Os12g0565100

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Revision as of 10:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0565100| Description = Disease resistance protein family protein| Version = NM_001073577.1 GI:115489115 GeneID:4352542| Length = 5936 bp| ...")
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Gene Name

Os12g0565100

Description

Disease resistance protein family protein

Version

NM_001073577.1 GI:115489115 GeneID:4352542

Length

5936 bp

Definition

Oryza sativa Japonica Group Os12g0565100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23386270..23392205

Sequence Coding Region

23386271..23386666,23388408..23389219,23390065..23391355

Expression

GEO Profiles:Os12g0565100

Genome Context

<gbrowseImage1> name=NC_008405:23386270..23392205 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23386270..23392205 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cgagggagtttaacgcaaaacttgttttgcagagtatccagagtagactcgagaaaagtcgtcgttcgccattcccatccgccgccaaggctccaaacctcccttcccctccgcagctccgccttacgacgccatggccgtcgcctcgctgtcgccgccgccggattgagggcgccgccatcagccggccgcgtcgctgctcttcgcgtgctcctcgcaacggggggcggcggggtccgtccaactgccgctcctaccacctcttcatcagcagcagcaacgcccgctttctccgccaccggcagccgaggcgccgcctcctccgcccacatcgcagcgttgacttctccaggttggctcgccaactccatcggctgtagacttccagccttccagatggcaagtgccttgacgggagtgatgacatccgtcatcaacaagctcactgctcttcttgggaaggagtacatgaagttgaaaggagtacagggggaggtggagtttatgatagatgagctgagcagcatgaatgctctccttcataggctggcggaggaggaccaacaccttgatgtgcaaacgaaggagtggcgtaaccaagtgcgcgaaatgtattatgacattgaggactgtatcgatgacttcatgcatcaccttggccatactgacattgctgagtctgcagggcttgtccataggatggcccaacaccttaagactctgagggtgcgccaccaaattgccaaccaaatcgagaagctcaaagcacgcgttgaagatgcaagcaagcggcgattgaggtataagcttgatgagcgcaccttcaatcttagtactgcaggggccattgacccccggttaccttctctatatgctgagtcagacgggcttgttggaattgaacaaccaagggatgtggttatcaagttgctaacggagggagagggtgcatcatcgcagaagctaaaggtgatatccattgtgggtcctggaggtctaggtaaaactacacttgcgaatgaggtgtttcgcaaactagagagccagttccagtgtcgagcttttgtttctctgtcacagcagcctgatgtgaagaagattgtaagaaacatatactgtcaagtcagccagcaggagtatggtaacatagatatatgggatgaggaaaagctgataaacgcaacccgagaattcctaacgaacaagaggtactttgtcgtcattgatgatatatggagtactcaagcatggaagaccataagatgtgctttatttgtgaataattgtggaagcagaataatgacgacaacacgcaatatggcaatagccaagtcatgttgcactcctgaccatgatcgtgtctttgaaataatgcctcttagtatagataactcgaagagtttgtttttgaaacgaatatttggctcaaaggatgtgtgcattcctcaattggatgaggtttgttatgaaatattgaaaaaatgtggcgggtcgccattggctattattacaatagctagcttattggctaataaagctaataccaaggaagaatgggaaagggtgcgtaattctatcggttcaacactgcaaaaagatcctgatgtagaagagatgagaaggatattatccttgagctatgatgatcttccccaacatttgaagacatgcttactgtatctaagcatatttccagaagattatgagattgagagggatcgactagtagagaggtgggttgctgaaggattcattattacagagggggggcatgacttgaaggaaataggagactgttattttagtgatcttatcaatagaagcatgattgaaccggtgaaaatccaatacaatggtcgagttttttcctgccgagtccatgatatgattcttgatctccttacatgcaagtcaactgaagaaaattttgccaccttcatgggtggccaaaatcagaaattagtgctacagggtaaggttcgtcggctctctctcaactattacactcaagatcacatcatggttccatcaacagcaatcatcacacattgccgatctctcagtatttttgggtatgctgaacagaagcctcctctttcaatgtttccagttcttcgtgtacttgatatagaaaatggtgaagatatggaaagcagctataccaaacacataaggaagctgattcagttgaagtacctgcgactgaatgtaagaagcgtagctgaacttcctgaaaaacttggagagctacaacatttgcagactcttgatctcagacggacaaacataagaaaattgccagagagcttcgttcgtctgcaaaatttgacatatttgcgtgtcaataatctggatttgcctgaaggaattggacatctgcatgctctgcaggagctaacagagatcagaatcagccaggactgcttggcatcttccttgttggagctaagaaatctgacgaagcacacattgactacaaagttttcgccgataatttag</cdnaseq>

