BGIOSGA007162

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Revision as of 02:52, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007162| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007162, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA007162

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007162, complete gene.

LocusTag

OSJNBA0026E05.31

Ensembl Transcript ID

BGIOSGA007162-TA

Ensembl Protein ID

BGIOSGA007162-PA

Length

2252

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:2290259..2292510

Sequence Coding Region

2291860..2292510,2291473..2291689),complement(2291308..2291384,2291176..2291215),complement(2291006..2291069
,2290828..2290897),complement(2290259..2290543

Genome Context

<gbrowseImage1> name=IndicaChromosome02:2290259..2292510 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:2290259..2292510 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCACACAGAGTGTCATTGCTGTAAAGCAATTCAGTGGCCCTGACAAAATCGCACAAGCATACACTGTTCCACAGCCATCAGCTCATGTGCTCTCCAACGCTAACTATGACTATGATCTCTGTGGTTCAACAAATAGTACCTCATTATCATGTGCTATCCAATCCTCAAACATTAAGACCGAATCAATCAGTTCATCTAGCCTGCCAAAGATCCTTCCATTTAGTACTGACTCAAATGGTGAAAGTTCACTTTCTCGCATGTCGCAAGCCGAGTTTTCGGACCCAATTTTGTCTAGTTCTTCTACATTTTGTACAAGTCTGTACACCTCATCACCGATGAACTCTGGTTCATGCCGAAAAACCGGTTATTTGCCTTTCCTGCCACAACCTCCTAAATGTGAGCAGCAGCAGAATTCAGTTGGGCAATCATCCAGCTCTCTGATGCTCCTTGATGCTGATCTCAGAAATAGTGGTCATGCTGATGATGAACACACAGATGACCTCAAGGACTTTCTTAACCTCTCTTCAGATTGTAGCTTCCATGGGAAATGCAGTGCCATGGCTTATAATGAGCAGATGGAGTTTCAGTTCTTGTCTGAACAGCTCGGAATTGCGATCTCAAACAATGAGGAGAGTCCTCGGTTAGATGACATATACGACAGACCACCGCAACTTATGTCTCTTCCAGTGTCATCTTGCTCTGATCAGGAGGATCTGCAGGATGCAAGATCTCCTGCTAAAGTTCAGTTGAGTTCATCTCGGTCTTCATCTGGAACTGCATCATGTAACAAACCAAGACTGAGGTGGACACCGGAGCTCCACGAGCGTTTCGTAGATGCCGTGAACAAGCTTGAAGGGCCAGAAAAGGCAACTCCCAAGGGTGTTCTGAAGCTTATGAAGGTAGAGGGCTTGACCATCTATCATATAAAGAGCCACTTACAGAAGTATCGGCTTGCGAAGTATCTTCCAGAGACAAAAGAAGACAAGAAGCAAGAAGAAAAGAAAACAAAATCAGTGGCTAATGGAAATGATCATGCAAAAAAGAAGAGTGCTCAAATGGCAGAAGCTCTTCGGATGCAAATGGAGGTCCAGAAACAACTCCATGAACAACTAGAGGTACAAAGGCAATTACAGCTGCGCATAGAGGAACACGCAAGATATTTGCAGAAGATATTGGAAGAACAACAGAAAGCAAGAGAATCCATATCCTCAATGACTAGTACAACAGAAGGAGAATCTCCTGAATTCGCACCGATGGAGAAAACCGAGGACAAAGCAGAAACCTCTTCAGCACCTTTGTCAAAGTGTAGAATTACAGATACTGATGCAGAATGCCATTCAAAAGTTGATAATAAAAAGACAAAGCCTCAGGCTGATCTTGAAATGGTGCATGACGAATAA</cdnaseq>

Protein Sequence

<aaseq>MSTQSVIAVKQFSGPDKIAQAYTVPQPSAHVLSNANYDYDLCGSTNSTSLSCAIQSSNIKTESISSSSLPKILPFSTDSNGESSLSRMSQAEFSDPILSSSSTFCTSLYTSSPMNSGSCRKTGYLPFLPQPPKCEQQQNSVGQSSSSLMLLDADLRNSGHADDEHTDDLKDFLNLSSDCSFHGKCSAMAYNEQMEFQFLSEQLGIAISNNEESPRLDDIYDRPPQLMSLPVSSCSDQEDLQDARSPAKVQLSSSRSSSGTASCNKPRLRWTPELHERFVDAVNKLEGPEKATPKGVLKLMKVEGLTIYHIKSHLQKYRLAKYLPETKEDKKQEEKKTKSVANGNDHAKKKSAQMAEALRMQMEVQKQLHEQLEVQRQLQLRIEEHARYLQKILEEQQKARESISSMTSTTEGESPEFAPMEKTEDKAETSSAPLSKCRITDTDAECHSKVDNKKTKPQADLEMVHDE</aaseq>

