Os12g0563000

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Revision as of 10:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0563000| Description = Phospholipid/glycerol acyltransferase domain containing protein| Version = NM_001073566.1 GI:115489093 GeneID:4352530...")
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Gene Name

Os12g0563000

Description

Phospholipid/glycerol acyltransferase domain containing protein

Version

NM_001073566.1 GI:115489093 GeneID:4352530

Length

2506 bp

Definition

Oryza sativa Japonica Group Os12g0563000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23295343..23297848

Sequence Coding Region

23295343..23296101,23296931..23297848

Expression

GEO Profiles:Os12g0563000

Genome Context

<gbrowseImage1> name=NC_008405:23295343..23297848 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23295343..23297848 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaagaccaagctcttccccgccctcttctccctcctcctccacggcggcgccgccacattgccgccgccgcgtgttcccgccgtgaccgtccacgggtgcacgcctcccgcggcgcggctctccgccggcggcgagaagacggtgacgatggtcgtcgacgtcgagggcgcgctgctccgctcgtcgtcgtcgcgctcgctcttcccctacttcatgctggtcgccgtcgaggccgggagcttcctccgcggcctcctcctcctcctcctctaccccgtcatctccctcctcgccggcgccggcggcggcgacgtggcggtgagggccatggcggcggtggcgttctgcgggctgcgcgagtcgcggttccgcgccggccgcaccgtgctgccgcggtggctcctcgacgacgtcgggaaggaggcggtcgacgccatcgtcacactcacacggcggcgttcgtcgccggcggcgacggcgacggtggtgtgggcgagcagcatgccgagggtgatggtggagccgttcttgagagagtacatggcggcggcggagggaggaggcgaggtggtggtggcggcgagggagatgaaggtggtgtgggggttctacactggggtcatggaggacggtggcgaggtggcggcggcgtcgccggaggtgaggagggcgatggaaggggtcgatgacgtcgttggtttctcgggaggatccatggatttgctccggagtcctttggtgtcattttgcaaggaggtgtacgtggtgagccacgaggagaagagcaagtggcggccattgccgcggcggcgcgagtaccctcgccccctcgtcttccacgacggccgcctcgccttcctcccgacgccgctcgccgccgccgccatgctcgtctggctccccttcggcgccgccctcgccgccacccgcctcgccgtcgcgctcgccctcccctaccgccacgccacgctcctcctcgccgccaccggccagtcctggcgcctcaggggctcgcccccgcccacgcccacgccgccgccgcggcgcgccaccggcgagcggcggcgcgggcagctctacgtgtgcaaccaccgcacgctgatcgacccggtgtacgtgtccatcgcgctggaccgccccgtgcgcgccgtgtcgtacagcctcagccgcgtctccgacctcctctccccgatcggcgccaccgtgcgcctcgccagggaccgcgcccacgacggcgccgccatggcgcgcctcctcgaggcgggggcccacgtcgtcgtctgccccgaggggaccacctgccgggagccgtacctgctgcggttcagcccgctgttcgcggagctcgccgacggcgtcgtgcccgtggcgctcgccgccgaggcggcggcgttccacggcacgacggccggcgggtggaagtccatggacgcgctgtgctacctggccaacccgaggatgtgctacacggtggagttcctccccgccgtcgacgcgtcgccggtgagggaggggaaggcggcgagcaccgagctggccaacgccgtgcagcggcgggtggcggaggcgctcgggtacgagagcaccatgctcaccaggaaggacaagtacctcatgctcgccggcaacgacggcgtcgtccgccgccgcggcgacgtcggcgccaagtaa</cdnaseq>

Protein Sequence

<aaseq>MAKTKLFPALFSLLLHGGAATLPPPRVPAVTVHGCTPPAARLSA GGEKTVTMVVDVEGALLRSSSSRSLFPYFMLVAVEAGSFLRGLLLLLLYPVISLLAGA GGGDVAVRAMAAVAFCGLRESRFRAGRTVLPRWLLDDVGKEAVDAIVTLTRRRSSPAA TATVVWASSMPRVMVEPFLREYMAAAEGGGEVVVAAREMKVVWGFYTGVMEDGGEVAA ASPEVRRAMEGVDDVVGFSGGSMDLLRSPLVSFCKEVYVVSHEEKSKWRPLPRRREYP RPLVFHDGRLAFLPTPLAAAAMLVWLPFGAALAATRLAVALALPYRHATLLLAATGQS WRLRGSPPPTPTPPPRRATGERRRGQLYVCNHRTLIDPVYVSIALDRPVRAVSYSLSR VSDLLSPIGATVRLARDRAHDGAAMARLLEAGAHVVVCPEGTTCREPYLLRFSPLFAE LADGVVPVALAAEAAAFHGTTAGGWKSMDALCYLANPRMCYTVEFLPAVDASPVREGK AASTELANAVQRRVAEALGYESTMLTRKDKYLMLAGNDGVVRRRGDVGAK</aaseq>

