Os12g0565300

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Revision as of 10:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0565300| Description = Similar to Calmodulin-binding protein MPCBP| Version = NM_001073579.1 GI:115489119 GeneID:4352544| Length = 4295 bp|...")
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Gene Name

Os12g0565300

Description

Similar to Calmodulin-binding protein MPCBP

Version

NM_001073579.1 GI:115489119 GeneID:4352544

Length

4295 bp

Definition

Oryza sativa Japonica Group Os12g0565300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23400198..23404492

Sequence Coding Region

23400505..23400821,23400986..23401133,23401416..23402626,23402703..23402958,23404137..23404385

Expression

GEO Profiles:Os12g0565300

Genome Context

<gbrowseImage1> name=NC_008405:23400198..23404492 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23400198..23404492 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgcggcgatggcggagtcggataataacggcagcgaggtcagccccggcggcggcgggagggactcggcgtcggcggcggcggcggtagcttcgccggtgaaggcgaaggcgagggcgttgctggagctggagacggccagcgcggcggcggcggcgtcggagtcgtcggaggcgagggtcgacgacggcaacatccaggaggccgagtcgtcgctccgcgagggcctctccctcaactacgaggaagcgagggctctcctagggagactggaataccagagaggcaatgtagaagctgcactgcgagtatttgatgggatagatcttcaagctgctatccagcgctttcaaccatcgctttcagaaaagccaccctcaaaacgaagtaacaaattacgttcagattcatcgaattcaggatcgcagcatgctgccagtcttgttcttgaagccatttacttgaagtcaatgtctcttcagaagttagggaaagcagtggaggctgctcaacagtgtagaagtgtccttgatgctgttgaaagtattttccaacgtggcatacccgatgtcatggttgaacaaaagcttcaggaaaccgttagtaaatctgtcgagcttctcccagaactttggaagcaagctggagcctatcaagaggcgctcgcttcttaccggcgtgctcttcttagtcagtggaatctcgatgatgactgctgcacaaggattcagaagagatttgctgtttttctgttgtatggtggcgtagaggctagccccccaagcttggcttcacaaactgaaggatcatatgttcctaagaataacttggaagaggcaatccttttgctcatgataatattgaaaaagtggtaccttgggaagactcactgggatccatcagtgatggagcatctaacatttgcattgtcactttgtggtcagacatctgttcttgccaagcatcttgaagaggttttacctggaatataccctcgaactggaagatggtatagtctagctctttgcaattatgcagcttcacataatgaagctgcattaaatttgttaaggaagttgttgaataagaacgagagtcctggtgacataatggccctcctgttagctgctaagttatgcagctcagattattctcttgcttctgaaggagtagagtatgcaagaagagctgttacaaatgttgattcatcagatggtcatttaaagagcgctgcgctccacttcttggggagttgcctggctaagaagtctagaatcgctacatctgatcaccaaagatctctcttgcagactgagtctttgaagtcacttagtgaagcgatttctcttgatcgtcacaacccagatttaatatatgacatgggtattgaatatgctgagcaacgaaacatgcaggctgctttgaaatgtgcaaaggagttcattgatgcaactggtgggtctgtttctaaaggttggagattgctatctttggttctttctgcacaacaaaggtattcagaagcagaggtggtgactgatgctgcattagatgaaactacaaagtgggaacaagggccattacttagaataaaggctaaactgaaggttgctcaatcgttgccaatggaagcagttgaagcataccgtgcccttcttgctcttgttcaggcacaacgaaaggcttatggtaccgtaaaaaatggcacagaggaggttgataataaagtgagcgagtttgaagtttggcaaggtcttgccaacttgtatgctagtctttcctattggagagacgccgagatatgtttacagaaggctaaagccctcaaatcattctcggccataacgcttcatgcagaaggttacacgcgtgaggtgcgtgagcagacacaggacgcactggctgcatacttcaatgcggtctcgaccgaggtggagcacgtaccatcaaaggtatccatcggcgccctcctgtccaaacaaggccccaagtatctccccgtcgcaaggagcttcctctcggacgccctaaggcacgagccgacgaaccggatggcatggttctacctagggaaggtccacaagcatgatggcaggctagctgatgctgctgactgcttccaggcagcctcaatgcttgaggaatcagacccaatagaaagcttcagatcactctga</cdnaseq>