Gene Sequence

<dnaseqindica>1..651#822..1038#1127..1203#1296..1335#1442..1505#1614..1683#1968..2252#ATGAGCACACAGAGTGTCATTGCTGTAAAGCAATTCAGTGGCCCTGACAAAATCGCACAAGCATACACTGTTCCACAGCCATCAGCTCATGTGCTCTCCAACGCTAACTATGACTATGATCTCTGTGGTTCAACAAATAGTACCTCATTATCATGTGCTATCCAATCCTCAAACATTAAGACCGAATCAATCAGTTCATCTAGCCTGCCAAAGATCCTTCCATTTAGTACTGACTCAAATGGTGAAAGTTCACTTTCTCGCATGTCGCAAGCCGAGTTTTCGGACCCAATTTTGTCTAGTTCTTCTACATTTTGTACAAGTCTGTACACCTCATCACCGATGAACTCTGGTTCATGCCGAAAAACCGGTTATTTGCCTTTCCTGCCACAACCTCCTAAATGTGAGCAGCAGCAGAATTCAGTTGGGCAATCATCCAGCTCTCTGATGCTCCTTGATGCTGATCTCAGAAATAGTGGTCATGCTGATGATGAACACACAGATGACCTCAAGGACTTTCTTAACCTCTCTTCAGATTGTAGCTTCCATGGGAAATGCAGTGCCATGGCTTATAATGAGCAGATGGAGTTTCAGTTCTTGTCTGAACAGCTCGGAATTGCGATCTCAAACAATGAGGAGAGTCCTCGGTTAGATGTGAGTTCCTTAGCTTCATCATTGATATTTTTGTACTAAATTATATGTTTATTTATCCTCTAATTTAATGGGTATCAATTACTACTTGCAAAAGGTTTTTTCAATGTTCACTTGTGAATATTTATCATGGCTTGATTTGCATTTTAATCACTTATTTTCTTGTTCCTTAGGACATATACGACAGACCACCGCAACTTATGTCTCTTCCAGTGTCATCTTGCTCTGATCAGGAGGATCTGCAGGATGCAAGATCTCCTGCTAAAGTTCAGTTGAGTTCATCTCGGTCTTCATCTGGAACTGCATCATGTAACAAACCAAGACTGAGGTGGACACCGGAGCTCCACGAGCGTTTCGTAGATGCCGTGAACAAGCTTGAAGGGCCAGAAAGTAGGGTGATCACTCTAGTTCATTGAGAGGAATTTGATCTTGAGAAAATAAAACCATCCTTTTATGTTCTATTTGATACATCTTGTAGAGGCAACTCCCAAGGGTGTTCTGAAGCTTATGAAGGTAGAGGGCTTGACCATCTATCATATAAAGAGCCACTTACAGGTGCTTTAGTGAAATTTTTTTGATCCATAGTCAAATTATTTCATATAAAATCATTATTTATAATGGTTAAAACACTACTTGTCACAATGCAGAAGTATCGGCTTGCGAAGTATCTTCCAGAGACAAAAGAAGGTAAGGCAATTAAGCCAAAGAGGAAGTTTAAATATCTTAGGAAATATGAAATAATTAGCTTTGTCGGTAATTATTAACTATTGGTTCTGATGCATGCTCGATCTAGACAAGAAGCAAGAAGAAAAGAAAACAAAATCAGTGGCTAATGGAAATGATCATGCAAAAAAGAAGTGAGCATCTCCCTTCCTTTCAATGACTTACTGCCTAACATTGAACATATCCTGCTGTCTGCATGCATAAACTGTAAAACTTCATACTGTTTTCTGTTTCTTAATTAGGAGTGCTCAAATGGCAGAAGCTCTTCGGATGCAAATGGAGGTCCAGAAACAACTCCATGAACAACTAGAGGTAAGCATCAGACATGTCAGGGCAGTATTTTGAAGGCTAATTAAGGTGACACTGTATGTTCATATGTTTGCAGCAGCCCTGATTCCAGATTATGGTTAAAAGACTTAGTATTTACACAGTATTCTTTTTGGAGCAATTTACACATTATTTTTTCGGGAATACGCAAAAGGATTGCGCACCTTTGTATTAAGGAAATTTACACATTATTGTTCATCAAAGCATGCTTACCTGAATATTATATATTTAGATAAACTTGCAGTGTTAACATCTTTCTTGGTCATCAGGTACAAAGGCAATTACAGCTGCGCATAGAGGAACACGCAAGATATTTGCAGAAGATATTGGAAGAACAACAGAAAGCAAGAGAATCCATATCCTCAATGACTAGTACAACAGAAGGAGAATCTCCTGAATTCGCACCGATGGAGAAAACCGAGGACAAAGCAGAAACCTCTTCAGCACCTTTGTCAAAGTGTAGAATTACAGATACTGATGCAGAATGCCATTCAAAAGTTGATAATAAAAAGACAAAGCCTCAGGCTGATCTTGAAATGGTGCATGACGAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007162