BGIOSGA007229

From RiceWiki
Revision as of 02:53, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007229| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007229, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA007229

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007229, complete gene.

LocusTag

OSJNBB0088N06.15

Ensembl Transcript ID

BGIOSGA007229-TA

Ensembl Protein ID

BGIOSGA007229-PA

Length

2382

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1172277..1174658

Sequence Coding Region

1174498..1174658,1174278..1174382),complement(1174098..1174149,1173905..1173997),complement(1173173..1173697
,1172600..1173082),complement(1172277..1172513

Genome Context

<gbrowseImage1> name=IndicaChromosome02:1172277..1174658 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:1172277..1174658 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAAGAGGAGACCACCTGCTGATGAAGAACAGCAATGCTGCTGCAGCTGCAGCTGCTGTCAATGGAGGTGGCACCAGTTTGGATGCTGCATTGAGGCCTCTAGTTGGTTCAGATGGCTGGGATTACTGCATCTACTGGAGGCTCTCTCCTGATCAGAGGTTCTTGGAGATGACAGGATTCTGCTGCAGCAGTGAGCTTGAAGCACAGGTCTCAGCACTGCTGGACCTGCCTTCTTCAATCCCACTGGACTCCTCCTCCATAGGGATGCATGCGCAGGCATTGCTGTCGAACCAGCCGATCTGGCAGAGCAGCAGTGAGGAGGAGGAGGCTGATGGCGGCGGTGGCGCCAAGACGCGGCTGCTGGTCCCCGTCGCCGGCGGCCTCGTCGAGCTCTTCGCGTCGAGATATATGGCGGAGGAGCAGCAGATGGCGGAGCTTGTCATGGCGCAGTGCGGCGGCGGCGGCGCCGGGGACGACGGTGGGGGGCAGGCGTGGCCGCCGCCGGAGACGCCCAGCTTCCAGTGGGACGGAGGCGCCGACGCGCAGAGGCTGATGTACGGCGGCTCGTCGCTGAACCTGTTCGACGCCGCCGCCGCCGACGACGACCCGTTCTTGGGTGGTGGTGGTGACGCCGTGGGCGACGCGGCGGCGGCGGCGGGCGCGTGGCCGTACGCGGGGATGGCGGTGAGCGAGCCGTCGGTGGCGGTGGCGCAGGAGCAGATGCAGCACGCGGCGGGCGGCGGCGTGGCGGAGTCCGGGTCGGAGGGGAGGAAGCTGCATGGCGGTGACCCGGAGGACGACGGCGACGGCGAGGGGCGCTCCGGCGGCGCCAAGAGGCAGCAGTGCAAGAACCTCGAGGCGGAGAGGAAGCGGAGGAAGAAGCTCAATGGCCACCTCTACAAGCTCCGCTCGCTCGTCCCAAACATCACCAAGATGGATCGCGCGTCGATTCTTGGAGACGCGATCGACTACATCGTGGGGTTGCAGAAGCAGGTGAAGGAGCTGCAGGACGAGCTGGAAGACAACCATGTCCACCATAAGCCGCCCGACGTGCTCATCGACCACCCGCCGCCGGCGAGCCTCGTCGGGCTCGACAACGACGACGCCTCGCCGCCCAACAGCCACCAACAGCAGCCGCCGCTCGCCGTTTCCGGCAGCAGCAGCAGGAGGAGTAACAAGGACCCAGCAATGACCGACGACAAGGTCGGCGGCGGCGGCGGCGGTGGGCACCGGATGGAGCCGCAGCTGGAGGTGCGTCAGGTGCAGGGGAACGAGCTGTTCGTCCAGGTGCTCTGGGAGCACAAGCCCGGCGGGTTCGTCCGCCTCATGGACGCCATGAACGCGCTCGGCCTCGAGGTCATCAACGTCAACGTCACCACCTACAAGACCCTCGTCCTCAACGTCTTCCGCGTCATGGTGAGGGACAGCGAGGTGGCGGTGCAGGCGGACAGGGTGAGGGACTCGCTGCTGGAGGTGACGCGGGAGACGTACCCCGGCGTGTGGCCGTCGCCGCAGGAGGAGGACGACGCCAAGTTCGACGGCGGCGACGGCGGGCAGGCTGCGGCGGCGGAGGCGGCGGCCGGTGGAGAGCACTACCACGACGAAGTCGGCGGCGGATACCATCAGCACCTGCATTACCTCGCGTTTGATTGA</cdnaseq>

Protein Sequence

<aaseq>MGRGDHLLMKNSNAAAAAAAVNGGGTSLDAALRPLVGSDGWDYCIYWRLSPDQRFLEMTGFCCSSELEAQVSALLDLPSSIPLDSSSIGMHAQALLSNQPIWQSSSEEEEADGGGGAKTRLLVPVAGGLVELFASRYMAEEQQMAELVMAQCGGGGAGDDGGGQAWPPPETPSFQWDGGADAQRLMYGGSSLNLFDAAAADDDPFLGGGGDAVGDAAAAAGAWPYAGMAVSEPSVAVAQEQMQHAAGGGVAESGSEGRKLHGGDPEDDGDGEGRSGGAKRQQCKNLEAERKRRKKLNGHLYKLRSLVPNITKMDRASILGDAIDYIVGLQKQVKELQDELEDNHVHHKPPDVLIDHPPPASLVGLDNDDASPPNSHQQQPPLAVSGSSSRRSNKDPAMTDDKVGGGGGGGHRMEPQLEVRQVQGNELFVQVLWEHKPGGFVRLMDAMNALGLEVINVNVTTYKTLVLNVFRVMVRDSEVAVQADRVRDSLLEVTRETYPGVWPSPQEEDDAKFDGGDGGQAAAAEAAAGGEHYHDEVGGGYHQHLHYLAFD</aaseq>

