Os12g0562900

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Revision as of 10:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0562900| Description = Prefoldin domain containing protein| Version = NM_001073564.1 GI:115489089 GeneID:4352529| Length = 4489 bp| Defini...")
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Gene Name

Os12g0562900

Description

Prefoldin domain containing protein

Version

NM_001073564.1 GI:115489089 GeneID:4352529

Length

4489 bp

Definition

Oryza sativa Japonica Group Os12g0562900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23283753..23288241

Sequence Coding Region

23283816..23283982,23286323..23286380,23286509..23286580,23287532..23287651,23287732..23287833
,23287919..23287990

Expression

GEO Profiles:Os12g0562900

Genome Context

<gbrowseImage1> name=NC_008405:23283753..23288241 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23283753..23288241 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggcctcctcctcctcctcgtcggcggcggcgacgccgcagggggtgacggagcggcggggcatcccggcggcgtccttcgtcgaggacgtcgagacctacctccgccaggccgggctcgacgtcaactccggcctcgccttcctccaggaaaggctgcagcagtacaaaatagtggagatgaaacttctagcacaacagagagatcttcaggcaaaaattcctgatatagagaagtgcttggatattgttgcaactttacaagctaaaaaagctttgggtgaggcactcacagccgattttgaattatctgagggaatctactcccgtgcgaaaatcgaggacaccgattctgtgtgcctatggttgggtgcaaatgtaatgctggagtactcctgcgacgaggccaacgccctcttgaaaaagaatctggaaaacgccaaggccagtttagaagtccttgttgctgatctccagttcttgcgggaccaacaaacgatcactcaggttacaattgctcgggtgttcaactgggacgtgcaccaacggagaagcaagcaagctatcaaagaaacctga</cdnaseq>

Protein Sequence

<aaseq>MAAAAASSSSSSAAATPQGVTERRGIPAASFVEDVETYLRQAGL DVNSGLAFLQERLQQYKIVEMKLLAQQRDLQAKIPDIEKCLDIVATLQAKKALGEALT ADFELSEGIYSRAKIEDTDSVCLWLGANVMLEYSCDEANALLKKNLENAKASLEVLVA DLQFLRDQQTITQVTIARVFNWDVHQRRSKQAIKET</aaseq>

