BGIOSGA007330

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Revision as of 02:55, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007330| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007330, complete gene.| tag = B1370C0...")
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Gene Name

BGIOSGA007330

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007330, complete gene.

LocusTag

B1370C05.34-2

Ensembl Transcript ID

BGIOSGA007330-TA

Ensembl Protein ID

BGIOSGA007330-PA

Length

5531

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:146177..151707

Sequence Coding Region

146177..146509,147479..147553,147698..147751,147801..147905,148253..148353
,148454..148509,148801..148841,148944..149044,149146..149241
,149421..149485,149564..149635,149795..149950,150053..150288
,150390..150420,150536..150681,150780..150881,150985..151029
,151117..151257,151330..151707

Genome Context

<gbrowseImage1> name=IndicaChromosome02:146177..151707 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:146177..151707 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGCTGAGCTCGTCGGCGTCGAGGCGGGAGGCCGGCGGCGGCGGCGCCGCCTCCAGCACCAAGAGCGGCGAGCTGTCCCTGTCCAAGGTGGCCAGCGTGGCCATACGGGAGTCGTCGGGCTCGGGCGGGATTTCCAAGAGCAGCGAATTGCTGCCGAGGGCAGGAACCATGGCGGCGGCGAGGGAGGCGGCGGCGGCGGCGGTACACCACGAAGGATGGATGGTGCGCTACGGCCGGAGGAAGATCGGCAGGTCCTTCTTCCACACCCGCTACTTCGTCCTCGACAGCAGGCTCCTCGCCTACTACAAGAAGAAACCCAAAGACAACATGGTGCCACTAAAATCGCTGCTGATAGACGGGAATTGCAGGGTGGAGGATAGAGGACTCAAAACACATCATGGACAAATGGTCTATGTCCTGTGCGTTTATAATAAGAAAGAAAAGGAGCATCAGATCACGCGTTATATCAGTATATATATGACTAGATTTAATTCGCAGATGGGCGCGTATGATATTGAGGATGCTCTGGCCTGGAAAAAGAATATAGAACTCATTATCGATCAGCAGCAAGAAAATATGACCTCCAAAAACCGCAAGGCCTTTGCTTCAATGGACTTTGATACGGAACTAGGAGGGCAGTTTATATTCTCAGACCATGACAGCGCAGCTGAAGATGAAGAGGAACGACCTATGTTGATTCGCAGGACAACTATAGGGAATGGACTACGCATCTTTGAAGAACTTCTGGAATTCGATTATCTTGCAAGAAGCTGTAGCAGAGCTATGCGAGCTGTTGGTGTTGTGGAAGCCACATGCGAAGCCATTTTTGGGCTGGTGATGAGCATGGATGTAACAAGATATGAGTGGGACTGCAGCTTTCGCTATGGTAGTTTAGTTGAAGAGGTTGACGGCCACACCGCTATACTGTATCATAAGTTGCAGTTGCACTGGTGCCCAATGTTAGTATGGCCTCGAGACCTATGTTATGTTCGCTATTGGCGGCGTAATGACGATGGAAGTTACGTTGTGCTGTTTCGATCTACAGAGCATCCAAACTGTGGGCGTCAAAAAGGATATGTGAGGGCTTTTATTGAAAGTGGAGGTTTCAAGATTTCTCCTCTCAAGTGTCGCAACGGAAGACCCCGCACTCAAGTTCAACACCTAATGCAGATTGATCTCAGGGGATGGCTCCTCAACTACTCTCCTTCCTTTCAGTATCATTCTTTGCTGCAGATACAAAACTGTGTAGCCGGCCTACGAGAATACTTCTCCCAAACAGACGAAACACATATAACTCCAAGGATTCCTGTGATGGAAAACATGGTTGACACATCTGCAGTACAGAAAGATGACAAGAAGAGTACCGAAGAAGTAGACTCCAAGACTAAAACACCAGATCGAGGACAAGCGGACAGTAAAAACATGGGAATCATTGATGAAGAAACAGACGAGGATGAGGACTATCAGGTTCCTGAAGCTAACATAGAGGAAGATCCTAACAAAGATGCTAAGCGTGCAGACGAACCACCAGAAAAGATTGATCTATCATGCTTTTCGGGCATTCTTCGTTGCGATGCGGATGAGAAAAGCCGAAACTGTTGGACAGTACCTGACAGCAAGCTGTTTAAAGTCCGTAGCAAGAACTTCCCGCATGATAAATCAAAGATACCTGCAGCGAGTTACCTGATGGAGCTTGCGGCCATTGACTGGTTTAAGGACAGCAAGCGTATGGATAACGTAGGCAGGCAGAAAGGCTGTGTAGCCCAGGTAGCTGCTGAGAAAGGGATGCATACATTTGTTGCCAACATACAGATCCCTGGATCAACTCATTACAGCTTGGTGATGTACTTCGTGACAAAGTCGCTGAAGAAGGGATCACTGCTGCAGCGATTCTTCGATGGGGATGATGAGTTCCGCAATAGCAGGCTGAAGCTGATACCCTCTGTACCCAAGGGATCATGGATAGTGCGGCAGAGTGTAGGGAGCACGCCGTGCTTGCTGGGGAAGGCGGTGGATTGCAGCTACGTGCGTGGAGCCGGATACCTGGAGGTGGACGTCGACATTGGGTCGTCGGCGGTGGCCAACGGGGTGCTGGGTTTGGTGTTTGGTGTGGTGACGACGCTGGTGGTGGACATGGCGTTCCTAATACAGGCCAACACCTACGAGGAGCTCCCCGAGCAGGTCATCGGCGCCGCCCGTCTCGCTCACGTCGAACCCGCCGCCGCTATCGTCCCCCAGGACCTTACTCCCCCTCCTCCTGCCCTTGCCGACGACGACAACGCCGCTGCTTCTTCCTCCGAGGATGATCATTTGTCCAAGAAAACCAACTAA</cdnaseq>