Protein Sequence

<aaseq>MAAAMAESDNNGSEVSPGGGGRDSASAAAAVASPVKAKARALLE LETASAAAAASESSEARVDDGNIQEAESSLREGLSLNYEEARALLGRLEYQRGNVEAA LRVFDGIDLQAAIQRFQPSLSEKPPSKRSNKLRSDSSNSGSQHAASLVLEAIYLKSMS LQKLGKAVEAAQQCRSVLDAVESIFQRGIPDVMVEQKLQETVSKSVELLPELWKQAGA YQEALASYRRALLSQWNLDDDCCTRIQKRFAVFLLYGGVEASPPSLASQTEGSYVPKN NLEEAILLLMIILKKWYLGKTHWDPSVMEHLTFALSLCGQTSVLAKHLEEVLPGIYPR TGRWYSLALCNYAASHNEAALNLLRKLLNKNESPGDIMALLLAAKLCSSDYSLASEGV EYARRAVTNVDSSDGHLKSAALHFLGSCLAKKSRIATSDHQRSLLQTESLKSLSEAIS LDRHNPDLIYDMGIEYAEQRNMQAALKCAKEFIDATGGSVSKGWRLLSLVLSAQQRYS EAEVVTDAALDETTKWEQGPLLRIKAKLKVAQSLPMEAVEAYRALLALVQAQRKAYGT VKNGTEEVDNKVSEFEVWQGLANLYASLSYWRDAEICLQKAKALKSFSAITLHAEGYT REVREQTQDALAAYFNAVSTEVEHVPSKVSIGALLSKQGPKYLPVARSFLSDALRHEP TNRMAWFYLGKVHKHDGRLADAADCFQAASMLEESDPIESFRSL</aaseq>

