Os09g0395300

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Revision as of 07:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0395300| Description = Similar to CDPK substrate protein 1| Version = NM_001069632.1 GI:115479006 GeneID:4346973| Length = 7672 bp| Defini...")
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Gene Name

Os09g0395300

Description

Similar to CDPK substrate protein 1

Version

NM_001069632.1 GI:115479006 GeneID:4346973

Length

7672 bp

Definition

Oryza sativa Japonica Group Os09g0395300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14411926..14419597

Sequence Coding Region

14411926..14412128,14413047..14413888,14413990..14414066,14414656..14414701,14414841..14415084
,14418440..14418512,14419481..14419597

Expression

GEO Profiles:Os09g0395300

Genome Context

<gbrowseImage1> name=NC_008402:14411926..14419597 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:14411926..14419597 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaatggtgcgggagctcgagttgatgacgagctggagcaacagcatggggcgacaccgctacccaacgcgcatcctcgtcgattccttcgggcataagtgcagtgcctctgacaagggtgtgtggacctcctgcagcattcgcgcacccttgcaaggacgcggctccttccgacgtggcgcgaatattcgctttgggagcttgccgagcagcgcggcggtggcgacgtcggggggagggcgtggcggcggcggggtggtggtgggaggaggaggaggggacccgtggcggaggctggatgggtccacggcgtcgacggagttgtcgctgtcgccgccgccggcgcaggcggcgggtgggggaggtggtggtggtggagcggacgcgctgccgtggcggcaccgaccttcgccgccgtcgtcggcggtggccaccacgtctgccgccgccgcggcggcgctgatggcgccgatgatgctgcagccgctcgacgccggcggcggcgcgtcggcgccgccgccgccgatccgcgggatacctatctacaacggccccggcgggttcccgttcctgcagccgtcgcccaccgccggcgacgtcggccaccaccaccaccaccaccccaagatgggattctacagctcgtaccaccacccatccacgtggccctccacgtcgccgtccccgctcgcggcgccgccgggcgccgcgtcgtcgccgctcgaccccacggcggcgttcctctcctccccccaccaccggatgctgtccgccgcctcggggaggctcaacggcatgctctccgtctccgacaccctccgcagctacggcgtccccggcgccgccgcccccggcgtcatcggcggcgcgcaccaccaccaccaccacctccacggcggccagccgttcgtcggcgccctcgcgtcccgcttcatgcccaagctccccgccaagcgcagcatgcgcgcgccgcgcatgcgctggacgagcaccctccacgcccgcttcgtccacgccgtcgagctcctcggcggccacgagagggcgacgcccaagtcggtgctggagctcatggacgtcaaggatctgacgctagcgcatgtcaagagccacctccagatgtatcgcaccgtgaagagcactgacaagcctgcagcctcttcagggccggcggacggcggctccggcgacgaggagttcgccggcggcgggcaggcggcgtcgggcggcggcgacagcatgtgcctgaggggtggcggcggcggcggggtggccgcggcggcgttcgcggagcacggccggtcggcgtcggagggcgccgccagctcggtcggcggcggcggcggcggcgacatggaccagtcgtcggccggcaacaccagcaccaccaggtggagcaactcctcaagggacccatggctgtcgtccaattcttgcaacatggacgcccatcgctccgtaggattgtcttctcctattgaggttcttgcacttcctttagcctcattgatcatgtcagatactgcctacctgttcttttccagcaaccatggccggtgtgaaccggcctctcttgaccagaaactagcagatatctga</cdnaseq>

Protein Sequence

<aaseq>MAMVRELELMTSWSNSMGRHRYPTRILVDSFGHKCSASDKGVWT SCSIRAPLQGRGSFRRGANIRFGSLPSSAAVATSGGGRGGGGVVVGGGGGDPWRRLDG STASTELSLSPPPAQAAGGGGGGGGADALPWRHRPSPPSSAVATTSAAAAAALMAPMM LQPLDAGGGASAPPPPIRGIPIYNGPGGFPFLQPSPTAGDVGHHHHHHPKMGFYSSYH HPSTWPSTSPSPLAAPPGAASSPLDPTAAFLSSPHHRMLSAASGRLNGMLSVSDTLRS YGVPGAAAPGVIGGAHHHHHHLHGGQPFVGALASRFMPKLPAKRSMRAPRMRWTSTLH ARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKSTDKPAASSGPA DGGSGDEEFAGGGQAASGGGDSMCLRGGGGGGVAAAAFAEHGRSASEGAASSVGGGGG GDMDQSSAGNTSTTRWSNSSRDPWLSSNSCNMDAHRSVGLSSPIEVLALPLASLIMSD TAYLFFSSNHGRCEPASLDQKLADI</aaseq>

