BGIOSGA007221

From RiceWiki
Revision as of 02:53, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007221| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007221, complete gene.| tag = OsI_056...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA007221

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007221, complete gene.

LocusTag

OsI_05644

Ensembl Transcript ID

BGIOSGA007221-TA

Ensembl Protein ID

BGIOSGA007221-PA

Length

6766

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1262248..1269013

Sequence Coding Region

1268638..1269013,1268334..1268428),complement(1267598..1267706,1267241..1267296),complement(1266361..1266416
,1265886..1266024),complement(1265297..1265434,1265151..1265219),complement(1263985..1264113
,1263299..1263376),complement(1262941..1263012,1262546..1262608),complement(1262248..1262355

Genome Context

<gbrowseImage1> name=IndicaChromosome02:1262248..1269013 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:1262248..1269013 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCGCCCACCTCCGCCTCCTCTCCGCCGCGCCGCTCCCGGCGCTCCTCCCCACCCGCCGCCTTCCCGCCGTGCCCACTCCCGCTCTCGCCGCCCGCGCGGCACGCCTCGTCCTCAGCCGCCCGCTTACCGAGCCACAGCCGCCGCGCCTCCCCCGTGGCGCCGCCGCCCGCTGCCGCGGGGTGGCCGTGGCGGGAGCGGATGGGGATGAGCCGGCGGCGGCGGCGGCTGGAACGGCGGGGTTGTGGGAGCAGGTGCGGGACATCGTCGTGTTCGCTGGGCCGGCGCTGGGGCTCTGGATCTGCGGGCCCCTCATGAGCCTCATCGACACCATGGTCATCGGCCAGACTTCCTCCCTCCAGCTCGCTGCCCTAGGGCCTGGAACGGTGTTCTGCGATTACCTCTGCTATATATTCATGTTCCTTTCGATCGCGACCTCCAACATGGTGGCCACCTCCTTAGCTAAAAAGGATGAAGAACTTGCACAGCACCAAGTATCTATGTTGCTGTTTGTTGCTCTTACTTGTGGTTTAGGAATGTTTTTGTTCACCAAGCTTTTTGGGACTCAAGTGTTAACTGTGTTTACTGGATCGGGGAACTATGATATCATTTCTGCTGCCAATACATATGCACAGATTAGAGGCTTTGCATGGCCTGCAGTTCTGGTTGGCTTAGTTGCTCAAAGTGCTAGTCTAGGCATGAAAGATTCTTGGGGTCCCTTGAAGGCATTGGCAGCTGCTAGTGTTATCAATGGTGTTGGGGACCTTCTTCTCTGTTCTGTATGTGGATATGGAATTGCTGGCGCTGCCTGGGCAACTATGGTTTCACAGATTGTTGCAGCTTTTATGATGATGCAAAATCTAAATAAGAGAGGATTTCGAGCTTTTTCATTCACAATCCCATCATCAAGTGAGCTTCTGCAGATTTTTGAAATTGCAGCTCCTGTTTTCATAACAATGACCTCCAAGGTAGCATTTTACGCGTTACTTACGTATTCTGCAACTTCTATGGGAGCAATAACACTTGCAGCCCACCAGGCAAGGATGCTATTGAAATCACTTGTCATGATTGGAGCAATAACTGGAACGACTGTGGGGGCAGTAGGAACACTTGTTCCGTGGCTTTTTCCTAGTCTCTTTACTAATGATTTTATGGTTGTCCAACAGATGCATAAAGTGCTGATTCCATATTTCTGTGCATTATTGGTGACACCTTCAGTGCATAGTCTTGAAGGAACATTATTGGCTGGAAGAGATCTCAGGTTTTTGAGTCAATCAATGGGAGCATGCTTTGGCATTGGAACCTTTCTACTAATGATCATTCGCAACAAATTTGGTAGTTTGCCTGGATGCTGGTGGATACTTGTCTTGTTTCAGTGGGGTCGGTTTGGAAGTGCTTTACAACGGCTTCTTTCTCCAACGGGCATGCTATATAACGAAAACTTCAATAACCATCATGATGAGTATGTCAAGGTGAAGGCCACATAA</cdnaseq>

