BGIOSGA007341

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Revision as of 02:55, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007341| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007341, complete gene.| tag = OJA1212...")
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Gene Name

BGIOSGA007341

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007341, complete gene.

LocusTag

OJA1212_C06.23

Ensembl Transcript ID

BGIOSGA007341-TA

Ensembl Protein ID

BGIOSGA007341-PA

Length

5668

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:279541..285208

Sequence Coding Region

279541..279576,279793..279895,280621..280694,280778..280875,281153..281193
,281791..281846,281968..282042,282175..282267,282400..282648
,282728..282800,283427..283512,283599..283684,283813..283888
,284026..284093,284176..284242,284312..284407,284483..284585
,284956..285051,285138..285208

Genome Context

<gbrowseImage1> name=IndicaChromosome02:279541..285208 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:279541..285208 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTGCGGCGCACCTCCTCCGCCACTCCCGCAAGCTGCGGACTCTACGTGATGCTCTAGATTATGATCGGTCTGCTCTTGTACGCTACTTCTCCGCTGCTTCTGCATCCTTTCCCACAACGGGAGGTGCTGCTGCTGGTGTTGAGAAAAGAATTGGTGGCGCCAGATTCCCTCAGTGCAAGCAGCCTGGGAAAGAGCTTGAGACCTTCAAGGTGTCACTAGGAGGACTAAATGGAAGATATGCTTGTAGAAGAGCACCTAACAATTGTATCCCAACCACTATTACCGGTCTCAACGGTTCATTGTCATGTGGACAGGTGTCTTCAGCAAGATCTTTCTCAAGCAGTGCAGACCTGCCACCACATCAGGAAATTGGGATGCCATCACTCTCTCCTACAATGACTGAGGGGAACATTGCAAGGTGGCTGAAGAAGGAAGGAGATAAGGTCTCACCTGGTGAAGTTCTCTGTGAGGTGGAGACGGATAAAGCCACTGTAGAGATGGAGTGCATGGAAGAGAGCTATCTCGCTAAGATCATTCATGGAGATGGTGCCAAAGAGATCAAAGTTGGTGAGATCATTGCTGTAACTGTGGAAGAAGAGGGTGACCTTGAGAGGTTTAAGGATTATAAACCTTCAACTTCAGCTGTACCTGCAGCCCCTTCTGAACTGAAGGCTCAGCCTGAGCCTGCAGAGCCAAAGGTGAAGGAGACAGAGCCTTCCAGGATTCCTGAGCCGAAAGCCCCAAAGACTGAAGAAGCTTCTCAACCAGGGGGTCGAATATTCTCCAGCCCTCTTGCAAGAAAATTGGCAGAAGATAACAATGTTCCACTGTCAAGCGTAATGGGAACTGGTCCTGATGGGCGAATTTTGAAGGCGGACATTGAAGATTACTTGGCTTCTGTAGCAAAGGGTGGCAAAAGGGAAGCTCTTGCGGCTCCAGGGTTAAGTTACACTGATGTTCCTAATACTCAGATAAGAAAGGTTACTGCAAACCGCCTGCTAAGCTCTAAACAAACTATTCCTCATTATTACTTGACAGTTGACGCCCGTGTTGATAAACTTATCAAGTTGCGAGGGGAACTGAATCCGTTGCAAGAGTCATCTGGCGGTAAGAAGATATCTATTAACGATCTTGTTATAAAGGCTGCAGCTCTGGCTCTTCGAAAGGTCCCTCAGTGTAATAGCTCGTGGATGAGTGATTTTATCCGCCAATACCACAACGTGAACATCAATGTTGCTGTACAGACTGAGCATGGGTTGTTTGTTCCAGTAATTAGGGATGCAGACAAGAAGGGACTTGGTACAATTGCTGAGGAGGTGAAGCAGGTGGCTCAAAGAGCAAGGGATAACAGCTTAAAACCTGAAGATTATGAGGGAGGCACATTCACCATATCAAACCTAGGAGGTCCTTTCGGAATCAAACAATTCTGTGCCATCATAAATCCTCCTCAGTCAGCAATCTTGGCCATTGGTACTGCTGAGAAGAGGGTGATACCTGGCAGCGTAGACGGCCAGTATGAGTTTGGTTCCTTCATGTCGGCAACAATGAGCTGTGATCACAGGGTTATTGATGGTGCTATCGGCGCAGAATTTCTGAAAGCATTCAAGGGCTATATCGAGAATCCAAACTCAATGTTACTGTGA</cdnaseq>

