BGIOSGA007208

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Revision as of 02:53, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007208| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007208, complete gene.| tag = P0575F1...")
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Gene Name

BGIOSGA007208

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007208, complete gene.

LocusTag

P0575F10.36

Ensembl Transcript ID

BGIOSGA007208-TA

Ensembl Protein ID

BGIOSGA007208-PA

Length

4639

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1394161..1398799

Sequence Coding Region

1398740..1398799,1398499..1398639),complement(1398087..1398410,1397895..1397963),complement(1397700..1397816
,1397221..1397295),complement(1397053..1397130,1396874..1396969),complement(1396652..1396701
,1395894..1395948),complement(1395673..1395804,1394974..1395021),complement(1394729..1394887
,1394161..1394301

Genome Context

<gbrowseImage1> name=IndicaChromosome02:1394161..1398799 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:1394161..1398799 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCCATCTCCGCCGCCTCCCCCGTCGCTGGGAAGGCCGCCGCCTTCGCCCACAAGAACGAGCTCGCCGCCGCCGCCGTGGCGCCGTCGCAGCAGCAGCTGCAGCGGAGGGTGAGTGGGAGGAGGGCGCGTTCGGGGAGGGTCCGCGCCGTCGCCACGCCCGCCCGCGCCCCCCGCGCCCCGTCCTCCACTGGCTCGGTGAAGAGCGCCATGACGATGACAGAGAAGATCCTGGCGAGGGCGTCGGAGCGCGCCAGCTTGGAGCCCGGGGAGAACGTGTGGGTGGACGTCGACGTGCTGATGACGCACGACGTCTGCGGCCCTGGCACCATCGGGATCTTCAAGCGGGAGTTCGGGGAGGACGCCAAGGTTTGGGACCGAGAGAAGGTGGTCATCATCCCGGACCACTACATCTTCACCAGCGATGAGCGAGCAAACCGAAATGTTGATATCCTCAGGGATTTCTGTATGGAGCAGAACATCAAGTACTTCTATGACATCAAGGACCTGAGCAATTTCAAAGCAAATCCAGACTACAAGGGTGTTTGCCACGTTGCTCTTGCTCAAGAGGGTCATTGCAGACCAGGCGAGGTTCTCCTTGGTACTGATTCTCATACATGCAATGCTGGAGCCTTTGGCCAATTTGCAACTGGAATTGGAAACACTGATGCTGGTTTTGTGATGGGCACTGGGAAGGCTCTTCTTAAGGTGCCTCCAACTATCAGGTTTGTATTAGATGGAGAAATGCCACCTTATTTACTTGCAAAGGATCTGATTTTACAAATTATTGGTGAGATTTCTGTATCTGGCGCAACATACAAATCCATGGAGTTTGTTGGATCAACTGTGGAAAGTCTAAATATGGAAGAGCGAATGACACTGTGCAACATGGTTATTGAAGCTGGTGGCAAGAATGGTGTTGTGCCTGCCGATCAAACTACATTTAACTATCTTGAGGGCAAGACATCAGTTGAATACGAGCCTGTCTATAGTGATGCTCAGGCCAGATTTGTTAGTGACTACCGGTTTGATGTATCCAAATTGGAGCCAGTTATTGCCAAGCCACATTCACCTGACAACCGTGCTCTAGCAAGAGAGTGCAAAGATGTCAAGATTGACCGGGTCTATATCGGTTCTTGTACTGGAGGTAAAACTGAGGACTTCTTTGCTGCTGCGAAGGTGTTCTTAGCTTCGGGGAAGAAGGTTAAAGTTCCCACTTTTCTCGTTCCGGCGACACAAAAGGTGTGGATGGACATTTATAGCATCCCTGTACCAGGAGCCGGTGGCAAAACTTGCTCACAGATATTTGAGGAGGCTGGTTGTGATACACCAGCTAGCCCTAGTTGTGGTGCTTGTTTGGGTGGTCCTCGTGATACATATGCTCGCATGAATGAACCTATGGTGTGTGTGTCGACGACGAACAGGAATTTCCCCGGCAGGATGGGGCACAAGGAAGGGCAGATCTACCTGGCTTCGCCGTTCACCGCGGCGGCTTCAGCCCTCACCGGATACGTCACTGACCCCAGGGACTTCCTGATGTAA</cdnaseq>