Gene Sequence

<dnaseqindica>1..203#1122..1963#2065..2141#2731..2776#2916..3159#6515..6587#7556..7672#atggcaatggtgcgggagctcgagttgatgacgagctggagcaacagcatggggcgacaccgctacccaacgcgcatcctcgtcgattccttcgggcataagtgcagtgcctctgacaagggtgtgtggacctcctgcagcattcgcgcacccttgcaaggacgcggctccttccgacgtggcgcgaatattcgctttgggaggtatgagactacgctccatggtggagcgttgggcgtgaccttagtgtgcgcatatgtaagctgtatgcgtacgtataaatgttgagcttgcagtacatgtatacttgtttttttcttcttttttatgaggtcctttaattccattgtctgtattatttatgctagtatggaggatgatggtggcagtgacataaagtatacaaaaagcatagtatagtatacgtatggaaacaaaagcatgctacctttgactccacttgcattgcctgctaactgccattatttaaggaatacatggttgaatgcctgcctaaacatcaagataacctcacattctcctctctctctctcctaccttgcaattaagggtagcagcagtactctcctcactgctggctgactgctcccattttctctctctactctctctctctctctctcctctattccttttatacttgttgttggtagctaggagtatagcaggacagcacaaggaaccaattcatgcatatatccctggtgtctctcatgcatgttagtgtgaagaaagaagaagcttgagagagaagagagagttagagagagaaagtagagtgtttgtagagagagaaagtggtgtgtgtactagtagtaactccaagccagtgctagagacagagatacaaaaaggagacatcatccttctcttggccaaagcaagcaaccaagcaaagcttcctcttcttctccaagaactccaagaaccttctccttcatcttctccaccatgattccttccatcgcatgagctccatctccggcgtgtcgatcgagatcaccgttgctgctgccgaggtggagaaggaggtgtttgatcgatcggtcgatggaggcgagctcggcggcgacgccaccggacctgtcgctgcacatcagcttgccgagcagcgcggcggtggcgacgtcggggggagggcgtggcggcggcggggtggtggtgggaggaggaggaggggacccgtggcggaggctggatgggtccacggcgtcgacggagttgtcgctgtcgccgccgccggcgcaggcggcgggtgggggaggtggtggtggtggagcggacgcgctgccgtggcggcaccgaccttcgccgccgtcgtcggcggtggccaccacgtctgccgccgccgcggcggcgctgatggcgccgatgatgctgcagccgctcgacgccggcggcggcgcgtcggcgccgccgccgccgatccgcgggatacctatctacaacggccccggcgggttcccgttcctgcagccgtcgcccaccgccggcgacgtcggccaccaccaccaccaccaccccaagatgggattctacagctcgtaccaccacccatccacgtggccctccacgtcgccgtccccgctcgcggcgccgccgggcgccgcgtcgtcgccgctcgaccccacggcggcgttcctctcctccccccaccaccggatgctgtccgccgcctcggggaggctcaacggcatgctctccgtctccgacaccctccgcagctacggcgtccccggcgccgccgcccccggcgtcatcggcggcgcgcaccaccaccaccaccacctccacggcggccagccgttcgtcggcgccctcgcgtcccgcttcatgcccaagctccccgccaagcgcagcatgcgcgcgccgcgcatgcgctggacgagcaccctccacgcccgcttcgtccacgccgtcgagctcctcggcggccacgagagtacgcccccgccatcatcgtcgtcgtcctcctcctccttctcaccaccatcatcaacgagctcgatcaatctgatgagaatccaatcttgttcttggcaggggcgacgcccaagtcggtgctggagctcatggacgtcaaggatctgacgctagcgcatgtcaagagccacctccaggtatcccgccattgccgaccaattctcacagctcgatcgatcgatcaaacaccactcaccactgcaccatctctctctttctctctctcgatttcgattccattcagcttctgttcttgatcatcttgtttgggtgagacaaagatgccaatgcagtaactcctgagttagtgaagaaactgccattcttgggagcagagagagagagtgtgtgtgtgacatgtttggggatgtgtgtgcaagagagaagagagagagagaggggaaaaaagttgccatcattacacaataatgcattgcatctgcatctgtgctactagctccttccttagctctagtcatactagcgtatatgtgcacggcccaaagcactctcacacacaaacacaagagagagagagagagagagaagaagaagatgagagatgagagagagtaggacatattttgtgtgtgtttctttgctgcttgtcttttgcaatggcttcaacctcctggtttcattttgatctcacaaaaaatgtgtgtgtgtgtgtaaatatatatattgatcttctttttgttggacttttgtgttttattactgcagatgtatcgcaccgtgaagagcactgacaagcctgcagcctcttcaggtgattttttttaccatggcagctactagtagtagtagtagtagctaatttagctaagctccattttgcttttctttttttttggcgttgtgcattgcgttttacattacattgttgctatggtttttttgacgtgtagggccggcggacggcggctccggcgacgaggagttcgccggcggcgggcaggcggcgtcgggcggcggcgacagcatgtgcctgaggggtggcggcggcggcggggtggccgcggcggcgttcgcggagcacggccggtcggcgtcggagggcgccgccagctcggtcggcggcggcggcggcggcgacatggaccagtcgtcggccggcaacaccagcaccaccaggtggagcaactcctcaaggtacacacatggcagagttgcatttcaagtctttcagattaattatatatctacattgttatgccatctttaattaattaaaaatgaaattaatcaatcagaatgtcatgagatgatgatgatgatgataataatactaggataggaagaggatgatatgatggatgggtgtgctatgtgtgtttttaagtgtgttttagcttagaaccaaaggcaacaccaacaaactttggcatgcattgatgatgtatctaaatatgagttagtgacatgcaaaattaacctgccaagtacaacctctatttattaattcccaaaaaaatctcatggaggagaagggagagagagagatagtagtaatgtgtggtgatgcatggctaaaaaagcttagcaaaagaatgttttgggggcacacacacacacacctggagagggagttgcctatgtttaggtggccaatgttgttatgtcacacaaaagaccaaaaagtcacacaccccatggcttggcctcctcctccccccttgacctgtgcagttagctaggcttcttctcttctctccctctgtgtttggtttttgtggagctaaaaacattttaaaaatcttgcaaacattgtgtgtaaaaataggttcttgggctctgcccattgtcctctagcttctctcaaatctctctctctctctctctctctctctctctctttctcaaacctagggaggggagggttactcaggcagggctccattatcatttcttatcaatgcatggctctgattccagggggatggggctttgacctgacatgccctattgcctaggaatatgtaaccaaggacttgctgcattcttggttctttctccctctctcaccagtctcttcaatgcccttttcttccacctcttgggcaattattagcatggatggagctcaccttttcactctaccctctagctgtgattaaatcattgactaatcctaattcataaatataagggattcaactatgtaactagatgtactagatcctagtattactagtgtgttttgattctgttaggaggagtgattagcgtttgtcgtaagtactagtattaaactataggggattagtgtagatcatttttttaaaaattagtgagtgtgcttgggcagattttactccagccattggcgtgaaaactttgatctttgggcagcttggaagcaagtacagttcaacctgtccttggctgcattcgctgctttttctttctcaggactcactgcaactttcttgccatccccaacacctccctttcggtcgtgtttgatcagttgcattgctggtttcttcgccgctttaatttctccatctttcttctgttccttattggctaagtaaaaaatcattctcagcaatcaagttttgaaattcaaattagcttcaggttttatctatctaataattctctgactagttctctttctttcaagacctgttcttgttcagaactcttatgcagttgagagttcagttgttcatggaagtaatggcaatgcctggtctagtctttgagcagtatcctccttatgctcttgattttccttcactttagccgtttcagtcaaactttggggacaaattaaagtcagctggtcaagtgcatacataccacgtcatattttttagatgaatccattgtagtattaaatactagtgacaaaaaaatataactaaatggcattaaattgcaaccttcttccccaaaataattgggcacaactaccttgcttgcatatgctttatagtactcctacttattacttccttgaatccatgaggattccaggaatttggtcaggtcaaatgtccaggaggaattaggctatctttttttatcttcttctttttcttctaggtagtaggatcgttgtgcacatataaacaaaacaaaatagaaatttaagaggaaaccctcccaaaaaaaatacgactatcaattatgagtgattttacagttcttgaggaggtacaatgatacattttctattttaaaattcagtaactttgatactatgaggtacagaaatttgcacaaaaaaaatttggtacctctcaagtacttaaaatatcttatcaattatatttcagcaatgttgtcgttgctcgagttgtgcaaaaacatttctgatgaacaagtggagatgtatgcatatttagagagggaaacacatgcattttttaatatacattctcatgacaaattttggtgttctcgtctcattttagtctagcttagattaatggcatccatatattggtgaactgaaacagattgtatatgtccagtcttgaacaaacttcattatacaatgcataatcagaaaagatacagacatatattggcagatcacataaagtggtgtatctatgattgggtggtattttggacatacaaagtctactggtccctcatttgttaacagcatacatttgttcctatcaagacaaaagcactttacaacagtttggtagtaagttggtgttatgtgcgtgtctatttagatagagtggtagtaaaggaaggacactttttcttgatataccaaaatcacacataaaaaagaagtgtcattttcatgatcaacatgtggggtatgaacaaaaatgttctcccccctccaaccaacattgaagtcatcacacataaaaagcaaaaacatttaacaataatacatgcagacacatgtgcatgcatgtgtggatcacgcaaggacatactaattcaattaggtattcacaattaattagtgcaggaaatgacatgtaattacaattatatatgcacaacgatccttgtgtatttgtgtgacccattgtagtagcatttgattcctttcttgtgcctttctctacattgaattcgatctttgccaacagcggcttgctgatgagctcctgtgccattgcactgctgagctgcaccaaacagggacatcttttaagagcttgttgcctggaaatgatccatgtaaccaactgttcaggaagagcacactgtttgctgctcactttagctaaagcaaaactgtgtgcattatgcaatgcatatgcatccttccatctacccctgtgtcctttgccccccaaactgtgtaactacagtttaccatgcacatacatacaatgcacatctacccaattgtagcattgttgcaaggcctacttcagaattcagttagtccccaattgatccaactgcacacatatacatttacatatacatatacacaaacataccagcttggagaaaaggttgtaacaactttgctaaatgtgagatgtgtaatgtgtgttcttcctcttttcagggacccatggctgtcgtccaattcttgcaacatggacgcccatcgctccgtaggattgtcttctcctattgaggtatatatccttacattgttcaaagcttctttcgattcctagctaactgcatatccatgcagaaattcattagctcgcattcattctgaacatgatgtctgaaactctgaattttttttcgtttgtgcgtgtttcagaacttggaaccgtgcagatcgagcagctcgcaggtgtccaaccatgagctgagtagccctagtctcgagttcactctagggaggcctgactggcacggtgcagatcatgattagatggcaatcacagaggctaatgatcaaaaaaaaatttctcctgagatgtgaaatatatatgtgatatacaccaacctggtgctgatcatctttcgccaaccccagcttagccagagccagttcgtctgaagcttgtcatggcgaagaatgatcagcagcaatggcttgaaacgcacatcatatccactgcgtcgtcgtcatcgtcgtcgcaatcgatcggagaagagatatatatttcgcgtctcgatctcatcatcacaatttgggttttcttgattccttcttcttcttctttttgcaattaatatcatggatgcagctagagtttccttgtctgatctccatatttatttagttttgttcgccgtgccgggatcgatttacagtgtagttcagtggtgagctagctagctagagagtgagtgagtgagtgtcagctaggcagctggagatcgagagtgtgagtttggtgatgagttggttgtgtgtttgtcagtgtgtgtgaaagtgtgtgtgccattagcacatggaaagttggaaaggagagaaaggaagaaagaaaagggaattgagttcaggtgaagcaatctgccaatctatctagctacctatctatccatctacttagctcagttgctcagatgatgatctcagatttccatggcccttttttgtgtgcatgcatgccgcatatgcttctttctttaatccctgcaggttcttgcacttcctttagcctcattgatcatgtcagatactgcctacctgttcttttccagcaaccatggccggtgtgaaccggcctctcttgaccagaaactagcagatatctga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0395300, RefSeq:Os09g0395300