Protein Sequence

<aaseq>MSAHLRLLSAAPLPALLPTRRLPAVPTPALAARAARLVLSRPLTEPQPPRLPRGAAARCRGVAVAGADGDEPAAAAAGTAGLWEQVRDIVVFAGPALGLWICGPLMSLIDTMVIGQTSSLQLAALGPGTVFCDYLCYIFMFLSIATSNMVATSLAKKDEELAQHQVSMLLFVALTCGLGMFLFTKLFGTQVLTVFTGSGNYDIISAANTYAQIRGFAWPAVLVGLVAQSASLGMKDSWGPLKALAAASVINGVGDLLLCSVCGYGIAGAAWATMVSQIVAAFMMMQNLNKRGFRAFSFTIPSSSELLQIFEIAAPVFITMTSKVAFYALLTYSATSMGAITLAAHQARMLLKSLVMIGAITGTTVGAVGTLVPWLFPSLFTNDFMVVQQMHKVLIPYFCALLVTPSVHSLEGTLLAGRDLRFLSQSMGACFGIGTFLLMIIRNKFGSLPGCWWILVLFQWGRFGSALQRLLSPTGMLYNENFNNHHDEYVKVKAT</aaseq>

Gene Sequence

<dnaseqindica>1..376#586..680#1308..1416#1718..1773#2598..2653#2990..3128#3580..3717#3795..3863#4901..5029#5638..5715#6002..6073#6406..6468#6659..6766#ATGTCCGCCCACCTCCGCCTCCTCTCCGCCGCGCCGCTCCCGGCGCTCCTCCCCACCCGCCGCCTTCCCGCCGTGCCCACTCCCGCTCTCGCCGCCCGCGCGGCACGCCTCGTCCTCAGCCGCCCGCTTACCGAGCCACAGCCGCCGCGCCTCCCCCGTGGCGCCGCCGCCCGCTGCCGCGGGGTGGCCGTGGCGGGAGCGGATGGGGATGAGCCGGCGGCGGCGGCGGCTGGAACGGCGGGGTTGTGGGAGCAGGTGCGGGACATCGTCGTGTTCGCTGGGCCGGCGCTGGGGCTCTGGATCTGCGGGCCCCTCATGAGCCTCATCGACACCATGGTCATCGGCCAGACTTCCTCCCTCCAGCTCGCTGCCCTAGGTACAACGCCTAGCTCCCCTTGCTCGCTACCTAACTAAATTAGTCTATGTCATCTGCGTTTGCTTCCTGCTAATCTCCAAAATGGAACTAGGCGACATTTTGCTAACCGAATTAGCTGAATCTGATGAACTGTGGTATATGAATATCGCGTGCAAAGGCTAGGGTCTTTGCAGCTCAATGTCATGTGGTTGTTGTTTCTTCAATTTCAGGGCCTGGAACGGTGTTCTGCGATTACCTCTGCTATATATTCATGTTCCTTTCGATCGCGACCTCCAACATGGTGGCCACCTCCTTAGCTAAAAAGGTGTACCTTCCTCTTTGTTAGATGAACAACTATAGGCAGGAATATGCTATGCTTGGGCAGTTATCAGAAACATATATTGTTAACTTAGCTACTCTTGATAGTATGATTTACATACTGTTTTATCTGTTAGAATTTTAGTGGTAAAACAAATTTAACATTCCAATTTTGATTGTTGCCAACCTAAGCTACTTAGCTTTATAACTTAGTTCGGCGTGAACAATCTCTCCCTCCCTTTCCTCTATAAGACTATGGAACAAAAGTACAAAAAATGCCTAATAACAAGCTGAAATTGAAAACTTTCGAAGTTAATGTTTTGATTTCTCTTGCATGAACTATACACTTTTTCTTACTACAAACGAGAACATTGCAGCAGGACATACATATGTATATTACTCGGCAATTTGCAGGCCACTCAGAAATTCAGAAACTAAACTGTTTTCAACTATAAAACTCTCTGTATGGCGAGAATATTGGTGGCTTGGTGCTTGGCATGTTACTAGAGCCCTACTTTGTGGAAATTAGTGGTGGTTATAATTTTATGAAAGGTTATTAACTTTGAACAATGAACGCACAAACTTTCATGTCTTTTCTCCGCACTCTATTTATAAGCACAGTTACTATATGCAGGATGAAGAACTTGCACAGCACCAAGTATCTATGTTGCTGTTTGTTGCTCTTACTTGTGGTTTAGGAATGTTTTTGTTCACCAAGCTTTTTGGGACTCAAGTGTTAACTGGTAAGTTGAAACTAAACTGTGCTAATAAGATGAAACTGACTGTCAACCTTGTTTATCATACTTTGAAGAACCTGACTGCATATTGATGGAGAAAACCTGGTGGATTTCTTTCACCACTGGATTATCTCCTTCACTGTTTTTCTCCCTGTTTGGCAGTGCACCTTATTTCTGTTTTTTCCTTTTAATTTGCTTCTCAGATTGAATGCCCTTGTATTTATCATGCTATCTAGAGTTTCACATGTCTCATGTCTGAGTCCACCTACCTTCTTAATTTTACTGCAACCTCTATTTTTATTTTCAGTGTTTACTGGATCGGGGAACTATGATATCATTTCTGCTGCCAATACATATGCACAGGTTTGTACATGTCAGCATTCTCTCATTAATTTCACTGTTTAGGGTGTTTTCATTGTTGCCCTAGTTGAATGAGCAAGAGAAATCATGTTTTTTTTAAGAACACGCAGGAAATCTGCGTATCATTTCATCAAGATAGAGGAAAAAAGGTGGATGGCATTAGATATAAACTCTGACATCCACCCACCCAGAAGTACAACACCAACACCACACACCCACAAGAAGCAAAACAAACCTAGTGCACTAGCTCTACAGCCCTAGACAAAAGATCACGAAGCTTAGAAGCTCCTGCTAGGCACCAAAGGGCGCCCTCACTAGCAATGGCTTGAAGGACATCTGCCATGCTTGGGGTAGCGCCAAGAGAAATCATGTTTGTCTGGCAATTTTGAATTGCTTGTTTCTTTCTTGAATATAACTGTATAAAGCAGTCAAATAGTCAATAAATTTTGAGGATAAACAAATATGGCTAAAAGTTCAATTGCATGCTATCTATGAACTAAACCTCATAGAGCTATACTATAGCTATACATATACAAGGAAGTGGAAACATGATGAAATTTTCTAGTACCTCTGTATGGATACTGAATGATGAGGCACGCTGATTACATTTCCTGCACTGAAGTACAAACACGAGGATGATCCTGACTGCAAACCTATTGATTTCAGAAACCTATGCAAATCCATGGATGCTTCTGACTGCAGGCATATTGCATACCTTGTTCTGTACTATAGGATAATTCTATGCACTATGCTATAGGATGTAAGTTTTTGACTTCCATGTTTTATATGAAGTACATAGATCAATATGTATACTCATTCATTTTCAGATTAGAGGCTTTGCATGGCCTGCAGTTCTGGTTGGCTTAGTTGCTCAAAGTGCTAGGTAAAAACCATGCTCATTCTTCTCCTCTTCTGTTGCACGGGATCTATTTTGTTCTGGAGAAGTTATATTTCTTTTGCCTTCAAATCTATCATGTCTTCTTTCTTTGACCTTTTATTTTGCCAAATTACAGATGCATCTGTTTTGAGTTGTCTTAATGTCTATTCGTCATTGAAATATTCATATTGCCATTTGAACCAACTCGCATGGGCTACATAGTTATTTGGTTGTGATGTTTCTGATAACAATAAACACTTTGAGCTCTTCTATTTGATTTCACATTACAACTACCTTGATTGGAGGCTTCTCATATTATACTGTATGTTTGCTATAACTCAGTCTAGGCATGAAAGATTCTTGGGGTCCCTTGAAGGCATTGGCAGCTGCTAGTGTTATCAATGGTGTTGGGGACCTTCTTCTCTGTTCTGTATGTGGATATGGAATTGCTGGCGCTGCCTGGGCAACTATGGTTTCACAGGTAGGCATACTTTCCAATCACCTCATCATACCTTGCTTCTTGCACATCTTTACTTGAGCATGATTCTTTAGACTTGGCAAGATGTGGATTGCCACCAATGCTTAGCCTTAATAAACACTACCTGATTTTTCTTTGAAACTTGAATCGGATGAAACACCACATTACTAACAAAAACAAATGTTTCTTGATCTTCTAGTAAGATATGCTACCTAGTTAAGTTATAAAGCAATCACTTATCTATTGTAAAATGTTATGTTTTTGATGGAACCACATGCTCATAATTTTATATATTATTATCCATGTCGATCTTTCTTTATGATTTGTCTACTCAACTTGTATGCCAGACATTTAGCTACTTGTTATGCTAAACAAAAATCCAATTTATTTACACAATTGAGTCTTCTGACAACATATTATTTTCATAAATAGCTATTTTTTGACACACACTCAGATTGTTGCAGCTTTTATGATGATGCAAAATCTAAATAAGAGAGGATTTCGAGCTTTTTCATTCACAATCCCATCATCAAGTGAGCTTCTGCAGATTTTTGAAATTGCAGCTCCTGTTTTCATAACAATGACCTCCAAGGTATGCTTTTTTTTTTGTTCTAATATTCCATGTCCTCTCCTCAACTTTACTATACCTAATTATTTGAAACCATTCAGGTAGCATTTTACGCGTTACTTACGTATTCTGCAACTTCTATGGGAGCAATAACACTTGCAGCCCACCAGGTTCATACCTTTTAACTTTTGGTATGCTTACCCATGATGAAAACACAGTGCTACTATGTACTTTCTTCTGTGGATAACATACAAAATAATCTATGCTGTGAAGGTTATGGTTAATGTCCTATGCATGTGCACTGTTTGGGGTGAGCCCCTGTCACAACTGCACAGTCATTCATGCCAGAGTTGATATATGGAGCTAAGTGCAATTTGATGAAGGTACCTATCTAAAGCTCTCAATTTCACGTGAATTTCTGTACTGCATTATTATTGTCCTTAGTGATATATTAATCCAAAGGAATCATGTGTAAAGCTTGATGATGTATGCTTGCACACTTTATATGTTTTTACGCTTTTCTCTGGTCAAGAACTTAGGATAAACCGAACTGATATGCAAAGTTTCCTTCAACAGTGTAATTTTCAGTACATGCTCCTTCTCACATTTCTTCTAAATAAAATGCTGATATCACAAACTAAGCTTATTAAATCATTTAGAATCTTGAATTACATCTGCTGCAAAACTATCCACAAATAAATATCAACTTTATTGGCGGTCAAGGCAGGTCGAATTTAACTGGACAAAAATTATAGCTTTGATACACAGTTAAAAGGCTGAAGGTAAAAGCAAGAGGTCAACTGAGACTCTTGTATTAATCCTGTTCGTTGAAATTAACAAAAGCTTGATCCCATCACTTATTTGCTGCCTCTTAGGACATGAGGCATCTTTACGGTTTACAACTACCATTGAACTAAAATAAATATTTGAATCGGAGTTGTGCATTTGCCATCAAGGGTTTCTATACATTTGCTTGCCATACACATACCTTCTTTTCCTGTACTAGAGTAACAGTTGCTTCTGCTTGTGCTTGTACGCTCAGCATCATTACACATACTTGATGCATCCTGTGCGGCACTGATGGTGCTTTGATTGACTAACATAGTGCATATCTTCTACTGGAATTCTTTTCTACATTAAAGTGCATTTATATTTTTAAGTTCATTACTACAAAGACACTAAAGTCTAAAGGTACCGTTTTATCCAGGCAAGGATGCTATTGAAATCACTTGTCATGATTGGAGCAATAACTGGAACGACTGTGGGGGCAGTAGGAACACTTGTTCCGTGGCTTTTTCCTAGTCTCTTTACTAATGATTTTATGGTTGTCCAACAGGTTTGCTCTATAACTTATAAAATATTCTGCATACTGTTCTGGAAGTGCATTCGATTCTGATTGCTTCTCACTATGCCAGAAACTATCAATACTACCATTTCTTATCTATCAATAGTACCGTTTATCCTTTTAGAATCTAACTCAGTTGCACTGTTAAGAAAAGAAAATTCAGTGCTCCTATATCTGATCTGATGTTAGTCATCTAATTTGGCATCATCTGCTCTATATGATACTTTGGTTGTATCATTTGTGTACACTATGGATTTGTAAATGCTTGCAGAATCTGTTCACTGAATCGGATGATGATTATAAAAGGTTGATTCTGACTCATAGGTCCAGTTAGGGTGGTCCTTATGATCTTAGATAATTACTTTACCTTCAATTTATATACATTTAGTTTCCTGTGCTCTATAGAGAAATAGAATTTTACTTGCATATTATTGTAAAATAAATTTACTTGCATATTATTGCGCATGTCTCCTATGACGTGGCCTTGGCTTAACTCAGTCTATCTGCAGAAAGTTTTATGCTTTATTTTCACGACCCCCAGTCTCAAATGCTTTCGATTTTGTCTAGAACTTACTGACAGTCCATTACCCTGTTGACAGATGCATAAAGTGCTGATTCCATATTTCTGTGCATTATTGGTGACACCTTCAGTGCATAGTCTTGAAGGAACATTATTGGTAAGCTGATATATTTGTTTTGGCTGACTTTTAAAGCAATTATCCTGGAAAGTACATTTGGAGTCTGGGAAAACCTTGTCAAAATGAATTTACTTGTTCCAAGTGCCATTACTTCCCTAGTAAGCATGGCTCAAGGCACTAGGTTTCTAGCAGTTTAACACTGGGAAGTGGGGATCATATTTTACGTTTTATTGGAGTAGATAAATAGCACATTAATGCAAAGTCGAATATGGCACGTGCTGGAAAAATGTGATGACATCCCTTGGTACTTTCTCCCTATTCTCAGGCTGGAAGAGATCTCAGGTTTTTGAGTCAATCAATGGGAGCATGCTTTGGCATTGGAACCTTTCTACTAATGGTATGACCGTATGACTGTTTCCTTTCTTTCTCCTTTGGTGAGGTACTGATGTTAGATATAGGTTCTTTAGATCGATGCTAGATGGAGTTTTTGTCCCTACTTCAATTATGTTGAATGAGCTTGAGAAAAAAAAAAGCATTGGTACTGTGAACATTGTATCTTCTTCCTACTTTTGAATGCTGTCACTCAGTTCATAAAGCTCTGTGATGGCTGTCTAGCAACTAAAAGAACTTAAGTCCAAAATTTGAAAATCCTTTAATCTTCTTTGTTGTTCAAATAACAATAGTCACATCCTAATGATCGACTTCTCTGATCTCGTTTCTTCTTAACAGATCATTCGCAACAAATTTGGTAGTTTGCCTGGATGCTGGTGGATACTTGTCTTGTTTCAGTGGGTAAGGCCATCTGACCATTTCAATATATCAAGTTCTTTTTCTCATATTTGTATCCTTAGTTCCCTACCAAAGATAACAGACTATCGTTTCGAGCCTTATTTTTTGCATTATCTTACTTCTCACTATATAATAATGTCTCGCTACTCCAAATGTTTCCTGGCCACATTTTAATACTGTTTCCATTTTCCAGGGTCGGTTTGGAAGTGCTTTACAACGGCTTCTTTCTCCAACGGGCATGCTATATAACGAAAACTTCAATAACCATCATGATGAGTATGTCAAGGTGAAGGCCACATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007221

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA007221&oldid=60773"