Protein Sequence

<aaseq>MMLSSSASRREAGGGGAASSTKSGELSLSKVASVAIRESSGSGGISKSSELLPRAGTMAAAREAAAAAVHHEGWMVRYGRRKIGRSFFHTRYFVLDSRLLAYYKKKPKDNMVPLKSLLIDGNCRVEDRGLKTHHGQMVYVLCVYNKKEKEHQITRYISIYMTRFNSQMGAYDIEDALAWKKNIELIIDQQQENMTSKNRKAFASMDFDTELGGQFIFSDHDSAAEDEEERPMLIRRTTIGNGLRIFEELLEFDYLARSCSRAMRAVGVVEATCEAIFGLVMSMDVTRYEWDCSFRYGSLVEEVDGHTAILYHKLQLHWCPMLVWPRDLCYVRYWRRNDDGSYVVLFRSTEHPNCGRQKGYVRAFIESGGFKISPLKCRNGRPRTQVQHLMQIDLRGWLLNYSPSFQYHSLLQIQNCVAGLREYFSQTDETHITPRIPVMENMVDTSAVQKDDKKSTEEVDSKTKTPDRGQADSKNMGIIDEETDEDEDYQVPEANIEEDPNKDAKRADEPPEKIDLSCFSGILRCDADEKSRNCWTVPDSKLFKVRSKNFPHDKSKIPAASYLMELAAIDWFKDSKRMDNVGRQKGCVAQVAAEKGMHTFVANIQIPGSTHYSLVMYFVTKSLKKGSLLQRFFDGDDEFRNSRLKLIPSVPKGSWIVRQSVGSTPCLLGKAVDCSYVRGAGYLEVDVDIGSSAVANGVLGLVFGVVTTLVVDMAFLIQANTYEELPEQVIGAARLAHVEPAAAIVPQDLTPPPPALADDDNAAASSSEDDHLSKKTN</aaseq>