Protein Sequence

<aaseq>RGSLTQNLFCRVSRVDSRKVVVRHSHPPPRLQTSLPLRSSALRR HGRRLAVAAAGLRAPPSAGRVAALRVLLATGGGGVRPTAAPTTSSSAAATPAFSATGS RGAASSAHIAALTSPGWLANSIGCRLPAFQMASALTGVMTSVINKLTALLGKEYMKLK GVQGEVEFMIDELSSMNALLHRLAEEDQHLDVQTKEWRNQVREMYYDIEDCIDDFMHH LGHTDIAESAGLVHRMAQHLKTLRVRHQIANQIEKLKARVEDASKRRLRYKLDERTFN LSTAGAIDPRLPSLYAESDGLVGIEQPRDVVIKLLTEGEGASSQKLKVISIVGPGGLG KTTLANEVFRKLESQFQCRAFVSLSQQPDVKKIVRNIYCQVSQQEYGNIDIWDEEKLI NATREFLTNKRYFVVIDDIWSTQAWKTIRCALFVNNCGSRIMTTTRNMAIAKSCCTPD HDRVFEIMPLSIDNSKSLFLKRIFGSKDVCIPQLDEVCYEILKKCGGSPLAIITIASL LANKANTKEEWERVRNSIGSTLQKDPDVEEMRRILSLSYDDLPQHLKTCLLYLSIFPE DYEIERDRLVERWVAEGFIITEGGHDLKEIGDCYFSDLINRSMIEPVKIQYNGRVFSC RVHDMILDLLTCKSTEENFATFMGGQNQKLVLQGKVRRLSLNYYTQDHIMVPSTAIIT HCRSLSIFGYAEQKPPLSMFPVLRVLDIENGEDMESSYTKHIRKLIQLKYLRLNVRSV AELPEKLGELQHLQTLDLRRTNIRKLPESFVRLQNLTYLRVNNLDLPEGIGHLHALQE LTEIRISQDCLASSLLELRNLTKHTLTTKFSPII</aaseq>