Protein Sequence

<aaseq>MSAAHLLRHSRKLRTLRDALDYDRSALVRYFSAASASFPTTGGAAAGVEKRIGGARFPQCKQPGKELETFKVSLGGLNGRYACRRAPNNCIPTTITGLNGSLSCGQVSSARSFSSSADLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEESYLAKIIHGDGAKEIKVGEIIAVTVEEEGDLERFKDYKPSTSAVPAAPSELKAQPEPAEPKVKETEPSRIPEPKAPKTEEASQPGGRIFSSPLARKLAEDNNVPLSSVMGTGPDGRILKADIEDYLASVAKGGKREALAAPGLSYTDVPNTQIRKVTANRLLSSKQTIPHYYLTVDARVDKLIKLRGELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSSWMSDFIRQYHNVNINVAVQTEHGLFVPVIRDADKKGLGTIAEEVKQVAQRARDNSLKPEDYEGGTFTISNLGGPFGIKQFCAIINPPQSAILAIGTAEKRVIPGSVDGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGYIENPNSMLL</aaseq>

Gene Sequence

<dnaseqindica>1..36#253..355#1081..1154#1238..1335#1613..1653#2251..2306#2428..2502#2635..2727#2860..3108#3188..3260#3887..3972#4059..4144#4273..4348#4486..4553#4636..4702#4772..4867#4943..5045#5416..5511#5598..5668#ATGTCTGCGGCGCACCTCCTCCGCCACTCCCGCAAGGTTCCTTCCTCTCCCTCTCCCCTCTCCTCCATCTCTTGTTTAATTCTCCGCAGCATTCTCTCATCCCAACACCGAACGCATCTTGTTCCGATCTGTCGTGCTTGTGCCATTCCAGGTCGATCGGAACATCACCAGATTCCCTTCAGATTCCCAATCTAATATTCCTACTGCAGATGGCTCACATTCTAATCTACTGCTCTCACTTTTGTACTGCAGCTGCGGACTCTACGTGATGCTCTAGATTATGATCGGTCTGCTCTTGTACGCTACTTCTCCGCTGCTTCTGCATCCTTTCCCACAACGGGAGGTGCTGCTGCTGGTATGTGCTGTACTAGTAGCCTTTTTCTCTTTTTCTCAATTGATTTACTGGAGTATATGCATGCAATCTGTTTGTTTGTTTGTTTGTTTGTTCAACCAATCTGGAGATGCCCTTTCACATTACTAATTTTCTGTGCTCATTATTTATTTCTCTTGTTTAATTGTATCTTCTGTTTGTAATCTATGTAATTCTGCTGCGGCTGTGGTCACTGCTTATAAGTCCTGCATTGTCATCATCGTTCAAACTGATGTGGTGCTTTGCACTCTCACTTCAATTTAATCAGAATACAACTTTTGTATCTTGTATCAGTTATCCTGGATCCTCCAGAGGTGCTTCTTCTTTTGCACCTACATATTATCAGTTTCACAAGAATATGGGGCATTCATCAATTATGTATTCTGGACTGTAATCTAATTAATATAGGCAAATTATCAATTGTTTACACTAAAATCTGTACAAACAAACTATTTTAACACAAGCACAATGCTTTCTCATCTTTTTTACCTCTCCACTCCGTTATTTTCCGTACCTTCGACCAAACATGTTTTGGCTTCCTGAGCCAATATCATCATTTTTATTTATTAAGGTGTCATTTGCCGTTGACTTTGTTTAACTACGCTCATATCCTCCAGTGCAGACAGCAGCTATTTTTGTCACGTGGCAGCTTATTTTTACAGAGAGAAGTTTCTGTTGTTCATTGTCACCCGTGCTTTTGGTTTCTGCAGGTGTTGAGAAAAGAATTGGTGGCGCCAGATTCCCTCAGTGCAAGCAGCCTGGGAAAGAGCTTGAGACCTTCAAGGTTATGTTCATGAAAAATCATCCGCATTCTGAGATCCCTATTGTCATATCCTGATTGTCTAGTTTGTCATTTTATCTTTTCAGGTGTCACTAGGAGGACTAAATGGAAGATATGCTTGTAGAAGAGCACCTAACAATTGTATCCCAACCACTATTACCGGTCTCAACGGTTCATTGTCATGGTATGTTTTGTTTTCTGCTATGCTATTGTTAGCTTATATGGCTGTGTAGGAATATATTGAATTAGAGAACCACCCTTGAAACAAGAGAATATGAACTAGTAATACTTGAACATTGAGCTAAGACAAACCATAAAAAAATTACTGACATCTTCTGTAAGGCCCCTGAGATATGCCTCTCTGCTCTTTAGTGCTCTTTTACCAGAAGAAATGACCCCATGACAGTTCTAATTTCCATTGCATCTTGGTAATATTCCTCTTTTCCTGTTTCTTTTCCCAGTGGACAGGTGTCTTCAGCAAGATCTTTCTCAAGCAGTGCAGGTACTTATCCCAGCAGTTAGTTAGTCTTAAGTGGGTTTATTGGTTGGGCCTCACTTATGTGTGATGCTTTTTGGGAAGTGTTCTTGGTGGGAGGGGTTCCTTGACCCTTTCTTTATAAATATTTCTCTCTTCTTAATGAAATGAAGCGCAGTTCTCCTGCGTTTTTTGGGGGAAAAAAACAGGATATCGCATAGCAGCTCCTCAGTTTTTTATTGATCTTTTTTGCACTTATCTACAATGTTGTTTTTTTGCCATCCTTCTTTTTGTTCTATTATTTGCTTCACTTTATCCCGTCTTCCCATGTACCAATTGTTTCATGCATGTGATCCTCTATTCTGCTACTTTTTTTTGGATATTTTTCTCCACATCTGTATCTCCGTTGAATTTTCAAAACTTTTTTTTTTGTATGTGTTATATAAGCATTTAGGTTATTTGCTACAAAATAAGTATATCCCAAACTCACACCACATCTCCCCATTGTTTTGGTTACTATGTTAAAATTTTCTATGTAACTCCAATCAATGGTTCCTTACAGAGCATGTAAAGTAAGGTCCTCTGTTAGCTCTCTTAATTCTTGACGCAATTTGCTTATTCCAGACCTGCCACCACATCAGGAAATTGGGATGCCATCACTCTCTCCTACAATGACTGAGGTATCTGTTATGCAAAAAAAAAAAAAACCGTTGCTCCTTATCTGTATTTCTTGAATTGCATCCATCGGTGTTACACCTTTAACACCAGAAGTATTACACCTTACACTTGTATTGTCTGTAGGGGAACATTGCAAGGTGGCTGAAGAAGGAAGGAGATAAGGTCTCACCTGGTGAAGTTCTCTGTGAGGTGGAGACGGTAAGTTTTCTAATATGTAAGGCTACATGCCATATATTGTTTAGATTTATTTTTAGTTATGCAGTTAGCCAGTTACTTCTATTAAGCTGCAGTAGAAGCTAAATATCCTTTGAATGCATTCCTGCTGACTAGGATAAAGCCACTGTAGAGATGGAGTGCATGGAAGAGAGCTATCTCGCTAAGATCATTCATGGAGATGGTGCCAAAGAGATCAAAGTTGGTGAGGTAAAAATTTACTGATCAAAGAACAACCAATTTATGACTCTCATTTTACTAATATGATTATTACAGTTGCCTCTGCCTATAAATTTTTCTGACGTAATCTTGGTTGATTTATGGCCCCACTGTTCCTTTTAGATCATTGCTGTAACTGTGGAAGAAGAGGGTGACCTTGAGAGGTTTAAGGATTATAAACCTTCAACTTCAGCTGTACCTGCAGCCCCTTCTGAACTGAAGGCTCAGCCTGAGCCTGCAGAGCCAAAGGTGAAGGAGACAGAGCCTTCCAGGATTCCTGAGCCGAAAGCCCCAAAGACTGAAGAAGCTTCTCAACCAGGGGGTCGAATATTCTCCAGCCCTCTTGCAAGAAAATTGGCAGAAGATAACAATGTAGTATTTTTTTCGTGTTAGCTATCTAGGCTATTAATTGGTAGATTTTATTGAATCATACTTAATAAACACAAAACAGGTTCCACTGTCAAGCGTAATGGGAACTGGTCCTGATGGGCGAATTTTGAAGGCGGACATTGAAGATTACTTGGGTATGCCCTTTCTCTTGTCCCCTCCAACCCCCCTAACTAGTTTTATATATTTACCAATGACTATAGATTAATTTATTTTCAACTATATCACTTCCTAGTTTATTTAGAGAAACCGCTGGGGAAGCCCTCATTTTGTAGCTAGTCATGTGTGCTCCTGGACATCTCATGCTAATTCTGAATGGTGGACTCATAATGTCGAATTTTATTGGGGTGTCCTCCCCTTGCCAGCTGTCTTCTTGTTCAATCTTTAAGGCTCAATCACAAGAAAACAAGCTGTATCACTCAATATCTTTGTGGTTGGCTATCATATCCATTCTAAGATAACCATATTCAGATACTATTTGATCACTTAATTCAAATATCCACTGGACCAGTATATCAAGTTTTCAGAAGAAAAAAGAGGCTATTTATCTGACTCAGTTTTGCACTTATGCTTATTTGTGTACACTGTGTTAGTAGCAGCACTAGTTTGATCCAAAGTAATATTAATGTAATTTGCTTGAGCTTGCCAAGGTTCAAGTTAAATGTGTGGCTGTCACTAGCCTGTTATGTATGTCAGATTTGCTGTGCTTTTATTCTGTATGAGAATTCAATCAGCATCTAACTATCATTTTTTATTAACAAAGCTTCTGTAGCAAAGGGTGGCAAAAGGGAAGCTCTTGCGGCTCCAGGGTTAAGTTACACTGATGTTCCTAATACTCAGATAAGAAAGGTAAATTTCAATGATACAGAATCTTGTTAGGTTGATTTTAGCCGATGCTATTGGTCTGATAGTGTATTATCTTCTATTCTTCACAGGTTACTGCAAACCGCCTGCTAAGCTCTAAACAAACTATTCCTCATTATTACTTGACAGTTGACGCCCGTGTTGATAAACTTATCAAGTATGTTGAAGCCTAGCTTTGTAATTTAAAGCAATCCTATATTACATAGGAAACCTATGTAATGATTCAATTCCATACTGCTGGTTTTGTAGCTTTTTAAAATAGTTCTTTATTTCAATCTAATCCAGGTTGCGAGGGGAACTGAATCCGTTGCAAGAGTCATCTGGCGGTAAGAAGATATCTATTAACGATCTTGTTATAAAGGTAATTGCTGTTGTCTTGTTTCTTATGTCTACCAACCATTGAGTTGTCGCAGATTGGGTGTATGATGTATATCAGTTCACAGACTGTTAATTTTCTCCTGACCTCCAGATCTGAATTGATCTTAATTTGATGTGCAGGCTGCAGCTCTGGCTCTTCGAAAGGTCCCTCAGTGTAATAGCTCGTGGATGAGTGATTTTATCCGCCAGTAAGTTGTCATGGAGCATGTATCCTGGGATTAGAATTATGTTGACAAGAAGGTGATTATGGTAAATTTATTTCTCGTGCAGATACCACAACGTGAACATCAATGTTGCTGTACAGACTGAGCATGGGTTGTTTGTTCCAGTAATTAGGGTTAGTAATCTGAACTTGTCTATTTATGAAAAAAAAAACATTGGTTTCTAGCTTGTACCTGTGTTTCAGGATGCAGACAAGAAGGGACTTGGTACAATTGCTGAGGAGGTGAAGCAGGTGGCTCAAAGAGCAAGGGATAACAGCTTAAAACCTGAAGATTATGAGGTATATGGATCGCATGGTAGCTAATATAAGCATGAGACAACATCATTTTTCCTTGAAAATTCTGGTGCTTTTCAGGGAGGCACATTCACCATATCAAACCTAGGAGGTCCTTTCGGAATCAAACAATTCTGTGCCATCATAAATCCTCCTCAGTCAGCAATCTTGGCCATTGGTACTGGTAAGTCATGCTAATATGTTTGTGTAATAATAACGGTAGCATCCTGTATTATCTGCATTTCTTTCTAGTATCTTTTGAGAAGCATATTATCTTTGTTGCCCCATCCTATTATTTTTAAGTCGGGCTTCTACTCAGAAATTTGGCATGATGTTACAGAGTGCCAACTGCTTAGTAGCATTTAGCCTTTTATAAACAGGGCTTAAGCATAGAATTCAAGGTGTAGTAGAGTAGTATCCTTTCGCTTCTGTATTCTACGTTTCTACATTCTAGATAAACTTCTGCTAAGAAGGTCCATTCACGTTGCAGTGTTCTTGTGATGCTTACATAGGGTGTCATTATTTACTTAATGGCCTTTTTTTTGTTTGGACAGCTGAGAAGAGGGTGATACCTGGCAGCGTAGACGGCCAGTATGAGTTTGGTTCCTTCATGTCGGCAACAATGAGCTGTGATCACAGGGTTATTGATGGTATACTCTTAAGCCTTATCTGAATACATGATAGTTCCACGGACCATAGGCTAGAAAATAACTTTGTTCATGTGTGCTTTCTCTAGGTGCTATCGGCGCAGAATTTCTGAAAGCATTCAAGGGCTATATCGAGAATCCAAACTCAATGTTACTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007341