BGIOSGA007323

From RiceWiki
Revision as of 02:55, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007323| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007323, complete gene.| tag = B1370C0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA007323

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007323, complete gene.

LocusTag

B1370C05.12

Ensembl Transcript ID

BGIOSGA007323-TA

Ensembl Protein ID

BGIOSGA007323-PA

Length

4952

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:59709..64660

Sequence Coding Region

59709..59861,59970..60063,60135..60202,60483..60581,60876..60932
,61281..61349,63499..63567,63710..64660

Genome Context

<gbrowseImage1> name=IndicaChromosome02:59709..64660 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:59709..64660 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGATGGCTCTCCGCCGCGCCGTCGGAATTGGCTCCGCCGCCGCCCTCCGCTCTGCCGCCTACCTCCGCCGCGCCTCCCCCTCGCCGGCGCGGCCCCATCCCCTCGTCCCTCCACCGCCTGCCGCCCGAACCTTCGCCGCCCCGCCCCAGGTGATGAAGAGGAGCACCAAGGACGACGACGACGATGGCCCTCGGATCAACAACGACATCACCTCTCCCTTTGTTCGACTCGTCACTGACCAAGGCCATAGTGTTGTCCCCAGGCACGAAGCTCTTCAGCTTGCGGCCAGGATGGACTTGGACTTGGTCGAGGTCCACAGAAAATCAGACCCTCCTGTCTGTAAAATCATGGATTTTCACAAAGAGAAGTATAAGAAAGACGTTAAGGAGAAAGAACGCCTAAAAACTAAGTCTGCTATTGTCTTACGCGGTGGGGAGAACAAAGAAGTGCGGTTTAAGGGTAAAACAGAACTAAAAGACTTGAAGGTGAAAGCAGATGGAATCACCAGATTAATGGAGCGAGGTTACAGGGTGAAGTGCATGGCGATGCCCTCAGGTAATGAAGAAGAAGATTTAGGAGGGCCACTATCTCGGTTGTTAGGACTTATACAAGATGTCTGCATAGTGGAAAGTGGCCCACATTTGGACTCGAAGCATGCATACGTTATTGTTAGGCATGTGAAGTTTGCAACAAAGAAAGCTGGAAAGAAAGCTAGCAAGGCCATAGAAGATGTAGGCAAAGGTGCCCGCAAGAATGCCTCTGAATTGTCAACTGTTACTGCCGATAGTGGAGATGAGACAAATGATTGTGGAAATGGGGCCATCTCAGATCAAATGGACAACGCTCCTGCTTACGTCTCCAATGAATTTTCCATGCAGAAAGATGCACATGATAGAGGCTCTAGAAGGGAGTTGAGTTGGTCGAAATCGAACCCGGGCAACTACGGTGAAAACATGCAAAATGTTGATGCTGGGGCACACAGAATTAGCTCTAGTCAGCGGGCAGCACAAACCTCAGAGGGTGGGTTTGGTTCCAATAATGTAAAATCTGGTATGGAAAAGCAAGAAAAGGCTAATGAAGATGTGGTACCTGCAGAAACCAACAGATACGCCAGCCGAAGACAGCAGATAAGAGGAGATAACCAGGGTTTGAGCCAAGATAGATCCCCGCAAGGTCATAGAAGGAATGAAAATGAAGTTCGCTATCCGGTCAATGACTACCAAAGACCTCTGCAGCAGAACAACCGACAATCACCAAGGTTCAACGATGGTAGATTACCACAAGAACCAAGAAGAAATGAAAGGGGAGGCCATATTCCGTTGAATAACAAACAAGGCCAATTTCAGCAAATGAATCATCCTGCTGAATCAGCGGGTAATGGTGCAGGCTATCCTACTCCGACGGCCAAGAGTTTTGGAGTTTTCAGTACCAGAAAACCTGCTACGTCTGAGTTGGGGAAAACAAATGGTGCTAGTAGGACTGCTAATTCTGATGTACCTAAAAGCTATGGAATCTTTAGTTCTCCTAGAAGGGAATCTGGTGATAAAAGCTCATGA</cdnaseq>

