BGIOSGA007247

From RiceWiki
Revision as of 02:54, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007247| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007247, complete gene.| tag = OJ1442_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA007247

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007247, complete gene.

LocusTag

OJ1442_E05.19

Ensembl Transcript ID

BGIOSGA007247-TA

Ensembl Protein ID

BGIOSGA007247-PA

Length

2040

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:909998..912037

Sequence Coding Region

911928..912037,911189..911251),complement(910903..910983,910618..910780),complement(909998..910291

Genome Context

<gbrowseImage1> name=IndicaChromosome02:909998..912037 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:909998..912037 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGGAGGCGGAGACCCCGTTGACGAGTTCCTCATCGGCGGCGGCGGCGAGGACGGCGACCTCGGCGTCTTCTGCGACGGCGTGCCGACGCTGCCCTGCGATGGAGGACTTGGGATTGATGATGTCAGTGGAGATACTTGTTGCCTTGACCAATCTGTTTTAGGGAAAAGAGGTAGAGATGAATCATCATCATCTGGTCCAAAGTCCAAAGCTTGCCGTGAGAAAATTCGGAGGGATAGACTGAATGACAGGTTCCTTGAGTTATCTTCCGTTATCAATCCTGACAAGCAAGCTAAGTTGGATAAAGCAAATATCTTGAGTGATGCAGCTCGTCTGTTGGCAGAACTCAGAGGCGAGGCAGAAAAGCTTAAAGAATCTAATGAGAAGCTACGAGAAACAATCAAGGACCTTAAGGTGGAGAAGAATGAACTCCGTGATGAGAAAGTTACTCTGAAGGCAGAGAAGGAGAGGCTGGAACAGCAAGTTAAAGCATTGAGTGTTGCTCCTACAGGATTTGTTCCTCATCTCCCTCATCCAGCTGCATTCCATCCCGCTGCATTCCCTCCATTTATACCACCTTATCAAGCTCTGGGCAACAAAAATGCTCCTACGCCCGCAGCATTCCAAGGGATGGCAATGTGGCAGTGGTTGCCTCCAACTGCTGTGGACACAACTCAAGATCCAAAGCTTTGGCCACCAAATGCTTAA</cdnaseq>

Protein Sequence

<aaseq>MDGGGDPVDEFLIGGGGEDGDLGVFCDGVPTLPCDGGLGIDDVSGDTCCLDQSVLGKRGRDESSSSGPKSKACREKIRRDRLNDRFLELSSVINPDKQAKLDKANILSDAARLLAELRGEAEKLKESNEKLRETIKDLKVEKNELRDEKVTLKAEKERLEQQVKALSVAPTGFVPHLPHPAAFHPAAFPPFIPPYQALGNKNAPTPAAFQGMAMWQWLPPTAVDTTQDPKLWPPNA</aaseq>

Gene Sequence

<dnaseqindica>1..110#787..849#1055..1135#1258..1420#1747..2040#ATGGACGGAGGCGGAGACCCCGTTGACGAGTTCCTCATCGGCGGCGGCGGCGAGGACGGCGACCTCGGCGTCTTCTGCGACGGCGTGCCGACGCTGCCCTGCGATGGAGGGTACGCTTGATCCGTTTCTGTTTCTTTTTGAGGAGTAAATTGAGCTCGAATTGGGGTTTGTTGCATGCGTTTTGTAGTGTTTGCTGTCCTTGTCGCTGCAGGTTTGTTGCTTAAAAAAATTGCGGTGATGTTTGATACTACTTAGGAGTATTTTTTTTTCTTGAGAAAAAGAGGGGGATTTTCACATGTACACCGTCTAGTTGGTTGATTGATTGATCGATTAGGTTATAGTAGTATATGAACGAAGAATTGTGATTGCTAGCTGATTTATAGGCGGGTTCAGCAAATGCTGCTACAGTACCCATCGATTGGAGGGCAAAAACCGTAAATTACAATAGCGTGTACTAGTAGTTCTGGTGCTGTTGGTACCATTCCAATCGAGCTTATTGATATCAATTAGCAATTTGATTGCGCCCTTATTGGAAAAGTGGGCGTCTGCGTGATAAACACCTAGTTGCCAACTACTTGCCATAGGATATGTTACATTGTTCTTTGCTCTCTGAAATATCTACACAAGTATGATTCTGAATGTAAAATGTTAGCTTTGAAGCACTTGCTAATGGAAATATGTATGGCAGAATCTTTTGTTGCCTACCTGAGCAGCTATACCTTGCTTGAATAATTTTTGTTCCCATCAACTGTTATTCACTTGGCGCTTACTTTGTAATTATTGCAGACTTGGGATTGATGATGTCAGTGGAGATACTTGTTGCCTTGACCAATCTGTTTTAGGGAAAAGGTCTGTCACTAGTTTCTGAATCTTACTTTCTTATGATTTTCTAAGTATCTTTGCTTACATACCTTGAACTGTTACTGATAGTTATAACTTTTCAATCATTACGGTATTACCATGAACAAATTTAACACAGTATTTAGACATATTATTCATTTTATTGCTGGGACCATATTTGATTTTCATTTGTAATGGTTCTGATTTTGTGCAGAGGTAGAGATGAATCATCATCATCTGGTCCAAAGTCCAAAGCTTGCCGTGAGAAAATTCGGAGGGATAGACTGAATGACAGGTGTGGGAATTAACAACGTGCCTCTTCGCCATCCCTCCATGTAGAAAAGATGAATGCACTCACACATGCATACGTGATTTTCCACATATGTCTCAGCTGTGATCTATTTTTCTCAATCGCAGGTTCCTTGAGTTATCTTCCGTTATCAATCCTGACAAGCAAGCTAAGTTGGATAAAGCAAATATCTTGAGTGATGCAGCTCGTCTGTTGGCAGAACTCAGAGGCGAGGCAGAAAAGCTTAAAGAATCTAATGAGAAGCTACGAGAAACAATCAAGGACCTTAAGGTATTTTGTTCTCACAATTTTTTACCTTCTACCCCTGGATTAGAATGCCTGATGCCCTCCACAGTCATGTCCTGTGTCCTAAAATGATATATCGCATGCACTGTTCCCAGGAACAGAGTTCAAGCAGACACAACAAAGAAAACTTTTCTAAAGTGCGCCGAGTTTGATTTCTGTGCAATTGTTGGTTGGTTCACCAGATAATAATTACTAGGTTCACTACCTTCACTAATGGCAAGTCCGGAATTCATTGGTCAGACCTCCCATGCATCTACGAGAAGTCTTGATCTGACCAAACATGTATGTTTTATGGCTCTATTATTTTTCAGGTGGAGAAGAATGAACTCCGTGATGAGAAAGTTACTCTGAAGGCAGAGAAGGAGAGGCTGGAACAGCAAGTTAAAGCATTGAGTGTTGCTCCTACAGGATTTGTTCCTCATCTCCCTCATCCAGCTGCATTCCATCCCGCTGCATTCCCTCCATTTATACCACCTTATCAAGCTCTGGGCAACAAAAATGCTCCTACGCCCGCAGCATTCCAAGGGATGGCAATGTGGCAGTGGTTGCCTCCAACTGCTGTGGACACAACTCAAGATCCAAAGCTTTGGCCACCAAATGCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007247