Protein Sequence

<aaseq>MASISAASPVAGKAAAFAHKNELAAAAVAPSQQQLQRRVSGRRARSGRVRAVATPARAPRAPSSTGSVKSAMTMTEKILARASERASLEPGENVWVDVDVLMTHDVCGPGTIGIFKREFGEDAKVWDREKVVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLSNFKANPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCNAGAFGQFATGIGNTDAGFVMGTGKALLKVPPTIRFVLDGEMPPYLLAKDLILQIIGEISVSGATYKSMEFVGSTVESLNMEERMTLCNMVIEAGGKNGVVPADQTTFNYLEGKTSVEYEPVYSDAQARFVSDYRFDVSKLEPVIAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFFAAAKVFLASGKKVKVPTFLVPATQKVWMDIYSIPVPGAGGKTCSQIFEEAGCDTPASPSCGACLGGPRDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPFTAAASALTGYVTDPRDFLM</aaseq>

Gene Sequence

<dnaseqindica>1..60#161..301#390..713#837..905#984..1100#1505..1579#1670..1747#1831..1926#2099..2148#2852..2906#2996..3127#3779..3826#3913..4071#4499..4639#ATGGCCTCCATCTCCGCCGCCTCCCCCGTCGCTGGGAAGGCCGCCGCCTTCGCCCACAAGGTTCGCCCCACTCCCCTCTACCTCTCTGGTATCCGTCTTCCCCACCCAAGCGGTTCGCGATGCTAACCCCCTTGCCCTTGCTTGCTGGTGTTTGTCGCAGAACGAGCTCGCCGCCGCCGCCGTGGCGCCGTCGCAGCAGCAGCTGCAGCGGAGGGTGAGTGGGAGGAGGGCGCGTTCGGGGAGGGTCCGCGCCGTCGCCACGCCCGCCCGCGCCCCCCGCGCCCCGTCCTCCACTGGCTCGGTACGGCTTCTCGACCCAGGCTAGGCTGCTGTTCTCGATGTGATTCTCGTGCGGATGCGGATGAGGATGGGACTCTTTGCGGTTTCAGGTGAAGAGCGCCATGACGATGACAGAGAAGATCCTGGCGAGGGCGTCGGAGCGCGCCAGCTTGGAGCCCGGGGAGAACGTGTGGGTGGACGTCGACGTGCTGATGACGCACGACGTCTGCGGCCCTGGCACCATCGGGATCTTCAAGCGGGAGTTCGGGGAGGACGCCAAGGTTTGGGACCGAGAGAAGGTGGTCATCATCCCGGACCACTACATCTTCACCAGCGATGAGCGAGCAAACCGAAATGTTGATATCCTCAGGGATTTCTGTATGGAGCAGAACATCAAGTACTTCTATGACATCAAGGACCTGAGCAATTTCAAAGTATGCCGATCCATTTTCATTATCTTTTCTCCAATTGATAGCTTGTTTGTTTTGTATCAAACCTGTTTTCATGTTCATTTTGAAGAAATTTTTTAAATAAACTGCAATTTGTGTTGTTTGCAGGCAAATCCAGACTACAAGGGTGTTTGCCACGTTGCTCTTGCTCAAGAGGGTCATTGCAGACCAGGCGAGGTACTTCCAGTGAATGTGCTAATGCAGGAATCTGGTGGTTTCATAGGACAGGATTAACCTGCTCCAATTGTTGTCTAGGTTCTCCTTGGTACTGATTCTCATACATGCAATGCTGGAGCCTTTGGCCAATTTGCAACTGGAATTGGAAACACTGATGCTGGTTTTGTGATGGGCACTGGGAAGGCTCTTCTTAAGGTATGTAGAAAGTTCTGATTACTCCGTATCGAATTCAAATATCAGCCTTGATAGTAAAAAGTGGTTCAGATATTGGTTAGTGAGTTCATCTGAATGATGTGTCAGTTCTATGTATGTTAATGTAATAATGGCATTGTAGCAAGCTGCATGCTTTTGACCACTATAAATCAGAACTCAAGATAGATTTCTGGGTGCTGACAGTAGAATTTTTTTTATTCTGGTGCACATACTGCGCCATCTGAATATTATTTCATCCAAACGTAGCATGGTAGACATATGGGATGTATCATGTCAATAGCACTATCCATAGGATAGTTACATTTATAATAGGAATTCTAGGATTCTTTTTGTTCCTTATATTTTATTTAAATATTCTTAATGTGATCTATCAAAATTATTTTCAGGTGCCTCCAACTATCAGGTTTGTATTAGATGGAGAAATGCCACCTTATTTACTTGCAAAGGATCTGATTTTACAAGTAAGACTACAAAATACTTGTATATTTTTCTGTACTTATCTTTCTACCAGCATTTTCTAATAGCTCATCCTCAATAATTGCTAATTGCAGATTATTGGTGAGATTTCTGTATCTGGCGCAACATACAAATCCATGGAGTTTGTTGGATCAACTGTGGAAAGTCTAAATGTATGCTCCGTGCTCATAACTAGATTGATCAATTATTTTCATCTTTCATGGCTTTTAACCTAATATTTCCGCAAACTTGGTAGATGGAAGAGCGAATGACACTGTGCAACATGGTTATTGAAGCTGGTGGCAAGAATGGTGTTGTGCCTGCCGATCAAACTACATTTAACTATCTTGAGGTACTTTAATGGCCTTTAAAATGCTTGGTAATAAAATGAGCGATATTTTTATGCAAATAAAACAACCCAACATCCTTAAGCTTCGAATAAGAAGAAATATTTACAAGAACAAATTTCTAACTTTTACATAATGATAATTATGACTCCATATCGGTCATCCTGGTAACTGCAGGGCAAGACATCAGTTGAATACGAGCCTGTCTATAGTGATGCTCAGGCCAGGTGATTATTGCCTATACCTTCTCTTTTCCTTTTGACTATTCAATACTTCGATATGCGCATTTTCTAGAGTTTTTTGTAATACAGAGCACCTTTTTGCTGTATATTAATCACTTTCAAACTTCATAAATAAAATGCTGCATGCCGATCATTCAGCTAGCCTATTCCTACCGTACACATCTTCATGATATTATTTATCAATACTGCTATTTGCTGGTTTTGCACTGAAGGCATATCATGGTAATGAAATCTAACTGATTGCACTGGAGATTAGCAAGGCTCTCAAGTATCAGATCGTGTTGCTTCAATCATGTAGAAATATTATAGCTAAATTTGGATATTGAGTACTTGAACTGAAAAGAAGAATGTCATATTGCTATATGTAGGGAGAGAAATAATTTTGAAGGTAACTGGTTCTTTGTTTTCTTTGTCGTCTTTAGCTTATCACAATGATGTAGAGCCTACTAGGTGATAACTTGTGACACTAGGTTGTCCTTGTGCAATTATACACTTTTTTTAGATGAATTATACTCTATTTTTTCCTGTATTGTTAGTTGATCTATAAGCTTATGTAGATAAACTGTGGTCCGTTTGTGTCATGTTTTGAATAGTTAAATTGAAACCGCATAAGCATAAGCTGTTGATGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTATACTTGATTTCACTACATTTTTTTCAGATTTGTTAGTGACTACCGGTTTGATGTATCCAAATTGGAGCCAGTTATTGCCAAGGTTTGTTCATATAGTTACTGTTATCTTTTGCAATCTCATCAATTTCATTATACAAAAGAGTCAAAGCTGTTATTTTGGTGGACCTGCAGCCACATTCACCTGACAACCGTGCTCTAGCAAGAGAGTGCAAAGATGTCAAGATTGACCGGGTCTATATCGGTTCTTGTACTGGAGGTAAAACTGAGGACTTCTTTGCTGCTGCGAAGGTGTTCTTAGCTTCGGTAAGAGGCTTGAATCTTGTGGCTTGGTGACATATGACCCAAGTCATTTTGTTTATTTAGTACTATGAGATACTCATTATGTTTTAGAACTTAAGAGGAGGATAATGCCAATGGTTTGTGCTCGTATCCATTTGTTACTATCTAGGGTTGTTAGGTTCTGACTCAAAGAGTGTTGATATGGACCAGGCTTCAGTTGACCTCATTGGTCCCTTGTACATGAGCAGCTGAAATCAATGCAGAAAGGGAATATTGGTTTAAATAGGCACATCTAGAATATTTTAAACATTGAATGCTGAAAGGGTTAATGTGCTACGGTATTATATGATCAAATCGGGTTGGGTTTTGATTGGAATTCAATATGTTGAGTTGTTCTGAGGAAGTTTGTGTGTTTATAGGAGATGGTTAGGTTAATTTCTGCTAATCAGTTATGATTATAATGATCTAGCATCCGCCTTACTGTGATAGACATCCAGCTTGATTGACTCAGTAACTGCAAATTATAGCCAGCACTATTTGTTGAAGCATATTGATCCATCCTGTTTATTTAAATCAATTTCTCTATATACAAACTTAAATCTCATGTTACAGTAATTCTCAAGTCATACTACTCCATGGCTGCTTGACTTACTAAAATTGCTTTCATTAATGCAGGGGAAGAAGGTTAAAGTTCCCACTTTTCTCGTTCCGGCGACACAAAAGGTGATAAATGCAGCAAACAGCAAACACATACTGAAATGATCATCCTGTGGTTTCGATTTAATAATAAGAATGTTAAATCTATGTAGGTGTGGATGGACATTTATAGCATCCCTGTACCAGGAGCCGGTGGCAAAACTTGCTCACAGATATTTGAGGAGGCTGGTTGTGATACACCAGCTAGCCCTAGTTGTGGTGCTTGTTTGGGTGGTCCTCGTGATACATATGCTCGCATGAATGAACCTATGGTAAGTGCCTCCAAATATTTCAGTAAAACAGGAAATGTTGTTTCGTATGAACTTTATCAACATAGTAGAATTTATAGATGTCTTCCTTGAAAGATAAGGTATCATGAACCCTGTCACCCTGGACGAATTTTGTTCTCTATTTAAAGGGACAACAAAAATCTGAATTACTTTCACATTATTGGTGGCTGGCTACGATATTAATTACTACTTGGGTAATCATAGGTGCTAGTCCAAATTAAAGCCGTTGTTTTTGGGAATAACTATGGTAGACCTATAATCAGTAAAGTAAAATGCTCCCTTAGTAGACCATTTTGTGATGAAAAGAAGTCCTTAATGCAAAGGGAATTGCAAGTGTTCTCCAAATTATATCCTGTTGATGCGAGTGGTTTTGTTGATTAACTGATTTCAAAAACGTATTTGGGTGCAGGTGTGTGTGTCGACGACGAACAGGAATTTCCCCGGCAGGATGGGGCACAAGGAAGGGCAGATCTACCTGGCTTCGCCGTTCACCGCGGCGGCTTCAGCCCTCACCGGATACGTCACTGACCCCAGGGACTTCCTGATGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007208