Protein Sequence

<aaseq>MMMALRRAVGIGSAAALRSAAYLRRASPSPARPHPLVPPPPAARTFAAPPQVMKRSTKDDDDDGPRINNDITSPFVRLVTDQGHSVVPRHEALQLAARMDLDLVEVHRKSDPPVCKIMDFHKEKYKKDVKEKERLKTKSAIVLRGGENKEVRFKGKTELKDLKVKADGITRLMERGYRVKCMAMPSGNEEEDLGGPLSRLLGLIQDVCIVESGPHLDSKHAYVIVRHVKFATKKAGKKASKAIEDVGKGARKNASELSTVTADSGDETNDCGNGAISDQMDNAPAYVSNEFSMQKDAHDRGSRRELSWSKSNPGNYGENMQNVDAGAHRISSSQRAAQTSEGGFGSNNVKSGMEKQEKANEDVVPAETNRYASRRQQIRGDNQGLSQDRSPQGHRRNENEVRYPVNDYQRPLQQNNRQSPRFNDGRLPQEPRRNERGGHIPLNNKQGQFQQMNHPAESAGNGAGYPTPTAKSFGVFSTRKPATSELGKTNGASRTANSDVPKSYGIFSSPRRESGDKSS</aaseq>

Gene Sequence

<dnaseqindica>1..153#262..355#427..494#775..873#1168..1224#1573..1641#3791..3859#4002..4952#ATGATGATGGCTCTCCGCCGCGCCGTCGGAATTGGCTCCGCCGCCGCCCTCCGCTCTGCCGCCTACCTCCGCCGCGCCTCCCCCTCGCCGGCGCGGCCCCATCCCCTCGTCCCTCCACCGCCTGCCGCCCGAACCTTCGCCGCCCCGCCCCAGGTATCGTATCAATGGATCCCCTTCACCCTCGAATCTTAACTAGTCTAGTCTAGTGTAGTGTACTACTATACTCCCTAACTACTAAGTATCTTGTTGTTGTATTACAAGGTGATGAAGAGGAGCACCAAGGACGACGACGACGATGGCCCTCGGATCAACAACGACATCACCTCTCCCTTTGTTCGACTCGTCACTGACCAAGGTACGGTACCCCCTCTCCCGTCTACCCTTGTCCTCACCGCATGCTCTCTCACTTTTTGCTCATTTTTGCAGGCCATAGTGTTGTCCCCAGGCACGAAGCTCTTCAGCTTGCGGCCAGGATGGACTTGGACTTGGTCGAGGTACTTACTGCCCTCTATCTGCTTTCTTCTTGTAACCAAACCAACCTAAACATACTAGTATTTCAATTGCCATCACCATGTCAAATCCATTTCTTTGTTTATCTATCTGTGACTCTTTCATCATTCCTTTTTACACGATTTAAGATGTTCATGGATGATACTGACAGTGGATATAAACAACCAAACCGATTCACTTGTATTTCCCTCTACAACATATCTGACCATTTGCCACATTTCTTGAGATTTGCCCAATGTTCATTACCGTTTCTCTTTTATTCAGGTCCACAGAAAATCAGACCCTCCTGTCTGTAAAATCATGGATTTTCACAAAGAGAAGTATAAGAAAGACGTTAAGGAGAAAGAACGCCTAAAAACTAAGGTATACTTACTTCCTGGCTCAGTTTTCTTAACTATCCATTGATCACTCATTCGACCAAGGCGATCAACGTACAAGGTTTGCCTTCTTGTGAGAAGGTGATGGTGGTTTAAAAGACCTGTGTTATGTTATGTAGCTGTATGGATCAAATGCCCAACATACTGCTCAATATTGATGCTCCTGGTTAATTTAATCATCCTACCATTGGGAAAGACTGTTAACCATATCGTCCCTGCTTGTGTTTGGATCTGACAGGCTATAACATATATCTCCTTGTGTTGTTCTGGTTTTGTGCAGTCTGCTATTGTCTTACGCGGTGGGGAGAACAAAGAAGTGCGGTTTAAGGGTAAAACAGTAAGTGGTTTTTTCTTGCTTTAGTTTGTTTATTGCAGCCTATCATCTTGGCTGCAATAGATTGCTGATCTGGTAACTGGTATGATATGGTCGTATGGAGTATCTAGTTGGCCTATCATACTTGGTTTTGTCCAAGGCATTTTTTTTTCAGTTTGTTTGGATCCATATGAACGGTGCCTAGTTTGTTTGGACTTCTCTAGTCTTTCTGTTTAAATTATTGAACCTTTCTATGGAAGTATCAAAGAGTCCAAATTATTTCAAAGTTTCTTTTGCAGTTACGTTTGAGAAATTGTTGGTATGAAGGCCTAACTTGGAAGGTTGCTGATGAACATAAATTGTTACATGTAGGAACTAAAAGACTTGAAGGTGAAAGCAGATGGAATCACCAGATTAATGGAGCGAGGTTACAGGGTGAAGGTCAGCTTACATTCCATTTCCCTTTCTTGCTTGTACCACTGTAGAAAAGGTCACTTTGTACAGGCACGTAACCGACTGGTTGCACGTATGTGAGTAGTAAAGCAACCCGAATAAGTGAATCATGACGGATTTTAGGTGTGTGAAATGTTGAAATGGCCTGCTAGCCTGATCAAGTGGCCGATTGCCATATAATCACAGAGTTAAGATGCTTAATTCTCATATTGAGCCTAGCAGTCCAACTAGGATAATCCGTATATAATATCTATACTGCTTCCATCATCTTATGAGGGTAACCACATGAGTAGTACAAATATGCTTTTTAATAATTACAATTGAATGTGTTCAAATGTCTCTAAGAGCAAACAAGCACCAAGTATATAGATTCATTAGCATGAACATTAAATTATCCATATAATTCTGAATAGTCATCTGTATTCCGACTTATCACTTGATGGTACCTTGTCCATCCGATACGCGTATCCAGACTTATACAACACTGGTTTGTACAGCTCTGCCAATATTTAGTGACAATTCATGCAGTTTCTGTTAGCATCATCTTATGCTTTGCTTTGTCTTTTTTTACTATCATTTACTCCCTCCTTCCCAAATTGATCATCATCTAATGGACTTCAAAATTTCTCAAATTGATCATCATATAACCGCATGGACATGGATTTCATCATAATACAATTAATGCAGCATGAGAGAATGTGTGCATGCTAAGGTGTAATTGGCATGGTGTTTTGATCGATGCATGCATTGTGGGAGAATGTGTGCATGGTTGTCTTGATTGATGTGATTTAAATTATCCTTGGTCTTGGTGCATAAACATATACTCCCTCCATCCCATAATATAACGCATGGTAAAAGTTACACGGTCTCCAAAACTAATCTTTAACTTATAATTTCTCATATGCTATAAGGTTTGTAGCAACAAAATTATAATCATATGAAAGTAAATTTAAATGTCAATCTAATGATATAATTTTTAACAAATAAAATTCATTTCATATTATATTAAATGTTGGTCAAATGTTTTAAAGGTTGAATCTTGAAATACGTGCACACCTTATATTATGGGATGGAGGGAGTATGATGATCATTTTGGGAAGGAGGGAGTATATAATTACTTTTTGTCATCAGAGGCAACAGCTGTCGGTTTTCTAGTCAAATATTGCTTTGTAATTTTCAGTAGACGATTATCTGAGAAAAATATGCCAAATGATGGGAAATGATGAGGGAGCTTTGCTGAAGAGTAGCGATTCTTAAGTACATTGTTCTCCATCTAATATGTCACACTATTGCATTTTGACACTAGAGAGTTGCTCCACTGGTCATGTTTGCTTAGATATTGCCACCAGGAATGTGGTAGGTGGTGCAAAATGCACAAGCTGTAAATCTCACATGAAAAATCAATGGTTTGGGTTTGGGTGAAGAGGTCGTACCAGGTGGTAGAGATCATCCAGGTTGAGAGGATGGCAGCTGTAGAAGTTATGTCGTTTGCAGACTTTTACCTGTTTCAGTAATAGATGCATGATTTGTTTTGGAGTAGAACTTATGTCTTTGTTGAGTGTAGATCAAATTCCTAACCGGACTGTTATTGATGGTGTGATGGTCATGTACTCATGTTATGCAATGGTTCTAGGAATCCAGATATAAATTTTATTTACTTTTCTATTTGGATGATACTGTGTTTGCATGTAACAGTATTTTCTGTATGTTCTTTCTTTTTCTTGTATAAACCAGTAACAGGCACAAGAACTACAAATTCAGGAGAACTTTCTTCCTCTTCTTAGGAAAAGGCCCTGCTGTCTCTTGTCTAGTTTGATCAAGAACAATAGCAGTTGGAATTGAACTGAACATGGAGAATTATAAGAAAGTTTTTTTTTTCTTTGGTCTCTATTTCAAGCAATGAGAACCTGAAGGATTTTGGTCTAATTTTTGCCTGATTTACTATATTAGCGCATTCTGTGCAACTGTCACCAACATTCATATATCCAATTTTAACTTGAACTTCAGTTCTGAATCAGTTAATTTCAGCTGTCTTTTATTGTAATTTTTGTGCATGTTCATATGCATATGCATTTATTTGTTATAAGGTCTTGAATACAAACTCTAAAATTATTTTAAATGTGTTCCTATTTGGCAGTGCATGGCGATGCCCTCAGGTAATGAAGAAGAAGATTTAGGAGGGCCACTATCTCGGTTGTTAGGACTTGTGAGTGCTCTGCTCCTTATTATTTTCATGTTGCTTGCAACCAATGTCAGCAAATTCTGTTTGACAACTGTTTGATGTCCTGGTTACATTTTCGGAGCTGTCCGTAAAATGATCTTTTTATATGATGTCGTAAATTGAACAGATACAAGATGTCTGCATAGTGGAAAGTGGCCCACATTTGGACTCGAAGCATGCATACGTTATTGTTAGGCATGTGAAGTTTGCAACAAAGAAAGCTGGAAAGAAAGCTAGCAAGGCCATAGAAGATGTAGGCAAAGGTGCCCGCAAGAATGCCTCTGAATTGTCAACTGTTACTGCCGATAGTGGAGATGAGACAAATGATTGTGGAAATGGGGCCATCTCAGATCAAATGGACAACGCTCCTGCTTACGTCTCCAATGAATTTTCCATGCAGAAAGATGCACATGATAGAGGCTCTAGAAGGGAGTTGAGTTGGTCGAAATCGAACCCGGGCAACTACGGTGAAAACATGCAAAATGTTGATGCTGGGGCACACAGAATTAGCTCTAGTCAGCGGGCAGCACAAACCTCAGAGGGTGGGTTTGGTTCCAATAATGTAAAATCTGGTATGGAAAAGCAAGAAAAGGCTAATGAAGATGTGGTACCTGCAGAAACCAACAGATACGCCAGCCGAAGACAGCAGATAAGAGGAGATAACCAGGGTTTGAGCCAAGATAGATCCCCGCAAGGTCATAGAAGGAATGAAAATGAAGTTCGCTATCCGGTCAATGACTACCAAAGACCTCTGCAGCAGAACAACCGACAATCACCAAGGTTCAACGATGGTAGATTACCACAAGAACCAAGAAGAAATGAAAGGGGAGGCCATATTCCGTTGAATAACAAACAAGGCCAATTTCAGCAAATGAATCATCCTGCTGAATCAGCGGGTAATGGTGCAGGCTATCCTACTCCGACGGCCAAGAGTTTTGGAGTTTTCAGTACCAGAAAACCTGCTACGTCTGAGTTGGGGAAAACAAATGGTGCTAGTAGGACTGCTAATTCTGATGTACCTAAAAGCTATGGAATCTTTAGTTCTCCTAGAAGGGAATCTGGTGATAAAAGCTCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007323