BGIOSGA007252

From RiceWiki
Revision as of 02:54, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007252| Description = Catalase| Definition = Oryza sativa Indica Group BGIOSGA007252, complete gene.| tag = P0036E06.27-2| tid = BGIOSGA00...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA007252

Description

Catalase

Definition

Oryza sativa Indica Group BGIOSGA007252, complete gene.

LocusTag

P0036E06.27-2

Ensembl Transcript ID

BGIOSGA007252-TA

Ensembl Protein ID

BGIOSGA007252-PA

Length

2265

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:855008..857272

Sequence Coding Region

857258..857272,856106..856906),complement(855417..856019,855008..855067

Genome Context

<gbrowseImage1> name=IndicaChromosome02:855008..857272 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:855008..857272 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCCTTGCAAGTTCCGGCCGTCGAGCTCGTTCGACACGAAGACGACGACGACGAACGCGGGAGCTCCGGTGTGGAACGACAACGAGGCGCTGACAGTGGGGCCCAGGGGGCCGATCCTCCTCGAGGACTACCACCTGATCGAGAAGGTGGCGCACTTCGCCCGGGAGCGCATCCCGGAGCGCGTGGTCCACGCCCGCGGCGCCTCCGCCAAGGGCTTCTTCGAGTGCACCCACGACGTCACCGACATCACCTGCGCCGACTTCCTCCGGTCCCCGGGCGCCCAGACCCCCGTCATCGTCCGCTTCTCCACCGTCATCCACGAGCGCGGCAGCCCGGAGACGATCCGCGACCCGCGCGGGTTCGCCGTCAAGTTCTACACCCGCGAGGGCAACTGGGACCTCCTCGGCAACAACTTCCCCGTCTTCTTCATCCGCGACGGCATCAAGTTCCCCGACGTCATCCACGCCTTCAAGCCCAACCCGCGCTCCCATGTCCAGGAGTACTGGAGGGTCTTCGACTTCTTGTCCCACCACCCCGAGAGCCTCCACACCTTCTTCTTCCTCTTCGACGACGTCGGCATCCCCACCGATTACCGCCACATGGACGGCTTCGGCGTCAACACCTACACCTTCGTCACCCGCGACGCCAAGGCCAGGTACGTCAAGTTCCACTGGAAGCCCACCTGCGGCGTCAGCTGCTTGATGGACGACGAGGCCACGCTCGTCGGCGGCAAGAACCACAGCCACGCCACCCAGGACCTCTACGACTCCATCGCCGCCGGCAACTTCCCCGAGTGGAAGCTGTTCGTCCAGGTGATCGACCCGGAGGAGGAGGAGAGGTTCGACTTCGACCCGCTGGATGACACCAAGACATGGCCGGAGGACGAGGTGCCGCTCCGGCCCGTGGGGCGCCTCGTTCTCAACCGCAACGTCGACAACTTCTTCAACGAGAACGAGCAGCTGGCGTTCGGGCCGGGGCTGGTGGTGCCGGGGATCTACTACTCCGACGACAAGATGCTGCAGTGCAGGGTGTTCGCGTACGCCGACACGCAGCGCTACAGGCTGGGGCCAAACTACCTGATGCTGCCGGTGAACGCGCCCAAGTGCGCCCACCACAACAACCACTACGACGGCGCCATGAACTTCATGCACCGGGACGAGGAGGTGGACTACTACCCATCGCGCCACGCGCCGCTCCGCCACGCGCCGCCGACGCCCATCACGCCGCGCCCCGTGGTGGGGAGGAGGCAGAAGGCGACGATACACAAGCAGAACGACTTCAAGCAGCCCGGGGAGAGGTACAGGTCGTGGGCGCCGGATAGACAGGAGAGGTTCATCCGCCGCTTCGCCGGCGAGCTCGCGCACCCCAAGGTCTCCCCTGAGCTCCGCGCCATCTGGGTCAACTACCTCTCCCAGTGTGATGAGTCGTTGGGGGTGAAGATTGCGAATAGGCTCAACGTGAAGCCAAGCATGTGA</cdnaseq>

Protein Sequence

<aaseq>MDPCKFRPSSSFDTKTTTTNAGAPVWNDNEALTVGPRGPILLEDYHLIEKVAHFARERIPERVVHARGASAKGFFECTHDVTDITCADFLRSPGAQTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPRSHVQEYWRVFDFLSHHPESLHTFFFLFDDVGIPTDYRHMDGFGVNTYTFVTRDAKARYVKFHWKPTCGVSCLMDDEATLVGGKNHSHATQDLYDSIAAGNFPEWKLFVQVIDPEEEERFDFDPLDDTKTWPEDEVPLRPVGRLVLNRNVDNFFNENEQLAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPKCAHHNNHYDGAMNFMHRDEEVDYYPSRHAPLRHAPPTPITPRPVVGRRQKATIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGVKIANRLNVKPSM</aaseq>

Gene Sequence

<dnaseqindica>1..15#367..1167#1254..1856#2206..2265#ATGGATCCTTGCAAGGTCAGTCACTCAGTGACTAGTGAGACTAAATCTACTTAATCTTGTAGTTAATAATTGAGGTTTCATTCAGCTAGTTGTGGAGATTCAAGAGAGAGCTTCTGGTAGCTGTAACTTCTTATAGAATATTTGGTCGATTATCAGAAACTTCCTTAAATAACCTAGATTATCGACTAGATTCTACGAAAATATATTTGTAGAATCCGAAACCCATCTTATTCTCACGAACACCAGCTATATTTTTCTTTTTTAGTCTCAAGCTCTTCAAACATGCATGGCTGGTTGATTCAGCTAGTCGATCATTAAGTATATAATTAATTAATTAATTAATAGTAATACGTGCTACCCATGCAGTTCCGGCCGTCGAGCTCGTTCGACACGAAGACGACGACGACGAACGCGGGAGCTCCGGTGTGGAACGACAACGAGGCGCTGACAGTGGGGCCCAGGGGGCCGATCCTCCTCGAGGACTACCACCTGATCGAGAAGGTGGCGCACTTCGCCCGGGAGCGCATCCCGGAGCGCGTGGTCCACGCCCGCGGCGCCTCCGCCAAGGGCTTCTTCGAGTGCACCCACGACGTCACCGACATCACCTGCGCCGACTTCCTCCGGTCCCCGGGCGCCCAGACCCCCGTCATCGTCCGCTTCTCCACCGTCATCCACGAGCGCGGCAGCCCGGAGACGATCCGCGACCCGCGCGGGTTCGCCGTCAAGTTCTACACCCGCGAGGGCAACTGGGACCTCCTCGGCAACAACTTCCCCGTCTTCTTCATCCGCGACGGCATCAAGTTCCCCGACGTCATCCACGCCTTCAAGCCCAACCCGCGCTCCCATGTCCAGGAGTACTGGAGGGTCTTCGACTTCTTGTCCCACCACCCCGAGAGCCTCCACACCTTCTTCTTCCTCTTCGACGACGTCGGCATCCCCACCGATTACCGCCACATGGACGGCTTCGGCGTCAACACCTACACCTTCGTCACCCGCGACGCCAAGGCCAGGTACGTCAAGTTCCACTGGAAGCCCACCTGCGGCGTCAGCTGCTTGATGGACGACGAGGCCACGCTCGTCGGCGGCAAGAACCACAGCCACGCCACCCAGGACCTCTACGACTCCATCGCCGCCGGCAACTTCCCCGAGTGGAAGCTGTTCGTCCAGGTAGGTGATCATCCAGAAATTAACGCCTATACGATCTGAGTTCGAAGCCGCAGTACTCCTTCTAATTAATTATTTAATACTGTTAGGTGATCGACCCGGAGGAGGAGGAGAGGTTCGACTTCGACCCGCTGGATGACACCAAGACATGGCCGGAGGACGAGGTGCCGCTCCGGCCCGTGGGGCGCCTCGTTCTCAACCGCAACGTCGACAACTTCTTCAACGAGAACGAGCAGCTGGCGTTCGGGCCGGGGCTGGTGGTGCCGGGGATCTACTACTCCGACGACAAGATGCTGCAGTGCAGGGTGTTCGCGTACGCCGACACGCAGCGCTACAGGCTGGGGCCAAACTACCTGATGCTGCCGGTGAACGCGCCCAAGTGCGCCCACCACAACAACCACTACGACGGCGCCATGAACTTCATGCACCGGGACGAGGAGGTGGACTACTACCCATCGCGCCACGCGCCGCTCCGCCACGCGCCGCCGACGCCCATCACGCCGCGCCCCGTGGTGGGGAGGAGGCAGAAGGCGACGATACACAAGCAGAACGACTTCAAGCAGCCCGGGGAGAGGTACAGGTCGTGGGCGCCGGATAGACAGGAGAGGTTCATCCGCCGCTTCGCCGGCGAGCTCGCGCACCCCAAGGTCTCCCCTGAGCTCCGCGCCATCTGGGTCAACTACCTCTCCCAGGTAATTCATACCAGCAATTTAGTATTACCTCCATTTTTGTTTTTATGACACTACTAGTTAAAGTTTGAACTAATCAACGTCATATAAAAAAAACGGAGGGAGTAGTTATTAGTAATGATTAATTGTTTTCTCTTAGTTAATCCACATGATTAACACCATGTTTAGCACAACAGTTTTATGAATCCATAGATAAATTATTTAATCCTATTTTATATGAAATATATAATTTTAAACCACTGTAGAGAATTTGAAATTAATATGACTTAATCGCTATTAATTTGCACTAATTCCGGCAAAAAAAGCTATTAATTTGCACTAACTATGTAATTAACTCATTTACTTCATGCAGTGTGATGAGTCGTTGGGGGTGAAGATTGCGAATAGGCTCAACGTGAAGCCAAGCATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007252