Gene Sequence

<dnaseqindica>3672..3988#3360..3507#1867..3077#1535..1790#108..356#acctcctcctcctccatctccctctcctagccaagaactcctcctcccctcccccagcattgccgtgggatgtggcggcggcggcggcggagttgaggcgatcaacaatggctgcggcgatggcggagtcggataataacggcagcgaggtcagccccggcggcggcgggagggactcggcgtcggcggcggcggcggtagcttcgccggtgaaggcgaaggcgagggcgttgctggagctggagacggccagcgcggcggcggcggcgtcggagtcgtcggaggcgagggtcgacgacggcaacatccaggaggccgagtcgtcgctccgcgagggcctctccctcaactacgaggtccgctctcgaaatcgaattcgaattcgaaatttcgaatcgaatcgaaatccctccctgtcgcgctcgtctcgctcgctctttggattcttggttcgttcgatctccgagaggtggaatcgcgttcctcctgggtggggggcgaggtggtggaatggcaggattcgaatctttcggtcaatggcgtagctatctgatgttgttggttgttgcgtttggggggagatcgggatgcaacgaatgatattcgcgcgatgttcctggataaatttctcgcgtttcgcgatcgtttcgggattgagggttgattagatgagactatgtggaagggtgtggtatatccattttgatttgacaatatggagttggtttggttgaatttaggagcattttgatctaataatgaggaaattatgtccggagaaaaagatgattttgttttgggggaaatttagggtgtaatctttgtggagatggtggttctgtgtgccctagcttttgaatgttgggtggagacttagctatgttaatcttcttagaagaaatattgatattgatttcttgagagcgtgcaatgaagggatagctgtggaaaagaaagaaagctttcttttgtggagaacatcgtttgcggatggcgcaaccgtatgatcatggttctgttaatgggttgttgtgatacaggaggaatttcagagctggaatccattctgacactaacaaataacatcaaggggttcgatttaaattcagaagagatttacagtgtagacattttgtggattgaatgcaaaaatgatcatcttccagtgtttagttcatctaagtagtcacctgttctttgtataatctttgttgggagcaaaaagatgccatttcattttctatattaagacctacaagcttgtgcttatttcagaatgtattgttaacacaacttcctttttagtgaaatttctggaagagattcaatcagacatggttcttctgtatcttagataaaaataggatcttgacatatatcttggttggcattggcaatgatggttgtccactatgattagaagcaaaaaaagaataaccgaaactttttttcagtggctctcgtaagttttatttttattattattatctttgcttactctgggtttttttattttttatgctttcaattctaggaagcgagggctctcctagggagactggaataccagagaggcaatgtagaagctgcactgcgagtatttgatgggatagatcttcaagctgctatccagcgctttcaaccatcgctttcagaaaagccaccctcaaaacgaagtaacaaattacgttcagattcatcgaattcaggatcgcagcatgctgccagtcttgttcttgaagccatttacttgaagtcaatgtctcttcagaagttagggaaagcagtgggtatgaagtgctaaatttcactacataatcatttctctccatgcatatcataacttttgaaaccatttacttgcagaggctgctcaacagtgtagaagtgtccttgatgctgttgaaagtattttccaacgtggcatacccgatgtcatggttgaacaaaagcttcaggaaaccgttagtaaatctgtcgagcttctcccagaactttggaagcaagctggagcctatcaagaggcgctcgcttcttaccggcgtgctcttcttagtcagtggaatctcgatgatgactgctgcacaaggattcagaagagatttgctgtttttctgttgtatggtggcgtagaggctagccccccaagcttggcttcacaaactgaaggatcatatgttcctaagaataacttggaagaggcaatccttttgctcatgataatattgaaaaagtggtaccttgggaagactcactgggatccatcagtgatggagcatctaacatttgcattgtcactttgtggtcagacatctgttcttgccaagcatcttgaagaggttttacctggaatataccctcgaactggaagatggtatagtctagctctttgcaattatgcagcttcacataatgaagctgcattaaatttgttaaggaagttgttgaataagaacgagagtcctggtgacataatggccctcctgttagctgctaagttatgcagctcagattattctcttgcttctgaaggagtagagtatgcaagaagagctgttacaaatgttgattcatcagatggtcatttaaagagcgctgcgctccacttcttggggagttgcctggctaagaagtctagaatcgctacatctgatcaccaaagatctctcttgcagactgagtctttgaagtcacttagtgaagcgatttctcttgatcgtcacaacccagatttaatatatgacatgggtattgaatatgctgagcaacgaaacatgcaggctgctttgaaatgtgcaaaggagttcattgatgcaactggtgggtctgtttctaaaggttggagattgctatctttggttctttctgcacaacaaaggtattcagaagcagaggtggtgactgatgctgcattagatgaaactacaaagtgggaacaagggccattacttagaataaaggctaaactgaaggttgctcaatcgttgccaatggaagcagttgaagcataccgtgcccttcttgctcttgttcaggcacaacgaaaggcttatggtaccgtaaaaaatggcacagaggtttgtctcctgttagcatttagttcctcacaagtactgtgtactttagagtgaactagtacgatttctttgaaccatgtggatactgagattctccagatatgaaacccttatcttttgcagttagttggctagcataagagtctgatattctccagatgaaaaactctttctgcgaacataacaacttcaacctacaaactgcctcttgtgatttgacagtacttttcatcaatatgtcttgtctgctttgccgtctcattctgtgtgaaattctttcaggaggttgataataaagtgagcgagtttgaagtttggcaaggtcttgccaacttgtatgctagtctttcctattggagagacgccgagatatgtttacagaaggctaaagccctcaaatcattctcggccataacgcttcatgcagaaggtgaggaactgtctcaatatgctgaaatgctctgtctacttccttttggaattttcatgcaatgtaggctaagcatttacaaactgagaagttggaaaaccatctcctcaccttatttccctcgtatatcctgttgtcattgtgactcccttatttccatccaggttacacgcgtgaggtgcgtgagcagacacaggacgcactggctgcatacttcaatgcggtctcgaccgaggtggagcacgtaccatcaaaggtatccatcggcgccctcctgtccaaacaaggccccaagtatctccccgtcgcaaggagcttcctctcggacgccctaaggcacgagccgacgaaccggatggcatggttctacctagggaaggtccacaagcatgatggcaggctagctgatgctgctgactgcttccaggcagcctcaatgcttgaggaatcagacccaatagaaagcttcagatcactctgatggctcatcatcttactgcagcaacattgaggttttcttttttcgcgggttaatttttcttctctcctcttcttctcctcctacctttttttggtacatagctgggtggaatctggataccagctacatgtaacttttgtatccgtaggtgccagcgtgctcgtcacgctgttgtcggatattttgacaaaatgatgtaatttggctgctaaatggtaatagccgtatatataagttgcactagaactgtcgtactgtactgttgatttttacagatattagtattgaatataatccattgctatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0565300, RefSeq:Os12g0565300