTCATTTACTGTTCCATAAAGGTGCTGATGGTTGTTGGAGCAGGCCGGGGGCCACTAGTGAGAGCGTCGTTACAGGTGGCTACCTTTCTAATGAAGCTTCTGAACTCACTAAAAATCTTGACGAATGTTCTTGTGCTTAAATAATGCAATTGCAATGCATGCCATTTTTTTTCCGTATACATGCTTCACTATCTGAATATGCTTTCATATTCAATGCAGGCTGCTGAGGAAACTGGCCGCAAGCTAAAAGTATACGCCGTCGAGAAAAATCCTAATGCTGTTATCACCCTTCACGTGAGTTATTCAACGAATACAGCATTTGTCATTTTCGTTCTCAGATAGTTGATTGGATGTGGAAAGCTTGTCAGTGTAATCATTGTTGCAATCCTTTGTCCTTATGTTTTGTTGATAGTCGGGTTTTTCTCCTGTTTATCCTGTACGTGTGCAAATATGATTACATGATGACTATCTGATGTGCTTTGGGGCGGTGAAACAGAGTTTGATCAAATTGGAAGGATGGGAAAGCTTGGTTACTATAATTTCAAGTGACATGCGGTGCTGGGAAGCCCCTGAGAAAGCAGATATTTTGGTATGTTGATCCCTGCTATAAATGGACATTTCATATCTTTTCAAAGTGGTTTAATCAATGGCTTATATGCAAATATGGTACAGGTCAGTGAGTTGCTTGGTTCCTTTGGTGATAATGAACTTTCTCCCGAGTGTCTAGATGGTGCTCAGAGATTCTTGAAGCCAGATGGGATTTCTATTCCTTCATCGTACTGACCTTTTCTGTCCTTAGTCTATATTTTCATCTTTCTTGGATCAATTAAATCCCAGATATCCTTTTGTTCTTATATCATTTGATAACTTATGTTCCTTTGCAGATACACTAGCTTTATTGAACCTATAACAGCATCAAAACTACACAACGATGTAAGTGCCTCTACTATATCAATGATAACCGTAAGATATTTATGGAGTTTGAAGTGAATTGGTTTATACAGATCAAAGCACATAAAGATATTGCACATTTTGAAACTGCATATGTTGTCAAACTACACCGAATAGCAAGACTTGCACCAACACAATCGGTGAGCGACCACAGTTTCTGCTGTATTTATCCCTCATCAATAGTGTATCCTATCACATTTTGTGATATGTTATCTTTTCCAAAGAACTATTTCATTTGATTATCACCATTTTAAAACATGTAGGTTTTTACTTTTGATCATCCAAATCCCTCACCAAATGCTAGTAACCAAAGGTATACCAAGTTGAAATTTGAGATACCACAAGAGACGGGATCATGCCTTGTGCACGGTATGTAGCTATTGAGTTATACTTGTGATTATACTTTGCTATGTTACAAGGTAGAAACATCTATATATTTGGCAGAATTTGACTCTACTCATTCCCATCATTTTGGCAGGATTTGCTGGATATTTTGATGCCGTATTGTATAAAGATGTTCATCTTGGAATTGAACCAAACACGGCTACACCAAACATGTTTAGCTGGTACACTAAATGGCAAAACCTGATTTTTATGTGCTGGCAATAACTGTTCTTGAATAGTGCCTTCAATATTATCTTTTATGTATCTCATCAGGTTCCCGATCTTCTTCCCATTGAGAAAGCCCATCTACGTACCGTCGAAGACGCCTATAGAAGTGCACTTTTGGCGATGCTGCGGTGCAACAAAGGTATTGTGGTTTATCGCACTGCTTTTGATTATGAGATGTTTGAATACCCCTTACCTGAAATCTCATCTCCCGCATTGCTACAGGTGTGGTACGAGTGGGCTGTGACGGCACCTTCTCCATCACCAATCCATAACAGCAATGGTCGATCATATTGGGTCGGCCTATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007160