Gene Sequence

<dnaseqindica>1..161#277..381#510..561#662..754#962..1486#1577..2059#2146..2382#ATGGGAAGAGGAGACCACCTGCTGATGAAGAACAGCAATGCTGCTGCAGCTGCAGCTGCTGTCAATGGAGGTGGCACCAGTTTGGATGCTGCATTGAGGCCTCTAGTTGGTTCAGATGGCTGGGATTACTGCATCTACTGGAGGCTCTCTCCTGATCAGAGGTATGTGATTGATTACTTGGCATATCATATCATATCATGCATGCAAAGTAGCAATTACGGTGTGATTTATTATCTCTGTAGTGATATACAACCATTAACACAAAATTAATGGCAGGTTCTTGGAGATGACAGGATTCTGCTGCAGCAGTGAGCTTGAAGCACAGGTCTCAGCACTGCTGGACCTGCCTTCTTCAATCCCACTGGACTCCTCCTCCATAGGGTAAATTGAATGATTAATCAATCAATCGATACGTGTTCTGATTACCTGCAAAATTGATGGTTTCTTGTCTAGTAACTCTGAACATTTGTATGCTTGGTGAATCTGAATCTCTGTCACTATCCATCAAGGATGCATGCGCAGGCATTGCTGTCGAACCAGCCGATCTGGCAGAGCAGCAGTGTAAGCAAGATTCATCACTGAACCCAGTAGCTGAATCTGAATCTGAATCTGAATATGAATCTCTGTCACTGATGAGGTGTGTTGCTTGGATGCGTGGCAGGAGGAGGAGGAGGCTGATGGCGGCGGTGGCGCCAAGACGCGGCTGCTGGTCCCCGTCGCCGGCGGCCTCGTCGAGCTCTTCGCGTCGAGATATGTGAGTGGTCGGTCGTTTGATTGGTTAGAGGAGTAGTAGTTAGAGAGGATGCGGCTGCGGCTGCGGCGGCGGCGGTGGTGGCGGCGGCTCACGCCATCCGCGTGAGCCAACGAACGCCGGAGAGCTTGCGGTTAGCTGCACGCAACGGCCTTTGCGTTTTGCATGGATGGGTTATATAGATTTGTGGGTTGATCGGTGTTGGTGCAGATGGCGGAGGAGCAGCAGATGGCGGAGCTTGTCATGGCGCAGTGCGGCGGCGGCGGCGCCGGGGACGACGGTGGGGGGCAGGCGTGGCCGCCGCCGGAGACGCCCAGCTTCCAGTGGGACGGAGGCGCCGACGCGCAGAGGCTGATGTACGGCGGCTCGTCGCTGAACCTGTTCGACGCCGCCGCCGCCGACGACGACCCGTTCTTGGGTGGTGGTGGTGACGCCGTGGGCGACGCGGCGGCGGCGGCGGGCGCGTGGCCGTACGCGGGGATGGCGGTGAGCGAGCCGTCGGTGGCGGTGGCGCAGGAGCAGATGCAGCACGCGGCGGGCGGCGGCGTGGCGGAGTCCGGGTCGGAGGGGAGGAAGCTGCATGGCGGTGACCCGGAGGACGACGGCGACGGCGAGGGGCGCTCCGGCGGCGCCAAGAGGCAGCAGTGCAAGAACCTCGAGGCGGAGAGGAAGCGGAGGAAGAAGCTCAATGGCCACCTCTACAAGCTCCGCTCGCTCGTCCCAAACATCACCAAGGTATCTTACCTCCTCGTCGATCGCCATGGCCATGAACGGATCAAAAGCTTCTTCAAATCGATTTCCGTTTGATTTTGCAACGAATCGTAGATGGATCGCGCGTCGATTCTTGGAGACGCGATCGACTACATCGTGGGGTTGCAGAAGCAGGTGAAGGAGCTGCAGGACGAGCTGGAAGACAACCATGTCCACCATAAGCCGCCCGACGTGCTCATCGACCACCCGCCGCCGGCGAGCCTCGTCGGGCTCGACAACGACGACGCCTCGCCGCCCAACAGCCACCAACAGCAGCCGCCGCTCGCCGTTTCCGGCAGCAGCAGCAGGAGGAGTAACAAGGACCCAGCAATGACCGACGACAAGGTCGGCGGCGGCGGCGGCGGTGGGCACCGGATGGAGCCGCAGCTGGAGGTGCGTCAGGTGCAGGGGAACGAGCTGTTCGTCCAGGTGCTCTGGGAGCACAAGCCCGGCGGGTTCGTCCGCCTCATGGACGCCATGAACGCGCTCGGCCTCGAGGTCATCAACGTCAACGTCACCACCTACAAGACCCTCGTCCTCAACGTCTTCCGCGTCATGGTAGTACGCCCCGCTCGCCGCCGCCATGGCCATGAACGCGAGCTCGCGAGCTGACTACTCCGAGCTGGTTGGTTTCTGCATTGCAGGTGAGGGACAGCGAGGTGGCGGTGCAGGCGGACAGGGTGAGGGACTCGCTGCTGGAGGTGACGCGGGAGACGTACCCCGGCGTGTGGCCGTCGCCGCAGGAGGAGGACGACGCCAAGTTCGACGGCGGCGACGGCGGGCAGGCTGCGGCGGCGGAGGCGGCGGCCGGTGGAGAGCACTACCACGACGAAGTCGGCGGCGGATACCATCAGCACCTGCATTACCTCGCGTTTGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007229