Gene Sequence

<dnaseqindica>1..759#1589..2506#atggccaagaccaagctcttccccgccctcttctccctcctcctccacggcggcgccgccacattgccgccgccgcgtgttcccgccgtgaccgtccacgggtgcacgcctcccgcggcgcggctctccgccggcggcgagaagacggtgacgatggtcgtcgacgtcgagggcgcgctgctccgctcgtcgtcgtcgcgctcgctcttcccctacttcatgctggtcgccgtcgaggccgggagcttcctccgcggcctcctcctcctcctcctctaccccgtcatctccctcctcgccggcgccggcggcggcgacgtggcggtgagggccatggcggcggtggcgttctgcgggctgcgcgagtcgcggttccgcgccggccgcaccgtgctgccgcggtggctcctcgacgacgtcgggaaggaggcggtcgacgccatcgtcacactcacacggcggcgttcgtcgccggcggcgacggcgacggtggtgtgggcgagcagcatgccgagggtgatggtggagccgttcttgagagagtacatggcggcggcggagggaggaggcgaggtggtggtggcggcgagggagatgaaggtggtgtgggggttctacactggggtcatggaggacggtggcgaggtggcggcggcgtcgccggaggtgaggagggcgatggaaggggtcgatgacgtcgttggtttctcgggaggatccatggatttgctccggagtcctttggtgtcattttgcaaggtaaaatcaccaatgaaaattttctcgtgtttatagttattccctctgttttatattacaactcgtttgattctttttattagcgaaaattcttttcaagcttgaccaatctataaaaaaataatattaaatatatttctttttacatcaattaaatgcttttgaatgacctagttgtgttcgggaggtgagctggtgaggttgggaactcttacctcccgcgcaggtaaaacggagcgacacatttttttatgattaattaagagtttactactacctctgttataagacattttaactttgtcaatgttaaactgtttcaagtttaatcaagtttgtagaaaaaaatagtaacattttcatccaaagacaaatttattatgaaaatatattcaattatttatttaatgaaactcatttagtatttaaatattactatatttgtctataaaattagttaaatttaaaatagtttgactttgaccaaaatcaaaatgtctcgtgacctgaaacaaagggagtattttttataaaaaatagattaaaatgattttttaaagcaactttcatataaatttttcttttagaaaaacgtaccgtttagtgatttgaaaaaaaaatggattaaaatgattttttaaagcaactttcatataaatttttcttttagaaaaacgtaccatttagtgatttgaaaagagtgcgcgaaaaaacgtagaatgtgagtttggaaagttggggaaagaactcaacctaatttaaaagattgatcagtgtaactaaagttgtactccgtaattgcttgactaaatcgtggctaattttgcaggaggtgtacgtggtgagccacgaggagaagagcaagtggcggccattgccgcggcggcgcgagtaccctcgccccctcgtcttccacgacggccgcctcgccttcctcccgacgccgctcgccgccgccgccatgctcgtctggctccccttcggcgccgccctcgccgccacccgcctcgccgtcgcgctcgccctcccctaccgccacgccacgctcctcctcgccgccaccggccagtcctggcgcctcaggggctcgcccccgcccacgcccacgccgccgccgcggcgcgccaccggcgagcggcggcgcgggcagctctacgtgtgcaaccaccgcacgctgatcgacccggtgtacgtgtccatcgcgctggaccgccccgtgcgcgccgtgtcgtacagcctcagccgcgtctccgacctcctctccccgatcggcgccaccgtgcgcctcgccagggaccgcgcccacgacggcgccgccatggcgcgcctcctcgaggcgggggcccacgtcgtcgtctgccccgaggggaccacctgccgggagccgtacctgctgcggttcagcccgctgttcgcggagctcgccgacggcgtcgtgcccgtggcgctcgccgccgaggcggcggcgttccacggcacgacggccggcgggtggaagtccatggacgcgctgtgctacctggccaacccgaggatgtgctacacggtggagttcctccccgccgtcgacgcgtcgccggtgagggaggggaaggcggcgagcaccgagctggccaacgccgtgcagcggcgggtggcggaggcgctcgggtacgagagcaccatgctcaccaggaaggacaagtacctcatgctcgccggcaacgacggcgtcgtccgccgccgcggcgacgtcggcgccaagtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0563000, RefSeq:Os12g0563000