Gene Sequence

<dnaseqindica>64..230#2571..2628#2757..2828#3780..3899#3980..4081#4167..4238#aatttgggccttctcctccctcctcctcctcctcctcctcctccaactccctcgagatttctcatggcggcggcggcggcctcctcctcctcctcgtcggcggcggcgacgccgcagggggtgacggagcggcggggcatcccggcggcgtccttcgtcgaggacgtcgagacctacctccgccaggccgggctcgacgtcaactccggcctcgccttcctccaggaaaggtataggtagagatagctccagctaagctaagcctcgcgacgcgcgttccccctcccttctcttctcctcctcggggtgtcgaggcgaccgcctgccgcgcagtgtgctcggtgaggcggatcgggggggggggggggggtcgcttcctcgcgtggtggtggtgcgcgcgcgcatgtggatcggcgagatggggacggcgtctcccgtgtgcggcgcttgatgggaggttcgatccaccggcggcgtcgtcttgcgttggatctatcatctatgtttgtgtcgctgtgatctatctccgcgagttcctcgggaatttaggattgcagctgacctgatgggatgggaggtcgcgctagctagtaggtgaaacattaggatttcacattacgattttattaggatttcatttttaggattttaggatttcagggttttggatttcacattacgattttattaggattttaggatttcagggttttggagttattaggatttcacattaggattttaggatttcagggttttggagtggcgttgaagggatcatgagtggctccgtcgcgcagcgcttgtcagtgctacctacctgtttgcagagttgcttaggtaatggccttggagtgtgcatacctgttgttttggttgtttagcgactcggcttggccgctccagaggtctggaagctgctgtgctgtatgactgattgatttcattgatttctttgattactcatggtttgttgatcatgccctttggtacgctagttgttggtgcctgcgtttttctgttgattatggatgatagccggatttcctgttaaagacatgttgttcggtaaaattgctggttctgcggttacagcttgtgcatcatgcttgatctgggaaaggctattcctttcttgggatcttgaaccctcaacacaagcatgtcaatcaatgtgattgtcccccatgattcagatgcgaacaactctcacgttgaccagtaatcccatttagtctcgtttcaagaattatggggttactaatatttcaaataatgctaattccaggtagttgtgctagtgcagttggcaggggcagccgtcgtccgccccgccagcttgcgtttgactcccaagcgtgctcacatccgttgttaattaatcgataccaagctccttcttagttatcctatgttttctaccttcaaataaggaatgcaacgtgtcattgtagatgtagaattttaggggatgtagacctagacatctgttggtctaggtcagttattctaatgataaaggtttttaaggtgcaccaccttgtatggagaccatttgttcgttttgatgtaacggctatcatgaatcttaactgtaccttcaaggatctaagagaccatctataaccttttaaaggataatgatatctttaaacattgtcaaatttcattactgatagataaaaagaaaataagatagtatttgaaaggaaagggattaaaatacaattaattccatcctttattgtcaaacgatttgccattttccttgctaaaagaaaaacttccttcagtaatttttgttggcactgagaaatgcaaatcttgttctggaatacaaacatttaataatcagtagtacactaggttacacaaaagaattgacttctgagactttcatcttgtgaaattgatagttaatttagctttttattttttggggtgttttctattcatcaacgacttgagaattgctagatcccaatcaactttcttttttcattcttcttatttacttgcacttgaaacagaaaattacattagaaacaacattacatttcccgcagaaaaaaaataaacaacattatattataaaactacttcccactttgagcggcaaagcactaaaagaacactctccaaaatgtatagctatagattgaaggaatcagggaattaacatgtgtcaaattttctcctggcctatcggtcctaatcattattacgtttactcttagaacctgtgaaaagttcattggtttatacataatattttggtgttctgtcagtctacttcatatgcagaactgattctggtcatgcactttatattgcctttgtaaagacacagagaagttctgttgtcaaaatgatgacgtccatttcaacagatgtttggtccaaattgaccaatcagaaaaggataattgggaataactcctaaaatttggttgtttaaaaatatcttgcagtcttggcacagcgttattgtttctgtgcacattttcacttctacttggttgtgccttatttagagggtaatttaattcatcttttacccccatttttaggctgcagcagtacaaaatagtggagatgaaacttctagcacaacagagagatcttcaggtgctcatacaaatcaaactaatggatttctagttcattgatctgacttgtatatatatagttgttactatgggtgttaaactgttaatgctagcctgtgtaactactcttttattttgttgccacaggcaaaaattcctgatatagagaagtgcttggatattgttgcaactttacaagctaaaaaagctttgggtgaggtctgtacaatctcttaaaagtcatgtttcagttatgtttctatttttgttgtgcttgggatgttttgcttctttttgtcagaaaatgtttttaagtcaatatgtaggtatgcataacttaaccatttttgtccaggacaccagctaaagtctagtatcattcatcaaaattcaactttgatggtttgcatgctacttaacatttttctgttaactatttttggccatgtatgtcattttagggcagctggttatcaccttgttctgttatccctaaatgtagattgatgactacaactgttcttttagatattggaaactgctaagtactaattgtcattattgtgctactgttaactagacttcatagcaatggctggtttatgtgaagtaaaacatttgagtggctgatattttttttattacatgatcattaaagagtagaaattaggttgttgtgttagttttggtatgtattatacaccaaagtgccaatgttcatgaattcttttaagtgaagcaccaaaatgataatcagcctgctccaagggttttatgccttattgctcactccgcataccatgaacattacctgaactcttctctgattcaagcaaacaaattctcttgccactcaagcttgataatgttcaagttaatgtgtatatggtgaatggaagagttgaataactgatagttcctttaagagaaaattccatttgtggcgcaaagatttcacccaaatctaaaattatcacaaaaatttgggataccaattaagaccacagggagaaccaaaacttcttatctataccacaaatctgtgccttatctacaaatggaattttctctctatagagattatagtgattgctagtcatagtgctatttttagcaggcataacatcttcttgaaagctaactactaccgcttccaaataattgatgcaggcactcacagccgattttgaattatctgagggaatctactcccgtgcgaaaatcgaggacaccgattctgtgtgcctatggttgggtgcaaatgtaatgctggagtactcctgcgacgaggttattttgggcataccaagcatctgaattcatgttcccttttgctttagtttcttccatcatgtcttcatatgttacaggccaacgccctcttgaaaaagaatctggaaaacgccaaggccagtttagaagtccttgttgctgatctccagttcttgcgggaccaacaaacgatcactcaggtagactggttatctgacttaagattccttcaactcataaattttgtatgattgagcatcctaaccatgattccatcttcctcaggttacaattgctcgggtgttcaactgggacgtgcaccaacggagaagcaagcaagctatcaaagaaacctgatcatcatacccgcagattctaccagccaaaatgagatcgcgacatttttgtacttcttgccacctctggcagtctaggccatcgtagcatgtgccctctgttggcgccttgccgtgtaacagtgtatcaggttttatggtgttggattgttggaactctgtttgccttgcaagtagaaattggtgtttgttttcacttcggttcgcgtgatggaacatattttgaggagtaaaaatcttagcggttttcag</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0562900, RefSeq:Os12g0562900