Gene Sequence

<dnaseqindica>1..333#1303..1377#1522..1575#1625..1729#2077..2177#2278..2333#2625..2665#2768..2868#2970..3065#3245..3309#3388..3459#3619..3774#3877..4112#4214..4244#4360..4505#4604..4705#4809..4853#4941..5081#5154..5531#ATGATGCTGAGCTCGTCGGCGTCGAGGCGGGAGGCCGGCGGCGGCGGCGCCGCCTCCAGCACCAAGAGCGGCGAGCTGTCCCTGTCCAAGGTGGCCAGCGTGGCCATACGGGAGTCGTCGGGCTCGGGCGGGATTTCCAAGAGCAGCGAATTGCTGCCGAGGGCAGGAACCATGGCGGCGGCGAGGGAGGCGGCGGCGGCGGCGGTACACCACGAAGGATGGATGGTGCGCTACGGCCGGAGGAAGATCGGCAGGTCCTTCTTCCACACCCGCTACTTCGTCCTCGACAGCAGGCTCCTCGCCTACTACAAGAAGAAACCCAAAGACAACATGGTACCCGCCCTAACTCCATCATCATTCATTAATCAATCAATTATTACTACTCGTACTAATTTCAAACACTCTTACTATCACTGCCTTGTTTTAATTTTCCTTCCCCTGGCATACGCTTGTCTGGCCAATTACATTGTGTAACAAAAAAAACTCTTTTCATTCTAATATATTGATGCGTTCGTGAAAAAAAACACTCTTACTATTACACATTTGCACTACTACTCATAGTAAATTCAAACACACACACACACACACACACACTATATATATATATATATATATATATATATATATATATATATATATATATATATGGCACCAAAAATTAAATATGCATTAATTGAGTCATATCATCTAGAATATAGTAGCCTTTGGATCTTTCTTATGCTTTGATCTCAACCATCCATTTACATATGCATTTACAACCCACTAAATACATAGTTATTAGTATAAAATTCAATGTGCATTAAACCATAACATCTACAAAACTAATAGTCATTGGATCTCTCTCTCATATTTGATACTCCCTCCATCCCTAAATATTTGACGCCGTTGACTTTTCTTTTTAAACATGTCTGACCGTTCGTCCTATTCAAAATCTATTGTGAAATATGTAAAACTCTATATATACATAAAAGTATATTTAACAATAAATTAAATGATAGAAAAAGAATTAATAATTACTTAAATTTTTTAAATAAGACGAACGGTCAAACATGTTTAAAAAAGTCAACATTGTCAAATATTTAGATATGGAGGGAGTATATAACTATCCCAGCTGTCATGTAAAATTGAAATTTATAATCAACTACTATTGAGCAAATATTCTCTATTTACATATTATAAGTACTTGATTTACATATTGCTTTCTTTTAATTTTCTATAAAGTATTTTTAAATTTCCCGCTGCAATGCGCGGGATATGCACTAGTTATATGTAATAATGTTGTACATGCATATATCCATGCAGGTGCCACTAAAATCGCTGCTGATAGACGGGAATTGCAGGGTGGAGGATAGAGGACTCAAAACACATCATGGACAAGTATCCATTATTTCTTCTAATTTATCTCCTTTCCGTACCATCCTTCTTCTCATGATATACTGTATCAACCAGCTGGCTTTTACACCTGACATTGCCCCCGTCCTTCTCAATTGACGATGTATCATAATGATCCTTAATTTTCAGATGGTCTATGTCCTGTGCGTTTATAATAAGAAAGAAAAGGAGCATCAGATCACGGTTTGTTCTAACTAAACCTGACTGCATGTTCTCGATCTCTTTCATTCAGCGTTATATCAGTATATATATGACTAGATTTAATTCGCAGATGGGCGCGTATGATATTGAGGATGCTCTGGCCTGGAAAAAGAATATAGAACTCATTATCGATCAGGTGCAGTAATTTTTCTTCATCTTACAGTTTTGACTTTGCATATGTAAACACAACAAGTAATTTTGGAGTACTGGATAATTCTCAAATTTCAATGAAAATCCATTTTCATGTCGAATCATCTAATACCCAAAATATGTGACTCTTAGACCGTCCAGCTGCCTTATTCAGGATTTTCTAATGAATTAAACCGAACAAGGACCTTTGTACGTACTGTTTAAAGGGTAGTTAATTTGGGCTGGCAGAACTTTAGGTGTACTCTTTACGGATATATGTAGTAAATTAAGCTGCAAAACAATATGGATGCTCCATGTTGTTTTGTGAAGTATCACATCTTCACATTGTTGCAGCAGCAAGAAAATATGACCTCCAAAAACCGCAAGGCCTTTGCTTCAATGGACTTTGATACGGAACTAGGAGGGCAGTTTATATTCTCAGACCATGACAGCGCGTAAGTGACATCCCATCTTCTCTCCTAAATTATCTTACAAACGACAAACAAACAAGATCTGAAATAAGCTGAAATATAATTTCACTACGAATATATGCAGAGCTGAAGATGAAGAGGAACGACCTATGTTGATTCGCAGGACAACTATAGGGAATGGTAACAAGTTATCTGCAAGTTTTGTTCTTAATTTCCGTTTGTGGATCGATATGCTACAGAAATTCACCACCTCATTTCTGGTGTGCTAGGTCCCCCTGAATCAATACATGACTGGACCAAAGAGCATGATATCGGTCCACCCAATCAGATTGACCCCATTCAAGTTAGCTCCAAGAAGAATTGGCGCCTACTTAGATGCCAAAATGGCAAGCACACAAGACTGCTCCTCCTCCTCCTTAGGTTATCAGTCAATACTTGTCTACTTGTTGCTTACTTCCTTGTCATTCGCAGGACTACGCATCTTTGAAGAACTTCTGGAATTCGATTATCTTGTATGTCCAGTCTACTCACTCTCGACTACTGCTAGACAGTTAATTGATTAGATACTATGCATCTTCTGAAATTCTTGATGATTTTTCACTTGTCCTGTGTAGGCAAGAAGCTGTAGCAGAGCTATGCGAGCTGTTGGTGTTGTGGAAGCCACATGCGAAGCCATTTTTGGGCTGGTGATGAGCATGGATGTAACAAGATATGAGTAAGCATATTTACTACTATCACCTATATATATTCCTACTACAGTTACATATTAATCTTGAGATTACGTACTGATGTTTAATTATTGATCATCACGTATAGGTGGGACTGCAGCTTTCGCTATGGTAGTTTAGTTGAAGAGGTTGACGGCCACACCGCTATACTGTATCATAAGTTGCAGTTGCACTGGTGCCCAATGTAACTAGTCTTCTTTCTTGTCCGTAGCATTTTCAAACATCCTCCTCCTCCTCTTCTTCTTTTTTTTTTGGAGAAATTTCCTCTTATTTTTGAGTGCACAACTAAATGGTAGTACTAATATTTCGGATTATCTATCAGATTGAAACTTACACATTCTTCCATTCTACATGAACATGCAGGTTAGTATGGCCTCGAGACCTATGTTATGTTCGCTATTGGCGGCGTAATGACGATGGAAGTTACGGTAAAAATATTCAAATCTTTTCCATGGAATTTGCTGTTTTGTAGAGCAATTAATTTCTGATTGTTTGTTTGGACGCAGTTGTGCTGTTTCGATCTACAGAGCATCCAAACTGTGGGCGTCAAAAAGGATATGTGAGGGCTTTTATTGAAAGTAAGCTTCTCTCTGAGCATCTGAAATCCTGCATTAATTTACCTGCTGAGATCGATCAGGACAGGAGGAGGAGAGACAGTATACTAGTTCCATAGAAAACAGAGAGAAATAAATGTCAAATGAAGTTCCTTTTCTTTTCTGAAATTCCTACTAGTTCAGGTGGAGGTTTCAAGATTTCTCCTCTCAAGTGTCGCAACGGAAGACCCCGCACTCAAGTTCAACACCTAATGCAGATTGATCTCAGGGGATGGCTCCTCAACTACTCTCCTTCCTTTCAGTATCATTCTTTGCTGCAGATACAAAACTGTGTAGCCGGTACTAACTACTGCCACTGCTCGAAACTTAGTTTGCTCAAATGAATTAGTGCCATCATCTTACTACTTCACTGTTATCCTAATTAACTCTACTTACTTCAAGGCCTACGAGAATACTTCTCCCAAACAGACGAAACACATATAACTCCAAGGATTCCTGTGATGGAAAACATGGTTGACACATCTGCAGTACAGAAAGATGACAAGAAGAGTACCGAAGAAGTAGACTCCAAGACTAAAACACCAGATCGAGGACAAGCGGACAGTAAAAACATGGGAATCATTGATGAAGAAACAGACGAGGATGAGGACTATCAGGTTCCTGAAGCTAACATAGAGGTGCTTCATGGCCAATATATAACATTACATATGAACAGTGAATGAGTTTTTTGTGTTTCCTCATTCTAACTAAACTGTGATCAAAATTAATTAATGTGCAGGAAGATCCTAACAAAGATGCTAAGCGTGCAGGTATGATTCTTTTTTTTTTCTGCAATTTATTTTGGTATTAATCTGGTAAGTTCCATAGGCAATCATATATTCTTCCCCTGTAACAATGACACGGTTTGCCTTGTGATTATGGCAGACGAACCACCAGAAAAGATTGATCTATCATGCTTTTCGGGCATTCTTCGTTGCGATGCGGATGAGAAAAGCCGAAACTGTTGGACAGTACCTGACAGCAAGCTGTTTAAAGTCCGTAGCAAGAACTTCCCGCATGATAAATCAAAGGTCCAAGCTTTTATTGCTTAATTTGTTTCTTTGGAATTGAATCCAGTGAGTGAGATTATATGAAGAAGCTGAGCACACTGCTCACATTGAAATTACAGATACCTGCAGCGAGTTACCTGATGGAGCTTGCGGCCATTGACTGGTTTAAGGACAGCAAGCGTATGGATAACGTAGGCAGGCAGAAAGGCTGTGTAGCCCAGGTAAACATAATAAATCTTGTGATCGATGATGGCTTATCCTATCTGAAGTTATCAAGTAGTATCATCACAGAACTTGGCGGCTTGGTCGATGTTTGTTTTGTAGGTAGCTGCTGAGAAAGGGATGCATACATTTGTTGCCAACATACAGGTATGTATGTTTGCAGATTCAGAGCTAGCTAGCTAGCTAGGAGGAAACATTGGCAATCAAAGTTATAGTTATGGGTGTGTGTTGTAGATCCCTGGATCAACTCATTACAGCTTGGTGATGTACTTCGTGACAAAGTCGCTGAAGAAGGGATCACTGCTGCAGCGATTCTTCGATGGGGATGATGAGTTCCGCAATAGCAGGCTGAAGCTGATACCCTCTGTACCCAAGGTAGGTAGTCCAGCTGTTGGTCTCAGGTAGTGAACTGTTGGTCTCAGGTGGTGGGGTGGGGTGTGCCCGCAGGGATCATGGATAGTGCGGCAGAGTGTAGGGAGCACGCCGTGCTTGCTGGGGAAGGCGGTGGATTGCAGCTACGTGCGTGGAGCCGGATACCTGGAGGTGGACGTCGACATTGGGTCGTCGGCGGTGGCCAACGGGGTGCTGGGTTTGGTGTTTGGTGTGGTGACGACGCTGGTGGTGGACATGGCGTTCCTAATACAGGCCAACACCTACGAGGAGCTCCCCGAGCAGGTCATCGGCGCCGCCCGTCTCGCTCACGTCGAACCCGCCGCCGCTATCGTCCCCCAGGACCTTACTCCCCCTCCTCCTGCCCTTGCCGACGACGACAACGCCGCTGCTTCTTCCTCCGAGGATGATCATTTGTCCAAGAAAACCAACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007330