Gene Sequence

<dnaseqindica>2..397#2139..2950#3796..5086#gcgagggagtttaacgcaaaacttgttttgcagagtatccagagtagactcgagaaaagtcgtcgttcgccattcccatccgccgccaaggctccaaacctcccttcccctccgcagctccgccttacgacgccatggccgtcgcctcgctgtcgccgccgccggattgagggcgccgccatcagccggccgcgtcgctgctcttcgcgtgctcctcgcaacggggggcggcggggtccgtccaactgccgctcctaccacctcttcatcagcagcagcaacgcccgctttctccgccaccggcagccgaggcgccgcctcctccgcccacatcgcagcgttgacttctccaggttggctcgccaactccatcggctgtagacttccagccttccaggtcatccaccatctcaccccctctcaatggcaaagctactatcccctgctcatgatgcactctgcctgttcgttgtaatgtttattagtggaaaatagctcagcaacgccatctgtcaacgattaataatccatgttgtttgccctgtgaccactgaaagtttaatagtgcttattaatattttggcatgcgaatgctcctaacagaccaaaatgtagtctctgtcagtttcttgggtttctttgtaaccatctgaatttaaaccagtaaattacctatctgttgtatgtaaggaatggatttcagaagtttaaaatagcaaatggggctatctcatgataaccttaagtggtgagatgaggttgggggtacaattcagatcaagagttttactgatctgtaccaattatcatgtacaattttaaaatgacataattaaaaattttatagaaatgaactgcgaaaacatatatggtgattagatacttggatgaatgagagatagtagtataatgttgactaatttcttaagtaccattaccatcttgtgggagatcatggtccttgaggccattttaattgttgggatgaccgaaggaggtcatccaatgtcattaagatagaggaaaaaaaagttacaagaaagtttttcatcgacagcaagctatcgaggaaggatgtgcacaaagcgcacgccccgacaccacatgccaaccgcacaaacacaagctacagagaggggagccaaacatcgaaccggcaaccgctatgcgaggccggtcgccgctatgcttacaacaacaccacagaacggaaactcaaaaaagacaacgccttcatgaaggtagcgacatcaaaagatgccgccgttgtccgtccaaaagactggacaaggttttcacctagagatcctcgtcgagggaggagtgtacctcgacaacgccccccagagggttaccgcgccagaaggcgtagccgctgccggtccagcgaaacactgggctaggctttcgcctgggactctctacccccgtcgccgtggtccgttgcccgccaactctgataccaccagcttaacatcggtagcacgtgacctccaccacaccggaccggcgcttgaggccattttaataccattagatgattcatcatctcatgttcctcactcaacacacatgatagagtatatgctaatttcatatccatctagcctccctccgaagctgcagatcacatgacagagtgaccacaatatatatacagtagtaacatataaggtgaattgtggaaagtgaactccacagggaaacaaagctgcatatgccaatctccctaaataggcaccagtccaccagattctgctaattgtgctttctgttttatcacctttcttgggaaaaagcatgtccctcttctggtcattactaagaggataacttaacagcagacatatctcctgagtgcagctgtccttaaaccaaatcttagttcatcttctttcctgaaggctaaattctgcaatcatttccaatggtctagtggtagatacaaaggttatttatgaatgcttttgttattttatactcttgatggtaaaatgtgtaattgtggatgtccattattatctagctcttattgtggtaatgcatacgattcctgtaccatgctttcttttaatcatgctgatgtttagttctatgaaattggaaacgttgctgaggcagtcaaaactttccaacagatggcaagtgccttgacgggagtgatgacatccgtcatcaacaagctcactgctcttcttgggaaggagtacatgaagttgaaaggagtacagggggaggtggagtttatgatagatgagctgagcagcatgaatgctctccttcataggctggcggaggaggaccaacaccttgatgtgcaaacgaaggagtggcgtaaccaagtgcgcgaaatgtattatgacattgaggactgtatcgatgacttcatgcatcaccttggccatactgacattgctgagtctgcagggcttgtccataggatggcccaacaccttaagactctgagggtgcgccaccaaattgccaaccaaatcgagaagctcaaagcacgcgttgaagatgcaagcaagcggcgattgaggtataagcttgatgagcgcaccttcaatcttagtactgcaggggccattgacccccggttaccttctctatatgctgagtcagacgggcttgttggaattgaacaaccaagggatgtggttatcaagttgctaacggagggagagggtgcatcatcgcagaagctaaaggtgatatccattgtgggtcctggaggtctaggtaaaactacacttgcgaatgaggtgtttcgcaaactagagagccagttccagtgtcgagcttttgtttctctgtcacagcagcctgatgtgaagaagattgtaagaaacatatactgtcaagtcagccagcaggagtatggtaacatagatatatgggatgaggaaaagctgataaacgcaacccgagaattcctaacgaacaagaggtatgctcattacttagtttcaaagatatcttcgctgtaggtcatgcatcaccttttgaccaacattcacaatatctgctaaaatacaaatatgcatgtttttagataacacagatatttatgttgattatttatccaattgattgctttaagttaaatgtataaggatgccgtttgtgcttctagaaaatgcacattatcggtatgttttcatgggtagtttctgtagtttttattctcactattgtacagaatgcagctctcctgcattcttttcaagaaaacaaaatgcgcaaattctaaacataagtactacccccgtcctaaaatatcgcaactttttggctatgaatctggacaagtaactaaaagttgctatatttttggggcagaggtagtatctattagtagttccatattccaataatattccattagaaagattggatcgactgtgacagggtgactcactacaaaagtttcatattgtcagttgttttagtggccaagccataggtaataatgactatttgtgtcagctgttatatagtgcaagaagtgcttttgtatctcatggaaaacggttgcaatgatcagttgctttcatctcaatttatatggccactgtttgtgggccataaaatcaatttcctttttcttgttactgtatgtatctttttttttttgcaagaataaagtacatatctattacttcctagtttgaactagaaaggtagctatattttggggcggagggagtatttgtggaccttatgccattttgatttttctaactcgtcctactttataagaggtctaaaagtatgaacttgcattgcacataggtactttgtcgtcattgatgatatatggagtactcaagcatggaagaccataagatgtgctttatttgtgaataattgtggaagcagaataatgacgacaacacgcaatatggcaatagccaagtcatgttgcactcctgaccatgatcgtgtctttgaaataatgcctcttagtatagataactcgaagagtttgtttttgaaacgaatatttggctcaaaggatgtgtgcattcctcaattggatgaggtttgttatgaaatattgaaaaaatgtggcgggtcgccattggctattattacaatagctagcttattggctaataaagctaataccaaggaagaatgggaaagggtgcgtaattctatcggttcaacactgcaaaaagatcctgatgtagaagagatgagaaggatattatccttgagctatgatgatcttccccaacatttgaagacatgcttactgtatctaagcatatttccagaagattatgagattgagagggatcgactagtagagaggtgggttgctgaaggattcattattacagagggggggcatgacttgaaggaaataggagactgttattttagtgatcttatcaatagaagcatgattgaaccggtgaaaatccaatacaatggtcgagttttttcctgccgagtccatgatatgattcttgatctccttacatgcaagtcaactgaagaaaattttgccaccttcatgggtggccaaaatcagaaattagtgctacagggtaaggttcgtcggctctctctcaactattacactcaagatcacatcatggttccatcaacagcaatcatcacacattgccgatctctcagtatttttgggtatgctgaacagaagcctcctctttcaatgtttccagttcttcgtgtacttgatatagaaaatggtgaagatatggaaagcagctataccaaacacataaggaagctgattcagttgaagtacctgcgactgaatgtaagaagcgtagctgaacttcctgaaaaacttggagagctacaacatttgcagactcttgatctcagacggacaaacataagaaaattgccagagagcttcgttcgtctgcaaaatttgacatatttgcgtgtcaataatctggatttgcctgaaggaattggacatctgcatgctctgcaggagctaacagagatcagaatcagccaggactgcttggcatcttccttgttggagctaagaaatctgacgaagcacacattgactacaaagttttcgccgataatttagtgtcatcgcttcgcaaactgggcagactcaaccttcgaataatgtgcatcctgggttattatgcgtgttccatagagttcttgttggattcatggttcccctcccctcatctcctccaatcatttgcgatgggcatgaactatcatttccccagagtcccatcctggatcgcatcacttgacaacctcacttgcttagaaatcaacatagacctggtggatgagaaagtgatacagattcttggggatttacctgttctgatatttctgtggctgatatcaaaagaagcaggtcccaatgaaaggctcgtcataagaagtaacatgtttgtatgcctgaaggagttccacttcacctgctggagaaattgggaagggctgatgtttgaagctggggcaatggcaaaggttgagatgctgcgggtttcgttcgacgccggtggcagtgttcttgatttcggcatccagcacctggcttccctcaggcatctcatcgtcgagatcgtctgtggcggtgcgacgcttcgggaggtggaggcactggaagatgccattaggcactcagctgatctccttccatgccacccagcagttgaagttcgaacttgggatgaagaaaagatggtgaaggaggaggtgcaaatcatggctgaagagaagatccaaacaaacagctaaaaaaccagcatgactttgctaccagtgaaggcagctgagcagtattttaaggccccgtttggtacggctccaaactccaactcccagctccaaactcctactccagttgaagctagctcctattggagttacagaccgatcaaaagtgtttggcaaacttttagctccagatc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0565100, RefSeq:Os12g0565100